Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1206 Ceratophyllum demersum HOM05D006659 ORTHO05D008372 6.9e-103 377.5 213 100.0
ATR0824G177 Amborella trichopoda HOM05D006659 ORTHO05D008372 2.9e-45 186.0 138 62.3
Oeu053837.1 Olea europaea HOM05D006659 ORTHO05D008372 2.1e-43 179.9 143 62.9
Lalb_Chr03g0026131 Lupinus albus HOM05D006659 ORTHO05D008372 4.7e-43 178.7 136 61.8
Haze_01513 Corylus avellana HOM05D006659 ORTHO05D008372 1.0e-42 177.6 139 61.9
MELO3C011657.2 Cucumis melo HOM05D006659 ORTHO05D008372 3.0e-42 176.0 136 61.0
PGR083G0301 Punica granatum HOM05D006659 ORTHO05D008372 3.0e-42 176.0 136 60.3
ClCG08G004640 Citrullus lanatus HOM05D006659 ORTHO05D008372 5.2e-42 175.3 136 60.3
Duzib151G0383 Durio zibethinus HOM05D006659 ORTHO05D008372 6.8e-42 174.9 136 60.3
Gohir.A09G211000 Gossypium hirsutum HOM05D006659 ORTHO05D008372 6.8e-42 174.9 136 61.0
Gohir.D09G204400 Gossypium hirsutum HOM05D006659 ORTHO05D008372 6.8e-42 174.9 136 61.0
Gorai.006G228300 Gossypium raimondii HOM05D006659 ORTHO05D008372 6.8e-42 174.9 136 61.0
GSVIVG01010754001 Vitis vinifera HOM05D006659 ORTHO05D008372 8.8e-42 174.5 139 59.7
Lalb_Chr01g0003161 Lupinus albus HOM05D006659 ORTHO05D008372 1.5e-41 173.7 136 60.3
arahy.Tifrunner.gnm1.ann1.AVW0M7 Arachis hypogaea HOM05D006659 ORTHO05D008372 2.0e-41 173.3 140 61.4
Rhsim09G0027800 Rhododendron simsii HOM05D006659 ORTHO05D008372 2.0e-41 173.3 137 58.4
RhsimUnG0221100 Rhododendron simsii HOM05D006659 ORTHO05D008372 2.0e-41 173.3 137 58.4
THA.LOC104803695 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 2.0e-41 173.3 140 57.1
Sed0027988 Sechium edule HOM05D006659 ORTHO05D008372 2.6e-41 172.9 139 58.3
THA.LOC104802307 Tarenaya hassleriana HOM05D006659 ORTHO05D008372 3.4e-41 172.6 138 56.5
COL.COLO4_07662 Corchorus olitorius HOM05D006659 ORTHO05D008372 4.4e-41 172.2 139 57.6
Os11g0267000 Oryza sativa ssp. japonica HOM05D006659 ORTHO05D008372 4.4e-41 172.2 148 56.8
VMungo1127G1494 Vigna mungo HOM05D006659 ORTHO05D008372 4.4e-41 172.2 142 56.3
QL10p048762 Quercus lobata HOM05D006659 ORTHO05D008372 7.5e-41 171.4 142 61.3
Cfa015167 Carpinus fangiana HOM05D006659 ORTHO05D008372 9.8e-41 171.0 143 60.1
Sabra07G0104600 Salix brachista HOM05D006659 ORTHO05D008372 9.8e-41 171.0 143 59.4
MSTRG.24582 Avicennia marina HOM05D006659 ORTHO05D008372 1.3e-40 170.6 137 61.3
CsaV3_6G003920 Cucumis sativus L. HOM05D006659 ORTHO05D008372 1.3e-40 170.6 139 59.7
TPR.G34236 Trifolium pratense HOM05D006659 ORTHO05D008372 1.3e-40 170.6 136 59.6
Glyma.12G052500 Glycine max HOM05D006659 ORTHO05D008372 1.7e-40 170.2 137 59.1
