Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1283 Ceratophyllum demersum HOM05D005847 ORTHO05D007143 1.2e-175 619.8 317 100.0
Manes.01G053800 Manihot esculenta HOM05D005847 ORTHO05D007143 9.9e-106 387.5 255 72.9
Nn8g41240 Nelumbo nucifera HOM05D005847 ORTHO05D007143 2.9e-105 386.0 255 74.9
Ciclev10019764m.g Citrus clementina HOM05D005847 ORTHO05D007143 3.8e-105 385.6 255 73.7
TAR629G2252 Trochodendron aralioides HOM05D005847 ORTHO05D007143 1.4e-104 383.6 255 74.1
Atru.chr9.1922 Acer truncatum HOM05D005847 ORTHO05D007143 4.1e-104 382.1 255 73.7
GSVIVG01019613001 Vitis vinifera HOM05D005847 ORTHO05D007143 7.8e-103 377.9 255 74.1
Eucgr.E01030 Eucalyptus grandis HOM05D005847 ORTHO05D007143 1.0e-102 377.5 295 64.7
Ca_24013_v3 Cicer arietinum L. HOM05D005847 ORTHO05D007143 3.9e-102 375.6 251 73.7
CSS0040838 Camellia sinensis var. sinensis HOM05D005847 ORTHO05D007143 6.6e-102 374.8 255 72.9
PGR042G1950 Punica granatum HOM05D005847 ORTHO05D007143 6.6e-102 374.8 296 65.2
FAN08G0147 Fragaria x ananassa HOM05D005847 ORTHO05D007143 7.3e-101 371.3 253 71.1
FAN13G1107 Fragaria x ananassa HOM05D005847 ORTHO05D007143 7.3e-101 371.3 253 71.1
Lj2A159T44 Lonicera japonica HOM05D005847 ORTHO05D007143 1.2e-100 370.5 255 71.4
MBI12_g02092_MAGBIO Magnolia biondii HOM05D005847 ORTHO05D007143 1.6e-100 370.2 255 71.0
RcHm_v2.0_Chr7g0186411 Rosa chinensis HOM05D005847 ORTHO05D007143 1.6e-100 370.2 253 71.1
Thecc.03G224700 Theobroma cacao HOM05D005847 ORTHO05D007143 2.1e-100 369.8 255 70.2
Duzib084G0923 Durio zibethinus HOM05D005847 ORTHO05D007143 4.7e-100 368.6 255 70.6
TWI81G0154 Tripterygium wilfordii HOM05D005847 ORTHO05D007143 8.1e-100 367.9 296 62.5
FvH4_5g11440 Fragaria vesca HOM05D005847 ORTHO05D007143 1.1e-99 367.5 253 70.8
Psat4g194080 Pisum sativum HOM05D005847 ORTHO05D007143 1.4e-99 367.1 251 71.7
Actinidia22190 Actinidia chinensis HOM05D005847 ORTHO05D007143 1.8e-99 366.7 255 71.4
CANSAT21G1860 Cannabis sativa HOM05D005847 ORTHO05D007143 2.4e-99 366.3 254 69.3
FAN04G0204 Fragaria x ananassa HOM05D005847 ORTHO05D007143 2.4e-99 366.3 253 70.0
Lsat_1_v5_gn_6_83620 Lactuca sativa HOM05D005847 ORTHO05D007143 2.4e-99 366.3 255 70.2
Lj1g0001744 Lotus japonicus HOM05D005847 ORTHO05D007143 4.0e-99 365.5 251 71.7
RcHm_v2.0_Chr2g0164461 Rosa chinensis HOM05D005847 ORTHO05D007143 5.2e-99 365.2 253 70.0
CiPaw.11G115200 Carya illinoinensis HOM05D005847 ORTHO05D007143 1.2e-98 364.0 256 70.3
Nitab4.5_0002728g0010 Nicotiana tabacum HOM05D005847 ORTHO05D007143 1.5e-98 363.6 255 72.5
VMungo1127G1163 Vigna mungo HOM05D005847 ORTHO05D007143 2.0e-98 363.2 251 68.9
Glyma.13G191700 Glycine max HOM05D005847 ORTHO05D007143 3.4e-98 362.5 254 70.1
Gohir.A12G238500 Gossypium hirsutum HOM05D005847 ORTHO05D007143 3.4e-98 362.5 255 69.0
MD14G1134800 Malus domestica HOM05D005847 ORTHO05D007143 4.4e-98 362.1 253 70.4
FAN18G1068 Fragaria x ananassa HOM05D005847 ORTHO05D007143 7.6e-98 361.3 253 69.6
Phvul.011G200000 Phaseolus vulgaris HOM05D005847 ORTHO05D007143 7.6e-98 361.3 251 68.1
ECA240G1801 Erigeron canadensis HOM05D005847 ORTHO05D007143 9.9e-98 360.9 255 69.4
Gohir.D12G239600 Gossypium hirsutum HOM05D005847 ORTHO05D007143 9.9e-98 360.9 255 69.0
Cc08_g16520 Coffea canephora HOM05D005847 ORTHO05D007143 1.3e-97 360.5 255 69.8
