Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1204 Ceratophyllum demersum HOM05D001177 ORTHO05D007091 4.9e-121 438.0 246 100.0
CDE07G0753 Ceratophyllum demersum HOM05D001177 ORTHO05D007091 2.9e-89 332.4 316 68.0
Thecc.04G027000 Theobroma cacao HOM05D001177 ORTHO05D007091 6.0e-34 148.7 342 35.7
GSVIVG01003965001 Vitis vinifera HOM05D001177 ORTHO05D001507 6.0e-34 148.7 319 37.6
Dinv00599 Davidia involucrata HOM05D001177 ORTHO05D007091 3.9e-33 146.0 324 37.3
QL02p073037 Quercus lobata HOM05D001177 ORTHO05D007091 6.6e-33 145.2 362 33.7
QL02p073106 Quercus lobata HOM05D001177 ORTHO05D007091 6.6e-33 145.2 362 33.7
arahy.Tifrunner.gnm1.ann1.Q0SVNI Arachis hypogaea HOM05D001177 ORTHO05D007091 2.5e-32 143.3 318 37.4
arahy.Tifrunner.gnm1.ann1.R689L2 Arachis hypogaea HOM05D001177 ORTHO05D007091 2.5e-32 143.3 317 37.9
vmacro05919 Vaccinium macrocarpon HOM05D001177 ORTHO05D007091 5.6e-32 142.1 326 35.3
COL.COLO4_29271 Corchorus olitorius HOM05D001177 ORTHO05D007091 1.2e-31 141.0 330 35.8
CiPaw.04G032700 Carya illinoinensis HOM05D001177 ORTHO05D007091 1.6e-31 140.6 361 33.0
Ciclev10017544m.g Citrus clementina HOM05D001177 ORTHO05D001507 3.6e-31 139.4 363 33.9
Actinidia36159 Actinidia chinensis HOM05D001177 ORTHO05D007091 6.2e-31 138.7 332 37.0
Eucgr.I01697 Eucalyptus grandis HOM05D001177 ORTHO05D001507 8.1e-31 138.3 311 35.4
MD17G1018600 Malus domestica HOM05D001177 ORTHO05D007091 1.4e-30 137.5 348 33.0
Cc08_g11710 Coffea canephora HOM05D001177 ORTHO05D007091 1.8e-30 137.1 327 35.2
Prupe.3G299100 Prunus persica HOM05D001177 ORTHO05D001507 2.4e-30 136.7 325 38.8
MD09G1017800 Malus domestica HOM05D001177 ORTHO05D007091 4.0e-30 136.0 351 33.3
Rhsim10G0011600 Rhododendron simsii HOM05D001177 ORTHO05D007091 4.0e-30 136.0 351 33.0
Sabra16G0217700 Salix brachista HOM05D001177 ORTHO05D007091 1.2e-29 134.4 361 33.2
Duzib147G1186 Durio zibethinus HOM05D001177 ORTHO05D007091 2.6e-29 133.3 347 33.7
Lju41A46T90 Lonicera japonica HOM05D001177 ORTHO05D007091 7.6e-29 131.7 334 35.3
CSS0005984 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D007091 1.7e-28 130.6 331 38.4
CSS0031107 Camellia sinensis var. sinensis HOM05D001177 ORTHO05D007091 1.7e-28 130.6 331 38.4
RcHm_v2.0_Chr2g0174111 Rosa chinensis HOM05D001177 ORTHO05D007091 3.8e-28 129.4 359 31.5
Nn3g16573 Nelumbo nucifera HOM05D001177 ORTHO05D007091 6.4e-28 128.6 340 38.2
Manes.01G014100 Manihot esculenta HOM05D001177 ORTHO05D007091 1.1e-27 127.9 358 32.1
Duzib187G1086 Durio zibethinus HOM05D001177 ORTHO05D007091 2.7e-26 123.2 352 31.0
FAN02G2178 Fragaria x ananassa HOM05D001177 ORTHO05D007091 4.6e-26 122.5 367 30.2
