Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1185 Ceratophyllum demersum HOM05D004560 ORTHO05D005540 2.6e-130 468.8 240 100.0
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 2.2e-102 375.9 217 90.3
MBI02_g02993_MAGBIO Magnolia biondii HOM05D004560 ORTHO05D005540 6.5e-33 145.2 225 48.4
TAR376G0591 Trochodendron aralioides HOM05D004560 ORTHO05D005540 2.1e-31 140.2 251 42.6
MD15G1283100 Malus domestica HOM05D004560 ORTHO05D005540 1.3e-30 137.5 255 42.7
Prupe.7G134200 Prunus persica HOM05D004560 ORTHO05D005540 1.3e-30 137.5 229 45.0
Nn1g04868 Nelumbo nucifera HOM05D004560 ORTHO05D005540 1.8e-30 137.1 227 45.8
MD02G1171200 Malus domestica HOM05D004560 ORTHO05D005540 3.0e-30 136.3 256 42.2
RcHm_v2.0_Chr2g0145051 Rosa chinensis HOM05D004560 ORTHO05D005540 3.3e-29 132.9 256 43.0
Nn5g30326 Nelumbo nucifera HOM05D004560 ORTHO05D005540 4.3e-29 132.5 250 42.8
FvH4_5g28170 Fragaria vesca HOM05D004560 ORTHO05D005540 1.6e-28 130.6 249 42.2
FAN08G1993 Fragaria x ananassa HOM05D004560 ORTHO05D005540 6.3e-28 128.6 246 42.3
Dinv39858 Davidia involucrata HOM05D004560 ORTHO05D005540 8.2e-28 128.3 260 42.3
CiPaw.02G008700 Carya illinoinensis HOM05D004560 ORTHO05D005540 1.1e-27 127.9 222 42.8
RcHm_v2.0_Chr4g0416641 Rosa chinensis HOM05D004560 ORTHO05D005540 1.1e-27 127.9 258 42.6
FAN04G2449 Fragaria x ananassa HOM05D004560 ORTHO05D005540 1.8e-27 127.1 243 42.4
Duzib147G0064 Durio zibethinus HOM05D004560 ORTHO05D005540 3.1e-27 126.3 265 41.5
PSO135G0768 Papaver somniferum HOM05D004560 ORTHO05D005540 4.1e-27 125.9 231 43.7
Cfa004012 Carpinus fangiana HOM05D004560 ORTHO05D005540 1.2e-26 124.4 259 37.8
PSO384G0851 Papaver somniferum HOM05D004560 ORTHO05D005540 1.2e-26 124.4 232 40.9
FAN18G2522 Fragaria x ananassa HOM05D004560 ORTHO05D005540 4.5e-26 122.5 243 41.6
Haze_15408 Corylus avellana HOM05D004560 ORTHO05D005540 7.6e-26 121.7 258 38.0
QL06p041719 Quercus lobata HOM05D004560 ORTHO05D005540 1.0e-25 121.3 265 39.6
CAN.G836.79 Capsicum annuum HOM05D004560 ORTHO05D005540 1.3e-25 120.9 250 41.2
TWI09G1111 Tripterygium wilfordii HOM05D004560 ORTHO05D005540 1.3e-25 120.9 227 42.3
Lalb_Chr16g0378501 Lupinus albus HOM05D004560 ORTHO05D005540 1.7e-25 120.6 215 43.7
Aqoxy5G01239 Aquilegia oxysepala HOM05D004560 ORTHO05D005540 2.2e-25 120.2 259 38.2
Duzib187G0053 Durio zibethinus HOM05D004560 ORTHO05D005540 2.2e-25 120.2 262 38.9
CANSAT01G1534 Cannabis sativa HOM05D004560 ORTHO05D005540 2.9e-25 119.8 260 40.4
Sed0014897 Sechium edule HOM05D004560 ORTHO05D005540 2.9e-25 119.8 243 39.5
arahy.Tifrunner.gnm1.ann1.IC24VR Arachis hypogaea HOM05D004560 ORTHO05D005540 6.5e-25 118.6 249 40.2