PSO675G8713 Papaver somniferum HOM05D006659 ORTHO05D008372 1.7e-40 170.2 136 61.8
Lj3g0013401 Lotus japonicus HOM05D006659 ORTHO05D008372 2.2e-40 169.9 146 57.5
Thecc.04G179900 Theobroma cacao HOM05D006659 ORTHO05D008372 2.2e-40 169.9 139 59.7
Phvul.011G054500 Phaseolus vulgaris HOM05D006659 ORTHO05D008372 2.8e-40 169.5 141 56.7
TAR362G1327 Trochodendron aralioides HOM05D006659 ORTHO05D008372 2.8e-40 169.5 137 60.6
Ca_20785_v3 Cicer arietinum L. HOM05D006659 ORTHO05D008372 3.7e-40 169.1 141 60.3
Sed0004224 Sechium edule HOM05D006659 ORTHO05D008372 3.7e-40 169.1 139 59.7
TWI14G0225 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 6.3e-40 168.3 137 60.6
TWI39G0181 Tripterygium wilfordii HOM05D006659 ORTHO05D008372 6.3e-40 168.3 137 60.6
Zm00001eb406810 Zea mays HOM05D006659 ORTHO05D008372 8.3e-40 167.9 137 57.7
Atru.chr3.1492 Acer truncatum HOM05D006659 ORTHO05D008372 1.1e-39 167.5 136 59.6
arahy.Tifrunner.gnm1.ann1.Q6M2DC Arachis hypogaea HOM05D006659 ORTHO05D008372 1.1e-39 167.5 139 59.0
Gohir.D10G129500 Gossypium hirsutum HOM05D006659 ORTHO05D008372 1.1e-39 167.5 137 59.9
Gorai.011G142800 Gossypium raimondii HOM05D006659 ORTHO05D008372 1.1e-39 167.5 137 59.9
Potri.017G030100 Populus trichocarpa HOM05D006659 ORTHO05D008372 1.4e-39 167.2 143 58.7
CiPaw.01G100500 Carya illinoinensis HOM05D006659 ORTHO05D008372 1.8e-39 166.8 144 59.7
PSO017G5731 Papaver somniferum HOM05D006659 ORTHO05D008372 1.8e-39 166.8 136 60.3
Prupe.1G193000 Prunus persica HOM05D006659 ORTHO05D008372 1.8e-39 166.8 144 58.3
Lsat_1_v5_gn_1_120661 Lactuca sativa HOM05D006659 ORTHO05D008372 2.4e-39 166.4 140 58.6
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 2.4e-39 166.4 139 62.6
Dinv22730 Davidia involucrata HOM05D006659 ORTHO05D008372 3.1e-39 166.0 109 67.0
Manes.11G120400 Manihot esculenta HOM05D006659 ORTHO05D008372 3.1e-39 166.0 146 58.9
Gohir.A10G137100 Gossypium hirsutum HOM05D006659 ORTHO05D008372 4.1e-39 165.6 137 59.1
Psat7g214800 Pisum sativum HOM05D006659 ORTHO05D008372 5.4e-39 165.2 140 59.3
Medtr4g067150 Medicago truncatula HOM05D006659 ORTHO05D008372 7.0e-39 164.9 138 58.0
Dinv44193 Davidia involucrata HOM05D006659 ORTHO05D008372 9.1e-39 164.5 120 61.7
Ah.07g201990 Amaranthus hybridus HOM05D006659 ORTHO05D008372 1.2e-38 164.1 146 56.2
Aa31LG10G13750 Aethionema arabicum HOM05D006659 ORTHO05D008372 2.0e-38 163.3 136 55.1
CSS0040017 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 2.7e-38 162.9 144 56.9
CSS0046315 Camellia sinensis var. sinensis HOM05D006659 ORTHO05D008372 2.7e-38 162.9 144 56.9
Lj6C54T1 Lonicera japonica HOM05D006659 ORTHO05D008372 3.5e-38 162.5 139 57.6