CANSAT64G1259 Cannabis sativa HOM05D001177 ORTHO05D007091 6.0e-26 122.1 318 35.2
Nitab4.5_0001031g0080 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.7e-25 120.6 370 30.3
Cpa.g.sc1097.2 Carica papaya HOM05D001177 ORTHO05D007091 2.3e-25 120.2 318 31.4
Lj1g0014156 Lotus japonicus HOM05D001177 ORTHO05D007091 2.3e-25 120.2 341 36.7
Nitab4.5_0001863g0200 Nicotiana tabacum HOM05D001177 ORTHO05D007091 2.3e-25 120.2 370 30.8
PGSC0003DMG400020230 Solanum tuberosum HOM05D001177 ORTHO05D007091 3.9e-25 119.4 371 29.9
Gorai.007G074400 Gossypium raimondii HOM05D001177 ORTHO05D007091 5.1e-25 119.0 316 33.2
Sed0019906 Sechium edule HOM05D001177 ORTHO05D007091 6.6e-25 118.6 350 30.6
TWI12G0650 Tripterygium wilfordii HOM05D001177 ORTHO05D007091 6.6e-25 118.6 347 32.3
Ah.02g130620 Amaranthus hybridus HOM05D001177 ORTHO05D007091 1.5e-24 117.5 315 33.3
Peaxi162Scf00420g00254 Petunia axillaris HOM05D001177 ORTHO05D007091 1.5e-24 117.5 389 30.6
Solyc02g093760.4 Solanum lycopersicum HOM05D001177 ORTHO05D007091 1.5e-24 117.5 362 30.9
DCAR_002963 Daucus carota HOM05D001177 ORTHO05D007091 1.9e-24 117.1 339 31.6
Lalb_Chr14g0363031 Lupinus albus HOM05D001177 ORTHO05D007091 2.5e-24 116.7 339 31.9
CsaV3_3G027350 Cucumis sativus L. HOM05D001177 ORTHO05D007091 3.3e-24 116.3 347 31.4
TPR.G9071 Trifolium pratense HOM05D001177 ORTHO05D007091 3.3e-24 116.3 358 30.4
SGA_v2.0_scaffold135G34937 Striga asiatica HOM05D001177 ORTHO05D007091 5.6e-24 115.5 333 32.1
FAN09G0779 Fragaria x ananassa HOM05D001177 ORTHO05D007091 1.3e-23 114.4 360 29.2
FAN09G4850 Fragaria x ananassa HOM05D001177 ORTHO05D007091 1.3e-23 114.4 360 29.2
Sed0005287 Sechium edule HOM05D001177 ORTHO05D007091 1.3e-23 114.4 351 29.9
Aqoxy5G03563 Aquilegia oxysepala HOM05D001177 ORTHO05D007091 1.6e-23 114.0 377 30.5
Potri.001G336832 Populus trichocarpa HOM05D001177 ORTHO05D007091 1.6e-23 114.0 369 29.5
Atru.chr6.2479 Acer truncatum HOM05D001177 ORTHO05D007091 2.1e-23 113.6 386 30.6
Lsat_1_v5_gn_4_183800 Lactuca sativa HOM05D001177 ORTHO05D007091 2.1e-23 113.6 350 36.0
TAR371G1081 Trochodendron aralioides HOM05D001177 ORTHO05D007091 2.8e-23 113.2 313 32.6
ClCG05G013200 Citrullus lanatus HOM05D001177 ORTHO05D007091 3.6e-23 112.8 361 30.5
ATR0824G077 Amborella trichopoda HOM05D001177 ORTHO05D007091 4.8e-23 112.5 299 36.8
Gohir.D11G069600 Gossypium hirsutum HOM05D001177 ORTHO05D007091 6.2e-23 112.1 321 32.7
Oeu048591.1 Olea europaea HOM05D001177 ORTHO05D007091 6.2e-23 112.1 311 33.4
HanXRQChr09g0255621 Helianthus annuus HOM05D001177 ORTHO05D007091 1.4e-22 110.9 349 32.4
PGR083G2095 Punica granatum HOM05D001177 ORTHO05D007091 2.4e-22 110.2 351 29.6