Potri.001G086800 Populus trichocarpa HOM05D005847 ORTHO05D007143 1.7e-97 360.1 255 68.2
Cfa011951 Carpinus fangiana HOM05D005847 ORTHO05D007143 2.2e-97 359.8 256 68.8
Gorai.008G256700 Gossypium raimondii HOM05D005847 ORTHO05D007143 2.2e-97 359.8 255 68.6
Prupe.5G126500 Prunus persica HOM05D005847 ORTHO05D007143 2.2e-97 359.8 253 69.6
CsaV3_5G001820 Cucumis sativus L. HOM05D005847 ORTHO05D007143 2.9e-97 359.4 255 68.2
Lalb_Chr13g0298981 Lupinus albus HOM05D005847 ORTHO05D007143 2.9e-97 359.4 251 70.1
CAN.G567.67 Capsicum annuum HOM05D005847 ORTHO05D007143 3.8e-97 359.0 255 71.4
Solyc08g082880.4 Solanum lycopersicum HOM05D005847 ORTHO05D007143 3.8e-97 359.0 255 71.8
Sopen08g031110 Solanum pennellii HOM05D005847 ORTHO05D007143 4.9e-97 358.6 255 71.4
Haze_09129 Corylus avellana HOM05D005847 ORTHO05D007143 8.4e-97 357.8 256 69.1
Medtr8g040700 Medicago truncatula HOM05D005847 ORTHO05D007143 8.4e-97 357.8 251 70.1
Aqoxy3G00691 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 1.1e-96 357.5 257 67.7
QL10p008953 Quercus lobata HOM05D005847 ORTHO05D007143 1.1e-96 357.5 256 68.4
MD06G1113800 Malus domestica HOM05D005847 ORTHO05D007143 1.4e-96 357.1 253 69.6
Aqoxy5G04298 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 1.6e-95 353.6 256 66.8
PSO017G1852 Papaver somniferum HOM05D005847 ORTHO05D007143 1.6e-95 353.6 256 69.1
Peaxi162Scf00074g00363 Petunia axillaris HOM05D005847 ORTHO05D007143 1.6e-95 353.6 254 70.9
MELO3C005771.2 Cucumis melo HOM05D005847 ORTHO05D007143 2.7e-95 352.8 255 66.7
Sabra01G0063100 Salix brachista HOM05D005847 ORTHO05D007143 4.6e-95 352.1 262 65.3
TPR.G8535 Trifolium pratense HOM05D005847 ORTHO05D007143 7.8e-95 351.3 235 73.2
Sed0023920 Sechium edule HOM05D005847 ORTHO05D007143 3.9e-94 349.0 255 67.1
DCAR_006499 Daucus carota HOM05D005847 ORTHO05D007143 6.6e-94 348.2 255 66.7
HanXRQChr13g0415001 Helianthus annuus HOM05D005847 ORTHO05D007143 6.6e-94 348.2 259 66.0
Sc01g0010500 Simmondsia chinensis HOM05D005847 ORTHO05D007143 1.3e-92 344.0 255 65.1
Hund18289 Selenicereus undatus HOM05D005847 ORTHO05D007143 2.8e-92 342.8 255 65.9
Rhsim02G0249100 Rhododendron simsii HOM05D005847 ORTHO05D007143 5.3e-91 338.6 264 65.9
Oeu058016.1 Olea europaea HOM05D005847 ORTHO05D007143 6.9e-91 338.2 254 66.9
ATR0757G021 Amborella trichopoda HOM05D005847 ORTHO05D007143 2.0e-90 336.7 255 66.7
MSTRG.26906 Avicennia marina HOM05D005847 ORTHO05D007143 2.0e-90 336.7 255 65.1
EL10Ac5g12470 Beta vulgaris HOM05D005847 ORTHO05D007143 2.0e-90 336.7 255 64.7
arahy.Tifrunner.gnm1.ann1.HI9AVU Arachis hypogaea HOM05D005847 ORTHO05D007143 1.9e-88 330.1 210 77.1
arahy.Tifrunner.gnm1.ann1.PR6ST2 Arachis hypogaea HOM05D005847 ORTHO05D007143 1.9e-88 330.1 248 67.3
AUR62007027 Chenopodium quinoa HOM05D005847 ORTHO05D007143 7.1e-88 328.2 255 63.1
Migut.E00656 Erythranthe guttata HOM05D005847 ORTHO05D007143 7.1e-88 328.2 255 63.1
THA.LOC104809314 Tarenaya hassleriana HOM05D005847 ORTHO05D007143 1.2e-87 327.4 245 66.5
ClCG01G001660 Citrullus lanatus HOM05D005847 ORTHO05D007143 1.6e-87 327.0 311 55.6
PGSC0003DMG400012250 Solanum tuberosum HOM05D005847 ORTHO05D007143 2.1e-87 326.6 255 67.1
Os07g0297300 Oryza sativa ssp. japonica HOM05D005847 ORTHO05D007143 2.3e-86 323.2 258 61.6