arahy.Tifrunner.gnm1.ann1.TDMJ0N Arachis hypogaea HOM05D004560 ORTHO05D005540 8.5e-25 118.2 249 40.2
Thecc.01G055000 Theobroma cacao HOM05D004560 ORTHO05D005540 1.9e-24 117.1 266 39.1
COL.COLO4_11405 Corchorus olitorius HOM05D004560 ORTHO05D005540 2.5e-24 116.7 266 41.0
TWI53G0832 Tripterygium wilfordii HOM05D004560 ORTHO05D005540 4.2e-24 115.9 252 40.9
ATR0753G002 Amborella trichopoda HOM05D004560 ORTHO05D005540 5.5e-24 115.5 241 42.3
ClCG01G016790 Citrullus lanatus HOM05D004560 ORTHO05D005540 1.2e-23 114.4 245 37.6
CSS0026663 Camellia sinensis var. sinensis HOM05D004560 ORTHO05D005540 1.6e-23 114.0 274 39.8
Eucgr.I00932 Eucalyptus grandis HOM05D004560 ORTHO05D005540 2.7e-23 113.2 267 37.5
Sopen02g035390 Solanum pennellii HOM05D004560 ORTHO05D005540 2.7e-23 113.2 250 38.4
MELO3C007558.2 Cucumis melo HOM05D004560 ORTHO05D005540 3.6e-23 112.8 249 37.3
Manes.12G101400 Manihot esculenta HOM05D004560 ORTHO05D005540 4.6e-23 112.5 263 35.7
Sed0025145 Sechium edule HOM05D004560 ORTHO05D005540 4.6e-23 112.5 243 38.7
TAR381G0340 Trochodendron aralioides HOM05D004560 ORTHO05D005540 6.1e-23 112.1 229 40.6
Manes.12G101200 Manihot esculenta HOM05D004560 ORTHO05D005540 7.9e-23 111.7 225 40.4
CsaV3_6G043220 Cucumis sativus L. HOM05D004560 ORTHO05D005540 1.8e-22 110.5 248 37.5
Lalb_Chr09g0323121 Lupinus albus HOM05D004560 ORTHO05D005540 1.8e-22 110.5 221 41.2
PSO170G6095 Papaver somniferum HOM05D004560 ORTHO05D005540 1.8e-22 110.5 258 38.4
PSO017G5866 Papaver somniferum HOM05D004560 ORTHO05D005540 2.3e-22 110.2 258 38.4
Potri.005G137700 Populus trichocarpa HOM05D004560 ORTHO05D005540 3.0e-22 109.8 237 39.2
Sabra05G0109900 Salix brachista HOM05D004560 ORTHO05D005540 3.9e-22 109.4 240 38.8
TWI73G0239 Tripterygium wilfordii HOM05D004560 ORTHO05D005540 3.9e-22 109.4 251 37.5
Lsat_1_v5_gn_2_84180 Lactuca sativa HOM05D004560 ORTHO05D005540 5.1e-22 109.0 258 38.0
ECA238G3505 Erigeron canadensis HOM05D004560 ORTHO05D005540 8.7e-22 108.2 244 38.5
Sc03g0001520 Simmondsia chinensis HOM05D004560 ORTHO05D005540 8.7e-22 108.2 250 36.4
HanXRQChr14g0442851 Helianthus annuus HOM05D004560 ORTHO05D005540 1.1e-21 107.8 220 40.5
Lalb_Chr09g0323141 Lupinus albus HOM05D004560 ORTHO05D005540 1.1e-21 107.8 223 40.8
Gohir.A12G072000 Gossypium hirsutum HOM05D004560 ORTHO05D005540 1.5e-21 107.5 225 40.4
Actinidia03789 Actinidia chinensis HOM05D004560 ORTHO05D005540 1.9e-21 107.1 263 38.8
Hund13557 Selenicereus undatus HOM05D004560 ORTHO05D005540 1.9e-21 107.1 231 39.4
Actinidia16497 Actinidia chinensis HOM05D004560 ORTHO05D005540 2.5e-21 106.7 267 39.3
