Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1231 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 9.7e-50 199.9 105 100.0
CDE04G2484 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 3.2e-21 105.1 198 40.9
CDE02G2425 Ceratophyllum demersum HOM05D005586 ORTHO05D007044 1.9e-13 79.3 128 46.9
Hma1.2p1_3184F.1_g333760 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 1.9e-13 79.3 138 41.3
Nn4g25000 Nelumbo nucifera HOM05D005586 ORTHO05D007044 7.5e-10 67.4 195 31.3
PSO170G6484 Papaver somniferum HOM05D005586 ORTHO05D007044 7.5e-10 67.4 62 64.5
TAR383G0761 Trochodendron aralioides HOM05D005586 ORTHO05D007044 1.3e-09 66.6 198 29.8
PSO063G4043 Papaver somniferum HOM05D005586 ORTHO05D007044 2.2e-09 65.9 62 64.5
GSVIVG01029208001 Vitis vinifera HOM05D005586 ORTHO05D007044 2.8e-09 65.5 176 31.2
MELO3C017465.2 Cucumis melo HOM05D005586 ORTHO05D007044 3.7e-09 65.1 49 65.3
ClCG06G013320 Citrullus lanatus HOM05D005586 ORTHO05D007044 4.9e-09 64.7 49 63.3
Cfa013507 Carpinus fangiana HOM05D005586 ORTHO05D007044 8.3e-09 63.9 49 65.3
Haze_22099 Corylus avellana HOM05D005586 ORTHO05D007044 8.3e-09 63.9 49 65.3
CsaV3_1G031580 Cucumis sativus L. HOM05D005586 ORTHO05D007044 8.3e-09 63.9 49 63.3
COL.COLO4_33680 Corchorus olitorius HOM05D005586 ORTHO05D007044 1.1e-08 63.5 53 60.4
Sed0016049 Sechium edule HOM05D005586 ORTHO05D007044 1.8e-08 62.8 49 63.3
TAR626G0800 Trochodendron aralioides HOM05D005586 ORTHO05D007044 1.8e-08 62.8 49 61.2
Sed0005590 Sechium edule HOM05D005586 ORTHO05D007044 3.1e-08 62.0 49 63.3
Lalb_Chr12g0199381 Lupinus albus HOM05D005586 ORTHO05D007044 4.1e-08 61.6 52 59.6
MBI03_g13495_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 4.1e-08 61.6 49 63.3
Actinidia14649 Actinidia chinensis HOM05D005586 ORTHO05D007044 5.4e-08 61.2 165 30.9
Cpa.g.sc95.50 Carica papaya HOM05D005586 ORTHO05D007044 5.4e-08 61.2 49 61.2
Thhalv10015707m.g Eutrema salsugineum HOM05D005586 ORTHO05D007044 7.0e-08 60.8 49 61.2
QL02p097708 Quercus lobata HOM05D005586 ORTHO05D007044 7.0e-08 60.8 49 61.2
Thecc.09G173100 Theobroma cacao HOM05D005586 ORTHO05D007044 7.0e-08 60.8 51 60.8
TWI60G0698 Tripterygium wilfordii HOM05D005586 ORTHO05D007044 7.0e-08 60.8 49 61.2
CiPaw.07G192200 Carya illinoinensis HOM05D005586 ORTHO05D007044 9.2e-08 60.5 49 59.2
Ca_21173_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 9.2e-08 60.5 50 56.0
Ca_21222_v3 Cicer arietinum L. HOM05D005586 ORTHO05D007044 9.2e-08 60.5 50 56.0
Duzib168G0896 Durio zibethinus HOM05D005586 ORTHO05D007044 9.2e-08 60.5 53 58.5
Ah.14g083790 Amaranthus hybridus HOM05D005586 ORTHO05D007044 1.2e-07 60.1 46 58.7
EL10Ac8g18286 Beta vulgaris HOM05D005586 ORTHO05D007044 1.2e-07 60.1 49 57.1
Medtr4g128210 Medicago truncatula HOM05D005586 ORTHO05D007044 1.2e-07 60.1 50 56.0
CANSAT11G2700 Cannabis sativa HOM05D005586 ORTHO05D007044 1.6e-07 59.7 49 57.1
Sc08g0005320 Simmondsia chinensis HOM05D005586 ORTHO05D007044 1.6e-07 59.7 49 57.1
Aqoxy7G02326 Aquilegia oxysepala HOM05D005586 ORTHO05D007044 2.0e-07 59.3 196 29.1
SEGI_38070 Sequoiadendron giganteum HOM05D005586 ORTHO05D007044 2.0e-07 59.3 49 59.2
Aa31LG3G13340 Aethionema arabicum HOM05D005586 ORTHO05D007044 2.7e-07 58.9 49 59.2
BcaB01g04458 Brassica carinata HOM05D005586 ORTHO05D007044 2.7e-07 58.9 49 61.2
BcaC01g06487 Brassica carinata HOM05D005586 ORTHO05D007044 2.7e-07 58.9 49 61.2
BcaC01g06491 Brassica carinata HOM05D005586 ORTHO05D007044 2.7e-07 58.9 49 61.2
A03p12820 Brassica napus HOM05D005586 ORTHO05D007044 2.7e-07 58.9 49 61.2
