Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 3.9e-78 294.7 142 100.0
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 1.7e-25 119.8 83 71.1
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 8.0e-23 110.9 86 61.6
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 1.0e-22 110.5 77 72.7
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 1.5e-21 106.7 81 65.4
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 2.0e-21 106.3 77 68.8
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 2.6e-21 105.9 86 62.8
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 2.6e-21 105.9 77 68.8
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 3.4e-21 105.5 81 66.7
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 4.4e-21 105.1 77 64.9
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 7.5e-21 104.4 78 66.7
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 7.5e-21 104.4 77 70.1
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 9.8e-21 104.0 76 69.7
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 9.8e-21 104.0 74 68.9
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 9.8e-21 104.0 78 65.4
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 1.3e-20 103.6 75 68.0
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 1.3e-20 103.6 86 62.8
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 1.3e-20 103.6 78 66.7
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 1.7e-20 103.2 84 61.9
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.7e-20 103.2 75 66.7
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.7e-20 102.1 75 65.3
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.7e-20 102.1 75 65.3
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 3.7e-20 102.1 83 61.4
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 4.8e-20 101.7 66 72.7
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 1.1e-19 100.5 75 66.7
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 1.1e-19 100.5 75 64.0
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.1e-19 100.5 75 64.0
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.1e-19 100.5 75 64.0
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 1.1e-19 100.5 75 64.0
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 1.8e-19 99.8 76 65.8
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 1.8e-19 99.8 76 63.2
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 2.4e-19 99.4 76 65.8
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 2.4e-19 99.4 76 64.5
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 2.4e-19 99.4 79 62.0
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 3.1e-19 99.0 75 62.7
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 3.1e-19 99.0 79 67.1
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 3.1e-19 99.0 76 63.2
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 4.1e-19 98.6 76 64.5
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 4.1e-19 98.6 75 64.0
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 7.0e-19 97.8 77 62.3
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 7.0e-19 97.8 76 65.8
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 9.1e-19 97.4 82 58.5
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 1.2e-18 97.1 76 63.2
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 1.2e-18 97.1 75 62.7
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 2.7e-18 95.9 76 61.8
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 4.5e-18 95.1 76 63.2
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 5.9e-18 94.7 62 72.6
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 5.9e-18 94.7 62 72.6
Zm00001eb320640 Zea mays HOM05D006757 ORTHO05D004651 5.9e-18 94.7 83 56.6
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 7.7e-18 94.4 73 65.8
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 7.7e-18 94.4 73 65.8
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 7.7e-18 94.4 75 64.0
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 1.0e-17 94.0 75 61.3
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 1.0e-17 94.0 77 62.3
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 1.3e-17 93.6 77 63.6
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 1.3e-17 93.6 77 58.4
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 2.3e-17 92.8 75 57.3
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 2.3e-17 92.8 71 59.2
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 2.9e-17 92.4 68 66.2
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 2.9e-17 92.4 76 60.5
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 2.9e-17 92.4 76 55.3
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 3.8e-17 92.0 74 59.5
BcaC03g15537 Brassica carinata HOM05D006757 ORTHO05D004651 5.0e-17 91.7 62 67.7
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 5.0e-17 91.7 84 54.8
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 5.0e-17 91.7 77 63.6
Mapoly0058s0047 Marchantia polymorpha HOM05D006757 ORTHO05D004651 5.0e-17 91.7 78 61.5
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 8.6e-17 90.9 76 59.2
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 8.6e-17 90.9 75 61.3
Os09g0555600 Oryza sativa ssp. japonica HOM05D006757 ORTHO05D004651 2.5e-16 89.4 76 52.6
THA.LOC104809054 Tarenaya hassleriana HOM05D006757 ORTHO05D004651 2.5e-16 89.4 78 56.4
HPP92_025367 Vanilla planifolia HOM05D006757 ORTHO05D004651 3.3e-16 89.0 56 71.4
Thhalv10018185m.g Eutrema salsugineum HOM05D006757 ORTHO05D004651 4.2e-16 88.6 75 60.0
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 4.2e-16 88.6 84 54.8
unitig_699.g19471 Utricularia gibba HOM05D006757 ORTHO05D004651 5.5e-16 88.2 67 64.2
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 7.2e-16 87.8 85 58.8
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 7.2e-16 87.8 59 72.9
Sp5g30140 Schrenkiella parvula HOM05D006757 ORTHO05D004651 1.2e-15 87.0 75 58.7
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 1.6e-15 86.7 93 51.6
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 1.6e-15 86.7 113 46.0
AT1G75010 Arabidopsis thaliana HOM05D006757 ORTHO05D004651 2.1e-15 86.3 53 75.5
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 2.1e-15 86.3 57 73.7
AL2G34890 Arabidopsis lyrata HOM05D006757 ORTHO05D004651 2.8e-15 85.9 53 75.5
BcaC08g46956 Brassica carinata HOM05D006757 ORTHO05D004651 2.8e-15 85.9 53 75.5
Carub.0002s2179 Capsella rubella HOM05D006757 ORTHO05D004651 2.8e-15 85.9 53 75.5
CARHR068320 Cardamine hirsuta HOM05D006757 ORTHO05D004651 2.8e-15 85.9 53 75.5
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 3.6e-15 85.5 59 67.8
BcaC08g46933 Brassica carinata HOM05D006757 ORTHO05D004651 6.1e-15 84.7 53 75.5
A07p40640 Brassica napus HOM05D006757 ORTHO05D004651 6.1e-15 84.7 53 75.5
BolC6t39938H Brassica oleracea HOM05D006757 ORTHO05D004651 6.1e-15 84.7 53 75.5
BraA07t31608Z Brassica rapa HOM05D006757 ORTHO05D004651 6.1e-15 84.7 53 75.5
C06p49010 Brassica napus HOM05D006757 ORTHO05D004651 8.0e-15 84.3 72 59.7
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 8.0e-15 84.3 57 68.4
Aa31LG4G5230 Aethionema arabicum HOM05D006757 ORTHO05D004651 2.3e-14 82.8 72 56.9
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 2.3e-14 82.8 59 69.5
BolC2t09256H Brassica oleracea HOM05D006757 ORTHO05D004651 2.3e-14 82.8 61 62.3
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 3.0e-14 82.4 66 68.2
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 5.2e-14 81.6 75 60.0
CSS0046499 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 8.9e-14 80.9 46 80.4
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 4.4e-13 78.6 115 43.5
BcaNung05827 Brassica carinata HOM05D006757 ORTHO05D004651 5.6e-08 61.6 62 53.2


User provided reference genes

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