Gohir.D12G068900 Gossypium hirsutum HOM05D004560 ORTHO05D005540 4.3e-21 105.9 225 40.4
Gorai.008G075400 Gossypium raimondii HOM05D004560 ORTHO05D005540 5.7e-21 105.5 225 40.4
Ciclev10024681m.g Citrus clementina HOM05D004560 ORTHO05D005540 7.4e-21 105.1 221 38.0
HanXRQChr14g0448241 Helianthus annuus HOM05D004560 ORTHO05D005540 7.4e-21 105.1 245 38.4
Migut.N01430 Erythranthe guttata HOM05D004560 ORTHO05D005540 1.3e-20 104.4 220 36.4
THA.LOC104819234 Tarenaya hassleriana HOM05D004560 ORTHO05D005540 1.3e-20 104.4 218 40.4
DCAR_014074 Daucus carota HOM05D004560 ORTHO05D005540 1.7e-20 104.0 261 37.9
Lj7A70T81 Lonicera japonica HOM05D004560 ORTHO05D005540 1.7e-20 104.0 258 39.1
Peaxi162Scf00450g00514 Petunia axillaris HOM05D004560 ORTHO05D005540 1.7e-20 104.0 263 35.4
vmacro17949 Vaccinium macrocarpon HOM05D004560 ORTHO05D005540 1.7e-20 104.0 260 39.2
Rhsim08G0100900 Rhododendron simsii HOM05D004560 ORTHO05D005540 2.2e-20 103.6 262 40.1
Aa31LG4G18600 Aethionema arabicum HOM05D004560 ORTHO05D005540 2.8e-20 103.2 209 40.7
TAR628G1123 Trochodendron aralioides HOM05D004560 ORTHO05D005540 2.8e-20 103.2 211 40.3
Lj4g0000036 Lotus japonicus HOM05D004560 ORTHO05D005540 6.3e-20 102.1 193 42.0
Nitab4.5_0001034g0140 Nicotiana tabacum HOM05D004560 ORTHO05D005540 6.3e-20 102.1 257 36.6
Gohir.A12G070800 Gossypium hirsutum HOM05D004560 ORTHO05D005540 1.4e-19 100.9 228 39.9
Potri.007G043300 Populus trichocarpa HOM05D004560 ORTHO05D005540 1.8e-19 100.5 266 35.0
Duzib264G0542 Durio zibethinus HOM05D004560 ORTHO05D005540 4.1e-19 99.4 267 34.8
Nitab4.5_0002016g0010 Nicotiana tabacum HOM05D004560 ORTHO05D005540 4.1e-19 99.4 260 37.3
Sabra07G0038200 Salix brachista HOM05D004560 ORTHO05D005540 4.1e-19 99.4 271 34.7
Sp5g11810 Schrenkiella parvula HOM05D004560 ORTHO05D005540 6.9e-19 98.6 211 40.3
MSTRG.23750 Avicennia marina HOM05D004560 ORTHO05D005540 9.1e-19 98.2 218 36.2
Atru.chr10.1634 Acer truncatum HOM05D004560 ORTHO05D005540 1.2e-18 97.8 188 39.9
Gohir.D12G068700 Gossypium hirsutum HOM05D004560 ORTHO05D005540 1.5e-18 97.4 224 39.7
Gorai.008G075200 Gossypium raimondii HOM05D004560 ORTHO05D005540 1.5e-18 97.4 225 40.0
HPP92_004077 Vanilla planifolia HOM05D004560 ORTHO05D005540 2.0e-18 97.1 203 40.9
HPP92_004113 Vanilla planifolia HOM05D004560 ORTHO05D005540 3.4e-18 96.3 199 39.2
EL10Ac4g07947 Beta vulgaris HOM05D004560 ORTHO05D005540 4.5e-18 95.9 259 35.1
Oeu039071.1 Olea europaea HOM05D004560 ORTHO05D005540 7.7e-18 95.1 248 35.5
Psat4g089080 Pisum sativum HOM05D004560 ORTHO05D005540 1.0e-17 94.7 195 40.0