AUR62019890 Chenopodium quinoa HOM05D005847 ORTHO05D007143 3.0e-86 322.8 262 61.5
HPP92_003273 Vanilla planifolia HOM05D005847 ORTHO05D007143 8.7e-86 321.2 255 62.4
SGA_v2.0_scaffold159G37696 Striga asiatica HOM05D005847 ORTHO05D007143 1.9e-85 320.1 250 62.4
Zm00001eb021260 Zea mays HOM05D005847 ORTHO05D007143 1.9e-85 320.1 258 61.6
COL.COLO4_10763 Corchorus olitorius HOM05D005847 ORTHO05D007143 3.3e-85 319.3 255 63.5
Aa31LG2G1600 Aethionema arabicum HOM05D005847 ORTHO05D007143 2.8e-84 316.2 298 55.7
AL2G10160 Arabidopsis lyrata HOM05D005847 ORTHO05D007143 3.6e-84 315.8 246 63.4
Carub.0002s0014 Capsella rubella HOM05D005847 ORTHO05D007143 6.2e-84 315.1 315 52.7
AT1G64600 Arabidopsis thaliana HOM05D005847 ORTHO05D007143 3.1e-83 312.8 246 62.2
Thhalv10023366m.g Eutrema salsugineum HOM05D005847 ORTHO05D007143 2.2e-81 306.6 254 61.0
Sp2g00130 Schrenkiella parvula HOM05D005847 ORTHO05D007143 4.9e-81 305.4 253 60.1
BcaC04g22588 Brassica carinata HOM05D005847 ORTHO05D007143 9.3e-80 301.2 251 60.2
A09p14540 Brassica napus HOM05D005847 ORTHO05D007143 9.3e-80 301.2 251 60.2
C09p17640 Brassica napus HOM05D005847 ORTHO05D007143 9.3e-80 301.2 251 60.2
BolC9t54656H Brassica oleracea HOM05D005847 ORTHO05D007143 9.3e-80 301.2 251 60.2
BcaB07g31478 Brassica carinata HOM05D005847 ORTHO05D007143 2.1e-79 300.1 251 59.8
BraA09t37102Z Brassica rapa HOM05D005847 ORTHO05D007143 2.1e-79 300.1 251 60.2
vmacro11522 Vaccinium macrocarpon HOM05D005847 ORTHO05D007143 2.8e-76 289.7 294 54.1
unitig_21.g20386 Utricularia gibba HOM05D005847 ORTHO05D007143 1.0e-70 271.2 245 58.0
Nn1g00324 Nelumbo nucifera HOM05D005847 ORTHO05D007143 1.1e-69 267.7 222 63.5
Cpa.g.sc15.20 Carica papaya HOM05D005847 ORTHO05D007143 4.8e-68 262.3 210 60.5
Nitab4.5_0002027g0040 Nicotiana tabacum HOM05D005847 ORTHO05D007143 5.3e-67 258.8 190 68.9
Aqoxy5G04303 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 4.5e-58 229.2 220 57.3
Mapoly0031s0174 Marchantia polymorpha HOM05D005847 ORTHO05D007143 3.8e-49 199.5 254 41.7
Pp3c9_6890 Physcomitrium patens HOM05D005847 ORTHO05D007143 8.8e-46 188.3 264 41.7
Nitab4.5_0006880g0020 Nicotiana tabacum HOM05D005847 ORTHO05D007143 6.3e-44 182.2 271 45.0
SHI06935 Sapria himalayana HOM05D005847 ORTHO05D007143 8.0e-39 165.2 200 49.5
Ah.12g052990 Amaranthus hybridus HOM05D005847 ORTHO05D007143 4.0e-38 162.9 255 38.8
SMO119G0297 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 4.0e-38 162.9 244 37.3
SMO115G0010 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 7.5e-37 158.7 150 48.0
SMO116G0437 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 2.0e-34 150.6 239 34.7
CBR_g978 Chara braunii HOM05D005847 ORTHO05D007143 9.1e-27 125.2 174 39.1
RcHm_v2.0_Chr7g0205571 Rosa chinensis HOM05D005847 ORTHO05D007143 5.9e-26 122.5 177 43.5
RcHm_v2.0_Chr7g0205551 Rosa chinensis HOM05D005847 ORTHO05D007143 3.8e-25 119.8 175 44.0
Os10g0520950 Oryza sativa ssp. japonica HOM05D005847 ORTHO05D007143 1.8e-22 110.9 121 49.6
AagrBONN_evm.TU.Sc2ySwM_228.3279 Anthoceros agrestis HOM05D005847 ORTHO05D007143 6.3e-20 102.4 96 51.0
Lj3g0011757 Lotus japonicus HOM05D005847 ORTHO05D007143 3.3e-16 90.1 179 35.8
QL02p028460 Quercus lobata HOM05D005847 ORTHO05D007143 5.6e-16 89.4 74 58.1


User provided reference genes

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