Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1272 Ceratophyllum demersum HOM05D006481 ORTHO05D008160 1.8e-270 935.6 571 100.0
Aqoxy6G02732 Aquilegia oxysepala HOM05D006481 ORTHO05D008160 6.8e-57 226.1 586 37.4
TAR376G0872 Trochodendron aralioides HOM05D006481 ORTHO05D008160 9.9e-56 222.2 340 47.1
CSS0020952 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 2.9e-55 220.7 321 47.4
CSS0029586 Camellia sinensis var. sinensis HOM05D006481 ORTHO05D008160 2.9e-55 220.7 321 47.4
Sabra16G0185800 Salix brachista HOM05D006481 ORTHO05D008160 3.2e-54 217.2 321 44.5
Manes.10G058310 Manihot esculenta HOM05D006481 ORTHO05D008160 5.4e-54 216.5 337 44.5
Dinv42219 Davidia involucrata HOM05D006481 ORTHO05D008160 7.1e-54 216.1 337 44.5
Potri.009G090900 Populus trichocarpa HOM05D006481 ORTHO05D008160 7.1e-54 216.1 325 44.3
PSO541G1903 Papaver somniferum HOM05D006481 ORTHO05D008160 9.3e-54 215.7 625 37.8
PSO675G3182 Papaver somniferum HOM05D006481 ORTHO05D008160 1.2e-53 215.3 632 37.3
Dinv15788 Davidia involucrata HOM05D006481 ORTHO05D008160 4.6e-53 213.4 361 44.3
Oeu021369.1 Olea europaea HOM05D006481 ORTHO05D008160 6.0e-53 213.0 330 44.5
vmacro01976 Vaccinium macrocarpon HOM05D006481 ORTHO05D008160 6.0e-53 213.0 345 45.2
Prupe.8G140600 Prunus persica HOM05D006481 ORTHO05D008160 1.3e-52 211.8 343 44.3
MELO3C017986.2 Cucumis melo HOM05D006481 ORTHO05D008160 2.3e-52 211.1 327 45.9
CsaV3_4G000490 Cucumis sativus L. HOM05D006481 ORTHO05D008160 6.6e-52 209.5 328 46.0
Solyc01g107260.4 Solanum lycopersicum HOM05D006481 ORTHO05D008160 1.5e-51 208.4 320 44.7
Sopen01g049510 Solanum pennellii HOM05D006481 ORTHO05D008160 1.5e-51 208.4 304 46.4
TAR628G0609 Trochodendron aralioides HOM05D006481 ORTHO05D008160 2.5e-51 207.6 359 43.2
Actinidia34372 Actinidia chinensis HOM05D006481 ORTHO05D008160 4.3e-51 206.8 350 44.3
Potri.001G296700 Populus trichocarpa HOM05D006481 ORTHO05D008160 7.3e-51 206.1 320 43.4
Nitab4.5_0001105g0200 Nicotiana tabacum HOM05D006481 ORTHO05D008160 1.6e-50 204.9 347 41.8
Nitab4.5_0004685g0050 Nicotiana tabacum HOM05D006481 ORTHO05D008160 3.6e-50 203.8 341 42.8
CAN.G606.42 Capsicum annuum HOM05D006481 ORTHO05D008160 4.8e-50 203.4 329 43.5
AUR62027350 Chenopodium quinoa HOM05D006481 ORTHO05D008160 4.8e-50 203.4 309 45.0
A08p03520 Brassica napus HOM05D006481 ORTHO05D008160 6.2e-50 203.0 334 44.3
Cc02_g30880 Coffea canephora HOM05D006481 ORTHO05D008160 6.2e-50 203.0 323 43.3
Rhsim11G0154700 Rhododendron simsii HOM05D006481 ORTHO05D008160 6.2e-50 203.0 340 44.4
RhsimUnG0125900 Rhododendron simsii HOM05D006481 ORTHO05D008160 6.2e-50 203.0 340 44.7
GSVIVG01037865001 Vitis vinifera HOM05D006481 ORTHO05D008160 6.2e-50 203.0 345 44.1
Sed0008985 Sechium edule HOM05D006481 ORTHO05D008160 8.1e-50 202.6 350 42.6
Lj5A217G88 Lonicera japonica HOM05D006481 ORTHO05D008160 1.1e-49 202.2 315 46.0
Cfa004657 Carpinus fangiana HOM05D006481 ORTHO05D008160 1.4e-49 201.8 354 42.4
MD05G1096200 Malus domestica HOM05D006481 ORTHO05D008160 1.8e-49 201.4 347 42.9
AUR62031332 Chenopodium quinoa HOM05D006481 ORTHO05D008160 3.1e-49 200.7 322 44.4
QL11p031947 Quercus lobata HOM05D006481 ORTHO05D008160 4.0e-49 200.3 343 42.9