Gohir.A11G065300 Gossypium hirsutum HOM05D001177 ORTHO05D007091 5.3e-22 109.0 321 32.7
EL10Ac6g13445 Beta vulgaris HOM05D001177 ORTHO05D007091 9.0e-22 108.2 308 31.2
Migut.H00054 Erythranthe guttata HOM05D001177 ORTHO05D007091 2.0e-21 107.1 333 36.0
Sopen02g038400 Solanum pennellii HOM05D001177 ORTHO05D007091 3.4e-21 106.3 366 30.3
Medtr7g035445 Medicago truncatula HOM05D001177 ORTHO05D007091 5.8e-21 105.5 357 30.5
PGSC0003DMG400006969 Solanum tuberosum HOM05D001177 ORTHO05D007091 7.6e-21 105.1 360 33.3
MELO3C014848.2 Cucumis melo HOM05D001177 ORTHO05D007091 9.9e-21 104.8 353 29.7
ECA232G2553 Erigeron canadensis HOM05D001177 ORTHO05D007091 1.7e-20 104.0 350 30.9
Nitab4.5_0005414g0040 Nicotiana tabacum HOM05D001177 ORTHO05D007091 2.2e-20 103.6 327 30.6
Haze_14808 Corylus avellana HOM05D001177 ORTHO05D007091 3.8e-20 102.8 378 27.8
TAR446G0002 Trochodendron aralioides HOM05D001177 ORTHO05D007091 3.8e-20 102.8 325 31.1
Ca_06569_v3 Cicer arietinum L. HOM05D001177 ORTHO05D007091 8.4e-20 101.7 350 33.1
Nn4g22453 Nelumbo nucifera HOM05D001177 ORTHO05D007091 8.4e-20 101.7 364 29.7
Glyma.16G063400 Glycine max HOM05D001177 ORTHO05D007091 1.4e-19 100.9 312 34.0
Sopen02g017100 Solanum pennellii HOM05D001177 ORTHO05D007091 2.4e-19 100.1 238 33.2
Sc03g0007010 Simmondsia chinensis HOM05D001177 ORTHO05D007091 7.1e-19 98.6 319 32.6
Solyc02g067970.4 Solanum lycopersicum HOM05D001177 ORTHO05D007091 1.2e-18 97.8 209 34.9
Phvul.008G148200 Phaseolus vulgaris HOM05D001177 ORTHO05D007091 2.7e-18 96.7 369 29.3
Psat3g169040 Pisum sativum HOM05D001177 ORTHO05D007091 4.6e-18 95.9 349 30.1
Gorai.006G037700 Gossypium raimondii HOM05D001177 ORTHO05D007091 6.0e-18 95.5 341 29.0
PSO017G0460 Papaver somniferum HOM05D001177 ORTHO05D007091 1.0e-17 94.7 323 31.0
SHI03853 Sapria himalayana HOM05D001177 ORTHO05D007091 1.0e-17 94.7 356 28.7
Sc03g0006890 Simmondsia chinensis HOM05D001177 ORTHO05D007091 1.0e-17 94.7 320 32.2
THA.LOC104805349 Tarenaya hassleriana HOM05D001177 ORTHO05D007091 5.1e-17 92.4 327 30.6
Glyma.19G082000 Glycine max HOM05D001177 ORTHO05D007091 6.7e-17 92.0 343 29.4
Hund24909 Selenicereus undatus HOM05D001177 ORTHO05D007091 6.7e-17 92.0 151 45.0
Carub.0005s0563 Capsella rubella HOM05D001177 ORTHO05D001507 1.1e-16 91.3 327 27.5
Gohir.A09G032700 Gossypium hirsutum HOM05D001177 ORTHO05D007091 1.1e-16 91.3 341 33.7
Dinv33388 Davidia involucrata HOM05D001177 ORTHO05D007091 2.5e-16 90.1 86 57.0
PSO339G1540 Papaver somniferum HOM05D001177 ORTHO05D007091 4.3e-16 89.4 318 32.7
FAN05G3425 Fragaria x ananassa HOM05D001177 ORTHO05D007091 2.8e-15 86.7 366 32.0