C03p14980 Brassica napus HOM05D005586 ORTHO05D007044 2.7e-07 58.9 49 61.2
BolC3t13940H Brassica oleracea HOM05D005586 ORTHO05D007044 2.7e-07 58.9 49 61.2
BraA03t10590Z Brassica rapa HOM05D005586 ORTHO05D007044 2.7e-07 58.9 49 61.2
MBI18_g04576_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 2.7e-07 58.9 49 61.2
TPR.G5407 Trifolium pratense HOM05D005586 ORTHO05D007044 2.7e-07 58.9 51 52.9
Gohir.D08G094100 Gossypium hirsutum HOM05D005586 ORTHO05D007044 3.5e-07 58.5 53 54.7
Gorai.004G099900 Gossypium raimondii HOM05D005586 ORTHO05D007044 3.5e-07 58.5 53 54.7
Psat0s509g0200 Pisum sativum HOM05D005586 ORTHO05D007044 3.5e-07 58.5 50 54.0
Carub.0008s1797 Capsella rubella HOM05D005586 ORTHO05D007044 4.5e-07 58.2 49 59.2
DCAR_017968 Daucus carota HOM05D005586 ORTHO05D007044 4.5e-07 58.2 187 29.9
MBI16_g35931_MAGBIO Magnolia biondii HOM05D005586 ORTHO05D007044 4.5e-07 58.2 42 69.0
Manes.14G153700 Manihot esculenta HOM05D005586 ORTHO05D007044 4.5e-07 58.2 49 57.1
AT5G57460 Arabidopsis thaliana HOM05D005586 ORTHO05D007044 7.7e-07 57.4 49 59.2
CARHR271250 Cardamine hirsuta HOM05D005586 ORTHO05D007044 7.7e-07 57.4 49 57.1
Eucgr.C02307 Eucalyptus grandis HOM05D005586 ORTHO05D007044 7.7e-07 57.4 63 47.6
SHI41749 Sapria himalayana HOM05D005586 ORTHO05D007044 7.7e-07 57.4 53 52.8
Dinv41251 Davidia involucrata HOM05D005586 ORTHO05D007044 1.0e-06 57.0 195 28.7
Gohir.A08G084500 Gossypium hirsutum HOM05D005586 ORTHO05D007044 1.0e-06 57.0 53 52.8
Atru.chr7.639 Acer truncatum HOM05D005586 ORTHO05D007044 1.3e-06 56.6 42 61.9
AL8G33420 Arabidopsis lyrata HOM05D005586 ORTHO05D007044 1.3e-06 56.6 49 57.1
BcaB08g36100 Brassica carinata HOM05D005586 ORTHO05D007044 1.3e-06 56.6 49 55.1
BcaC04g19966 Brassica carinata HOM05D005586 ORTHO05D007044 1.3e-06 56.6 49 57.1
C09p49310 Brassica napus HOM05D005586 ORTHO05D007044 1.3e-06 56.6 49 57.1
BolC9t57782H Brassica oleracea HOM05D005586 ORTHO05D007044 1.3e-06 56.6 49 57.1
Dinv25464 Davidia involucrata HOM05D005586 ORTHO05D007044 1.7e-06 56.2 195 28.7
Glyma.20G083600 Glycine max HOM05D005586 ORTHO05D007044 1.7e-06 56.2 49 55.1
SalBow1G5715 Salvia bowleyana HOM05D005586 ORTHO05D007044 1.7e-06 56.2 150 32.0
Sp6g19170 Schrenkiella parvula HOM05D005586 ORTHO05D007044 1.7e-06 56.2 49 57.1
arahy.Tifrunner.gnm1.ann1.F5X18S Arachis hypogaea HOM05D005586 ORTHO05D007044 2.3e-06 55.8 49 57.1
Lj4g0013239 Lotus japonicus HOM05D005586 ORTHO05D007044 2.3e-06 55.8 49 53.1
Ciclev10007551m.g Citrus clementina HOM05D005586 ORTHO05D007044 2.9e-06 55.5 42 66.7
Hma1.2p1_1025F.1_g249260 Hydrangea macrophylla HOM05D005586 ORTHO05D007044 2.9e-06 55.5 49 57.1
Potri.006G168200 Populus trichocarpa HOM05D005586 ORTHO05D007044 2.9e-06 55.5 49 55.1
unitig_899.g14852 Utricularia gibba HOM05D005586 ORTHO05D007044 2.9e-06 55.5 46 58.7
BraA10t43568Z Brassica rapa HOM05D005586 ORTHO05D007044 5.0e-06 54.7 49 55.1
Lj9P685T24 Lonicera japonica HOM05D005586 ORTHO05D007044 5.0e-06 54.7 187 28.3
Prupe.2G007900 Prunus persica HOM05D005586 ORTHO05D007044 5.0e-06 54.7 49 53.1
Sabra06G0129800 Salix brachista HOM05D005586 ORTHO05D007044 5.0e-06 54.7 49 55.1
Glyma.17G063500 Glycine max HOM05D005586 ORTHO05D007044 6.6e-06 54.3 49 53.1
PGR102G3328 Punica granatum HOM05D005586 ORTHO05D007044 6.6e-06 54.3 49 55.1
A10p14890 Brassica napus HOM05D005586 ORTHO05D007044 8.6e-06 53.9 49 53.1
THA.LOC104811789 Tarenaya hassleriana HOM05D005586 ORTHO05D007044 8.6e-06 53.9 49 53.1


User provided reference genes

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