BcaB04g17289 Brassica carinata HOM05D006481 ORTHO05D008160 6.9e-49 199.5 330 43.6
Thhalv10011233m.g Eutrema salsugineum HOM05D006481 ORTHO05D008160 9.0e-49 199.1 348 43.4
Ca_11047_v3 Cicer arietinum L. HOM05D006481 ORTHO05D008160 1.2e-48 198.7 353 42.5
Ciclev10027845m.g Citrus clementina HOM05D006481 ORTHO05D008160 2.6e-48 197.6 355 42.5
BolC8t47171H Brassica oleracea HOM05D006481 ORTHO05D008160 3.4e-48 197.2 332 43.4
HPP92_017760 Vanilla planifolia HOM05D006481 ORTHO05D008160 3.4e-48 197.2 302 45.0
Haze_10252 Corylus avellana HOM05D006481 ORTHO05D008160 4.5e-48 196.8 354 41.8
C08p03680 Brassica napus HOM05D006481 ORTHO05D008160 5.8e-48 196.4 336 43.8
CiPaw.05G015400 Carya illinoinensis HOM05D006481 ORTHO05D008160 5.8e-48 196.4 343 42.9
EL10Ac8g19363 Beta vulgaris HOM05D006481 ORTHO05D008160 7.6e-48 196.1 321 43.3
Atru.BG.62.p Acer truncatum HOM05D006481 ORTHO05D008160 9.9e-48 195.7 327 43.4
Ah.14g085520 Amaranthus hybridus HOM05D006481 ORTHO05D008160 9.9e-48 195.7 303 46.9
Duzib132G1015 Durio zibethinus HOM05D006481 ORTHO05D008160 9.9e-48 195.7 346 42.2
Sabra09G0070200 Salix brachista HOM05D006481 ORTHO05D008160 9.9e-48 195.7 326 41.7
Gorai.008G021000 Gossypium raimondii HOM05D006481 ORTHO05D008160 1.3e-47 195.3 335 42.7
Sp1g36750 Schrenkiella parvula HOM05D006481 ORTHO05D008160 1.3e-47 195.3 342 43.0
TWI14G1262 Tripterygium wilfordii HOM05D006481 ORTHO05D008160 1.7e-47 194.9 350 42.0
AL1G57410 Arabidopsis lyrata HOM05D006481 ORTHO05D008160 2.2e-47 194.5 349 42.7
Glyma.20G132200 Glycine max HOM05D006481 ORTHO05D008160 2.2e-47 194.5 352 41.5
Thecc.02G113600 Theobroma cacao HOM05D006481 ORTHO05D008160 2.2e-47 194.5 334 42.5
Gohir.D12G020600 Gossypium hirsutum HOM05D006481 ORTHO05D008160 2.9e-47 194.1 335 42.7
Aa31LG10G4220 Aethionema arabicum HOM05D006481 ORTHO05D008160 3.8e-47 193.7 332 44.0
Lj5g0022753 Lotus japonicus HOM05D006481 ORTHO05D008160 3.8e-47 193.7 347 41.5
DCAR_021965 Daucus carota HOM05D006481 ORTHO05D008160 4.9e-47 193.4 349 42.1
CARHR039920 Cardamine hirsuta HOM05D006481 ORTHO05D008160 6.4e-47 193.0 344 42.7
FAN15G2146 Fragaria x ananassa HOM05D006481 ORTHO05D008160 8.4e-47 192.6 342 41.5
Migut.B00421 Erythranthe guttata HOM05D006481 ORTHO05D008160 1.1e-46 192.2 316 44.9
ECA234G0568 Erigeron canadensis HOM05D006481 ORTHO05D008160 1.4e-46 191.8 326 41.4
FAN27G2785 Fragaria x ananassa HOM05D006481 ORTHO05D008160 1.4e-46 191.8 342 42.1
Gohir.A12G020400 Gossypium hirsutum HOM05D006481 ORTHO05D008160 1.4e-46 191.8 335 42.4
Lalb_Chr02g0145111 Lupinus albus HOM05D006481 ORTHO05D008160 1.4e-46 191.8 346 41.3
AT1G49870 Arabidopsis thaliana HOM05D006481 ORTHO05D008160 1.9e-46 191.4 346 41.9
Cpa.g.sc106.79 Carica papaya HOM05D006481 ORTHO05D008160 1.9e-46 191.4 349 40.4
RcHm_v2.0_Chr6g0252931 Rosa chinensis HOM05D006481 ORTHO05D008160 1.9e-46 191.4 325 43.1
MSTRG.16692 Avicennia marina HOM05D006481 ORTHO05D008160 2.4e-46 191.0 350 40.0
HanXRQChr16g0514441 Helianthus annuus HOM05D006481 ORTHO05D008160 7.1e-46 189.5 305 43.6
BraA08t32385Z Brassica rapa HOM05D006481 ORTHO05D008160 9.3e-46 189.1 333 43.5
Medtr1g106795 Medicago truncatula HOM05D006481 ORTHO05D008160 2.1e-45 188.0 329 42.2