Ciclev10021505m.g Citrus clementina HOM05D006659 ORTHO05D008372 4.5e-38 162.2 144 57.6
Duzib212G0569 Durio zibethinus HOM05D006659 ORTHO05D008372 4.5e-38 162.2 136 56.6
Sabra17G0019600 Salix brachista HOM05D006659 ORTHO05D008372 5.9e-38 161.8 137 59.9
HanXRQChr01g0004971 Helianthus annuus HOM05D006659 ORTHO05D008372 1.0e-37 161.0 136 55.9
RcHm_v2.0_Chr4g0406801 Rosa chinensis HOM05D006659 ORTHO05D008372 1.7e-37 160.2 148 54.7
BcaC07g40279 Brassica carinata HOM05D006659 ORTHO05D008372 2.2e-37 159.8 137 57.7
C08p34410 Brassica napus HOM05D006659 ORTHO05D008372 2.2e-37 159.8 137 57.7
BolC8t51042H Brassica oleracea HOM05D006659 ORTHO05D008372 2.2e-37 159.8 137 57.7
Cpa.g.sc9.272 Carica papaya HOM05D006659 ORTHO05D008372 2.2e-37 159.8 141 55.3
Thhalv10006183m.g Eutrema salsugineum HOM05D006659 ORTHO05D008372 2.2e-37 159.8 137 56.2
Potri.007G128200 Populus trichocarpa HOM05D006659 ORTHO05D008372 2.2e-37 159.8 142 57.0
BcaB02g07470 Brassica carinata HOM05D006659 ORTHO05D008372 2.9e-37 159.5 137 56.9
A09p51640 Brassica napus HOM05D006659 ORTHO05D008372 3.8e-37 159.1 137 57.7
Cc03_g13110 Coffea canephora HOM05D006659 ORTHO05D008372 3.8e-37 159.1 142 56.3
ECA248G3871 Erigeron canadensis HOM05D006659 ORTHO05D008372 3.8e-37 159.1 136 55.1
A07p24640 Brassica napus HOM05D006659 ORTHO05D008372 5.0e-37 158.7 137 56.9
BraA09t40604Z Brassica rapa HOM05D006659 ORTHO05D008372 8.5e-37 157.9 137 56.9
AL5G41300 Arabidopsis lyrata HOM05D006659 ORTHO05D008372 1.9e-36 156.8 137 54.0
Nitab4.5_0008969g0010 Nicotiana tabacum HOM05D006659 ORTHO05D008372 1.9e-36 156.8 103 66.0
Sp5g03740 Schrenkiella parvula HOM05D006659 ORTHO05D008372 1.9e-36 156.8 137 57.7
AT3G59400 Arabidopsis thaliana HOM05D006659 ORTHO05D008372 2.5e-36 156.4 137 54.0
BcaC08g44982 Brassica carinata HOM05D006659 ORTHO05D008372 2.5e-36 156.4 138 56.5
BolC6t37777H Brassica oleracea HOM05D006659 ORTHO05D008372 2.5e-36 156.4 138 56.5
MD04G1040300 Malus domestica HOM05D006659 ORTHO05D008372 3.2e-36 156.0 141 56.7
Actinidia35977 Actinidia chinensis HOM05D006659 ORTHO05D008372 4.2e-36 155.6 132 55.3
Aqoxy2G04093 Aquilegia oxysepala HOM05D006659 ORTHO05D008372 5.5e-36 155.2 96 70.8
BraA07t30109Z Brassica rapa HOM05D006659 ORTHO05D008372 5.5e-36 155.2 138 56.5
Carub.0005s2614 Capsella rubella HOM05D006659 ORTHO05D008372 5.5e-36 155.2 138 52.9
unitig_578.g16263 Utricularia gibba HOM05D006659 ORTHO05D008372 5.5e-36 155.2 116 62.9
CANSAT78G0008 Cannabis sativa HOM05D006659 ORTHO05D008372 7.2e-36 154.8 102 63.7
EL10Ac3g05931 Beta vulgaris HOM05D006659 ORTHO05D008372 1.2e-35 154.1 137 54.7