PGR031G0319 Punica granatum HOM05D004560 ORTHO05D005540 1.0e-17 94.7 244 36.1
Oeu003960.1 Olea europaea HOM05D004560 ORTHO05D005540 1.7e-17 94.0 251 35.9
SEGI_38337 Sequoiadendron giganteum HOM05D004560 ORTHO05D005540 8.5e-17 91.7 242 33.9
GSVIVG01022139001 Vitis vinifera HOM05D004560 ORTHO05D005540 8.5e-17 91.7 238 33.6
AL5G30500 Arabidopsis lyrata HOM05D004560 ORTHO05D005540 7.2e-16 88.6 228 36.4
SHI34246 Sapria himalayana HOM05D004560 ORTHO05D005540 9.4e-16 88.2 237 31.6
Ca_19501_v3 Cicer arietinum L. HOM05D004560 ORTHO05D005540 2.1e-15 87.0 177 38.4
Phvul.003G244225 Phaseolus vulgaris HOM05D004560 ORTHO05D005540 2.1e-15 87.0 199 38.2
Glyma.05G096000 Glycine max HOM05D004560 ORTHO05D005540 4.7e-15 85.9 190 37.9
Zm00001eb019260 Zea mays HOM05D004560 ORTHO05D005540 2.3e-14 83.6 203 38.4
VMungo0251G0843 Vigna mungo HOM05D004560 ORTHO05D005540 1.1e-13 81.3 110 50.9
AT3G50370 Arabidopsis thaliana HOM05D004560 ORTHO05D005540 9.7e-13 78.2 181 38.1
TPR.G10251 Trifolium pratense HOM05D004560 ORTHO05D005540 1.3e-12 77.8 177 37.9
Carub.0005s1668 Capsella rubella HOM05D004560 ORTHO05D005540 3.7e-12 76.3 195 36.9
AUR62003874 Chenopodium quinoa HOM05D004560 ORTHO05D005540 3.7e-12 76.3 193 36.8
Mapoly0121s0051 Marchantia polymorpha HOM05D004560 ORTHO05D005540 4.1e-11 72.8 214 30.8
Glyma.17G175000 Glycine max HOM05D004560 ORTHO05D005540 5.3e-11 72.4 178 36.5
SMO340G0113 Selaginella moellendorffii HOM05D004560 ORTHO05D005540 2.6e-10 70.1 232 31.5
BraA09t39806Z Brassica rapa HOM05D004560 ORTHO05D005540 5.0e-09 65.9 159 38.4
BcaC07g39495 Brassica carinata HOM05D004560 ORTHO05D005540 8.5e-09 65.1 159 34.6
C08p25410 Brassica napus HOM05D004560 ORTHO05D005540 8.5e-09 65.1 159 34.6
BolC8t50162H Brassica oleracea HOM05D004560 ORTHO05D005540 8.5e-09 65.1 159 34.6
Pp3c7_3230 Physcomitrium patens HOM05D004560 ORTHO05D005540 1.4e-08 64.3 238 30.3
A09p43370 Brassica napus HOM05D004560 ORTHO05D005540 1.9e-08 63.9 158 38.0
CSS0033893 Camellia sinensis var. sinensis HOM05D004560 ORTHO05D005540 3.2e-08 63.2 152 37.5
BcaB01g00621 Brassica carinata HOM05D004560 ORTHO05D005540 4.2e-08 62.8 165 36.4
RcHm_v2.0_Chr2g0105371 Rosa chinensis HOM05D004560 ORTHO05D005540 7.2e-08 62.0 145 37.9
Solyc02g090760.4 Solanum lycopersicum HOM05D004560 ORTHO05D005540 9.4e-08 61.6 139 34.5
Pp3c11_18520 Physcomitrium patens HOM05D004560 ORTHO05D005540 6.1e-07 58.9 244 32.0
Pp3c11_18522 Physcomitrium patens HOM05D004560 ORTHO05D005540 6.1e-07 58.9 244 32.0
Cc07_g19160 Coffea canephora HOM05D004560 ORTHO05D005540 3.9e-06 56.2 226 28.3


User provided reference genes

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