TPR.G27130 Trifolium pratense HOM05D006481 ORTHO05D008160 3.5e-45 187.2 332 41.6
THA.LOC104825834 Tarenaya hassleriana HOM05D006481 ORTHO05D008160 4.6e-45 186.8 374 41.7
COL.COLO4_32543 Corchorus olitorius HOM05D006481 ORTHO05D008160 7.9e-45 186.0 350 42.3
SalBow6G0734 Salvia bowleyana HOM05D006481 ORTHO05D008160 7.9e-45 186.0 337 41.5
arahy.Tifrunner.gnm1.ann1.RQ9967 Arachis hypogaea HOM05D006481 ORTHO05D008160 1.0e-44 185.7 341 41.3
Carub.0001s3908 Capsella rubella HOM05D006481 ORTHO05D008160 1.3e-44 185.3 349 40.7
FvH4_2g03900 Fragaria vesca HOM05D006481 ORTHO05D008160 1.3e-44 185.3 342 41.5
Lsat_1_v5_gn_5_114361 Lactuca sativa HOM05D006481 ORTHO05D008160 1.3e-44 185.3 313 41.2
ClCG10G010570 Citrullus lanatus HOM05D006481 ORTHO05D008160 1.7e-44 184.9 338 41.7
arahy.Tifrunner.gnm1.ann1.IH69Y8 Arachis hypogaea HOM05D006481 ORTHO05D008160 3.9e-44 183.7 333 42.0
SGA_v2.0_scaffold225G43011 Striga asiatica HOM05D006481 ORTHO05D008160 8.7e-44 182.6 323 44.0
VMungo0720G0067 Vigna mungo HOM05D006481 ORTHO05D008160 1.1e-43 182.2 352 40.1
Os03g0604600 Oryza sativa ssp. japonica HOM05D006481 ORTHO05D008160 1.3e-42 178.7 317 41.0
Psat6g216240 Pisum sativum HOM05D006481 ORTHO05D008160 6.2e-42 176.4 332 41.6
Phvul.007G043300 Phaseolus vulgaris HOM05D006481 ORTHO05D008160 9.9e-40 169.1 348 38.5
Zm00001eb050130 Zea mays HOM05D006481 ORTHO05D008160 2.2e-39 167.9 320 39.7
unitig_744.g24217 Utricularia gibba HOM05D006481 ORTHO05D008160 3.8e-39 167.2 345 39.4
ATR0030G005 Amborella trichopoda HOM05D006481 ORTHO05D008160 5.5e-38 163.3 358 37.4
Eucgr.I01079 Eucalyptus grandis HOM05D006481 ORTHO05D008160 3.7e-34 150.6 342 39.2
PGSC0003DMG400025848 Solanum tuberosum HOM05D006481 ORTHO05D008160 4.8e-34 150.2 295 38.3
Peaxi162Scf00016g02732 Petunia axillaris HOM05D006481 ORTHO05D008160 1.5e-32 145.2 315 38.4
SEGI_11188 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 1.0e-23 115.9 322 32.9
SEGI_37018 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 1.0e-23 115.9 322 32.9
Sc14g0002570 Simmondsia chinensis HOM05D006481 ORTHO05D008160 2.5e-22 111.3 190 40.5
EL10Ac6g13964 Beta vulgaris HOM05D006481 ORTHO05D008160 2.8e-18 97.8 183 38.8
SHI05066 Sapria himalayana HOM05D006481 ORTHO05D008160 2.8e-18 97.8 89 62.9
Pp3c18_18840 Physcomitrium patens HOM05D006481 ORTHO05D008160 6.5e-15 86.7 297 32.3
SMO196G0099 Selaginella moellendorffii HOM05D006481 ORTHO05D008160 1.9e-14 85.1 318 32.1
MD10G1102400 Malus domestica HOM05D006481 ORTHO05D008160 2.7e-13 81.3 95 51.6
FAN20G1292 Fragaria x ananassa HOM05D006481 ORTHO05D008160 1.1e-11 75.9 117 42.7
Hma1.2p1_1361F.1_g278150 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 2.0e-11 75.1 109 44.0
MD10G1102500 Malus domestica HOM05D006481 ORTHO05D008160 2.0e-11 75.1 111 45.9
SEGI_25924 Sequoiadendron giganteum HOM05D006481 ORTHO05D008160 3.3e-11 74.3 350 28.9
SHI05065 Sapria himalayana HOM05D006481 ORTHO05D008160 3.7e-10 70.9 113 41.6
CBR_g49330 Chara braunii HOM05D006481 ORTHO05D008160 2.0e-08 65.1 71 52.1
Hma1.2p1_0883F.1_g232290 Hydrangea macrophylla HOM05D006481 ORTHO05D008160 4.2e-06 57.4 47 61.7


User provided reference genes

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