FAN14G2882 Fragaria x ananassa HOM05D001177 ORTHO05D007091 6.2e-15 85.5 367 26.7
HPP92_004596 Vanilla planifolia HOM05D001177 ORTHO05D007091 6.9e-14 82.0 156 41.0
FvH4_6g52470 Fragaria vesca HOM05D001177 ORTHO05D007091 1.2e-13 81.3 361 26.9
MBI11_g40895_MAGBIO Magnolia biondii HOM05D001177 ORTHO05D007091 1.2e-13 81.3 185 36.8
Os12g0267900 Oryza sativa ssp. japonica HOM05D001177 ORTHO05D007091 1.2e-13 81.3 188 35.1
PSO063G4178 Papaver somniferum HOM05D001177 ORTHO05D007091 1.2e-13 81.3 181 35.9
Manes.01G049405 Manihot esculenta HOM05D001177 ORTHO05D007091 2.6e-13 80.1 81 54.3
AT3G27330 Arabidopsis thaliana HOM05D001177 ORTHO05D001507 3.4e-13 79.7 322 27.0
PSO384G2778 Papaver somniferum HOM05D001177 ORTHO05D007091 7.6e-13 78.6 219 31.5
AUR62005578 Chenopodium quinoa HOM05D001177 ORTHO05D007091 2.2e-12 77.0 277 28.9
Thhalv10003629m.g Eutrema salsugineum HOM05D001177 ORTHO05D001507 3.2e-11 73.2 327 25.7
Nitab4.5_0000040g0530 Nicotiana tabacum HOM05D001177 ORTHO05D007091 3.2e-11 73.2 309 29.4
Sp2g16520 Schrenkiella parvula HOM05D001177 ORTHO05D001507 5.5e-11 72.4 334 26.9
Gohir.D09G032700 Gossypium hirsutum HOM05D001177 ORTHO05D007091 7.1e-11 72.0 190 40.5
Zm00001eb111820 Zea mays HOM05D001177 ORTHO05D007091 3.5e-10 69.7 183 32.2
AL5G16650 Arabidopsis lyrata HOM05D001177 ORTHO05D001507 7.9e-10 68.6 327 24.2
CARHR148650 Cardamine hirsuta HOM05D001177 ORTHO05D001507 7.9e-10 68.6 207 28.5
Nn6g31539 Nelumbo nucifera HOM05D001177 ORTHO05D007091 1.3e-09 67.8 251 28.7
Manes.S095224 Manihot esculenta HOM05D001177 ORTHO05D007091 1.8e-09 67.4 66 50.0
AUR62024152 Chenopodium quinoa HOM05D001177 ORTHO05D007091 3.0e-09 66.6 284 28.5
Zm00001eb331370 Zea mays HOM05D001177 ORTHO05D007091 6.7e-09 65.5 183 34.4
SEGI_15562 Sequoiadendron giganteum HOM05D001177 ORTHO05D007091 1.1e-08 64.7 193 30.1
Lj2g0025677 Lotus japonicus HOM05D005483 ORTHO05D007091 9.6e-08 61.6 39 74.4
Cfa007285 Carpinus fangiana HOM05D001177 ORTHO05D007091 1.6e-07 60.8 47 63.8
Nitab4.5_0001544g0170 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.1e-06 58.2 115 38.3
HPP92_004597 Vanilla planifolia HOM05D001177 ORTHO05D007091 1.1e-06 58.2 75 46.7
Nitab4.5_0001544g0160 Nicotiana tabacum HOM05D001177 ORTHO05D007091 1.4e-06 57.8 57 61.4
ECA232G2835 Erigeron canadensis HOM05D003414 ORTHO05D003913 3.1e-06 56.6 56 57.1
unitig_21.g20485 Utricularia gibba HOM05D001177 ORTHO05D007091 3.1e-06 56.6 44 61.4
C07p39030 Brassica napus HOM05D001177 ORTHO05D007091 6.9e-06 55.5 197 27.9
Thecc.04G025000 Theobroma cacao HOM05D001177 ORTHO05D007091 6.9e-06 55.5 49 57.1


User provided reference genes

Program Settings