BcaC07g40458 Brassica carinata HOM05D006659 ORTHO05D008372 1.2e-35 154.1 139 56.1
C06p26120 Brassica napus HOM05D006659 ORTHO05D008372 1.2e-35 154.1 138 55.8
Sopen06g029650 Solanum pennellii HOM05D006659 ORTHO05D008372 2.7e-35 152.9 144 55.6
CAN.G65.172 Capsicum annuum HOM05D006659 ORTHO05D008372 3.6e-35 152.5 147 53.7
SalBow6G0037 Salvia bowleyana HOM05D006659 ORTHO05D008372 3.6e-35 152.5 137 54.7
PGSC0003DMG400027013 Solanum tuberosum HOM05D006659 ORTHO05D008372 3.6e-35 152.5 146 54.1
Migut.N03108 Erythranthe guttata HOM05D006659 ORTHO05D008372 4.7e-35 152.1 115 61.7
Solyc06g073290.1 Solanum lycopersicum HOM05D006659 ORTHO05D008372 1.0e-34 151.0 144 55.6
FvH4_4g10790 Fragaria vesca HOM05D006659 ORTHO05D008372 1.8e-34 150.2 97 67.0
FAN07G0020 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.8e-34 150.2 97 67.0
FAN12G1956 Fragaria x ananassa HOM05D006659 ORTHO05D008372 1.8e-34 150.2 97 67.0
SEGI_36451 Sequoiadendron giganteum HOM05D006659 ORTHO05D008372 2.3e-34 149.8 104 65.4
CARHR169790 Cardamine hirsuta HOM05D006659 ORTHO05D008372 3.0e-34 149.4 138 52.9
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 1.2e-33 147.5 169 48.5
SGA_v2.0_scaffold31G12575 Striga asiatica HOM05D006659 ORTHO05D008372 1.4e-31 140.6 105 61.9
Oeu053835.1 Olea europaea HOM05D006659 ORTHO05D008372 1.3e-29 134.0 113 61.1
Peaxi162Scf00413g00827 Petunia axillaris HOM05D006659 ORTHO05D008372 2.9e-29 132.9 120 53.3
AagrBONN_evm.TU.Sc2ySwM_228.5135 Anthoceros agrestis HOM05D006659 ORTHO05D008372 8.6e-29 131.3 103 55.3
Glyma.11G127800 Glycine max HOM05D006659 ORTHO05D008372 1.9e-28 130.2 95 60.0
SMO170G0079 Selaginella moellendorffii HOM05D006659 ORTHO05D008372 4.7e-27 125.6 116 53.4
Mapoly0173s0019 Marchantia polymorpha HOM05D006659 ORTHO05D008372 3.0e-26 122.9 116 49.1
Pp3c25_4400 Physcomitrium patens HOM05D006659 ORTHO05D008372 5.2e-26 122.1 102 53.9
Manes.04G042918 Manihot esculenta HOM05D006659 ORTHO05D008372 2.0e-25 120.2 145 47.6
Pp3c6_11210 Physcomitrium patens HOM05D006659 ORTHO05D008372 2.6e-25 119.8 102 52.9
CBR_g10809 Chara braunii HOM05D006659 ORTHO05D008372 5.0e-21 105.5 109 45.9
Cre05.g246800 Chlamydomonas reinhardtii HOM05D006659 ORTHO05D008372 2.1e-19 100.1 116 42.2
MCO04G521 Micromonas commoda HOM05D006659 ORTHO05D008372 2.1e-19 100.1 115 41.7
PRCOL_00006170 Prasinoderma coloniale HOM05D006659 ORTHO05D008372 4.7e-19 99.0 116 40.5
Eucgr.H00371 Eucalyptus grandis HOM05D006659 ORTHO05D008372 6.8e-18 95.1 111 46.8
VMungo1309G1939 Vigna mungo HOM05D006659 ORTHO05D008372 2.2e-16 90.1 142 36.6


User provided reference genes

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