Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1177 Ceratophyllum demersum HOM05D007286 ORTHO05D008955 1.1e-284 982.6 511 100.0
MBI19_g06405_MAGBIO Magnolia biondii HOM05D007286 ORTHO05D008955 9.4e-66 255.4 579 39.6
TAR555G0002 Trochodendron aralioides HOM05D007286 ORTHO05D008955 1.2e-65 255.0 586 38.9
Nn7g37274 Nelumbo nucifera HOM05D007286 ORTHO05D008955 4.7e-65 253.1 581 38.4
Aqoxy1G00088 Aquilegia oxysepala HOM05D007286 ORTHO05D008955 3.7e-54 216.9 566 36.7
Ciclev10000662m.g Citrus clementina HOM05D007286 ORTHO05D008955 4.3e-50 203.4 572 34.8
Hma1.2p1_0233F.1_g097980 Hydrangea macrophylla HOM05D007286 ORTHO05D008955 1.2e-49 201.8 572 36.0
PSO339G4644 Papaver somniferum HOM05D007286 ORTHO05D008955 2.1e-49 201.1 540 37.4
Manes.10G063001 Manihot esculenta HOM05D000188 ORTHO05D000362 4.0e-48 196.8 541 35.9
Hund06829 Selenicereus undatus HOM05D007286 ORTHO05D008955 3.2e-45 187.2 522 36.0
CSS0007228 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 3.5e-44 183.7 559 34.7
CSS0046865 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D008955 3.5e-44 183.7 559 34.7
ATR0307G001 Amborella trichopoda HOM05D007286 ORTHO05D008955 1.1e-40 172.2 590 32.7
GSVIVG01027344001 Vitis vinifera HOM05D007286 ORTHO05D008955 2.3e-40 171.0 550 34.2
Atru.chr12.1143 Acer truncatum HOM05D007286 ORTHO05D008955 4.0e-40 170.2 488 34.2
CANSAT56G4194 Cannabis sativa HOM05D007286 ORTHO05D008955 1.2e-39 168.7 552 33.0
CANSAT56G1680 Cannabis sativa HOM05D007286 ORTHO05D008955 7.5e-39 166.0 552 33.0
COL.COLO4_28923 Corchorus olitorius HOM05D007286 ORTHO05D008955 7.5e-39 166.0 580 32.4
QL04p050581 Quercus lobata HOM05D007286 ORTHO05D008955 9.8e-39 165.6 597 31.8
EL10Ac4g08793 Beta vulgaris HOM05D007286 ORTHO05D008955 1.3e-38 165.2 513 33.3
MSTRG.20479 Avicennia marina HOM05D007286 ORTHO05D008955 3.7e-38 163.7 536 33.8
Migut.B01162 Erythranthe guttata HOM05D007286 ORTHO05D008955 3.7e-38 163.7 522 35.4
Rhsim07G0072400 Rhododendron simsii HOM05D007286 ORTHO05D008955 1.1e-37 162.2 564 34.0
Cfa010442 Carpinus fangiana HOM05D007286 ORTHO05D008955 1.9e-37 161.4 584 32.4
TWI38G1128 Tripterygium wilfordii HOM05D007286 ORTHO05D008955 3.2e-37 160.6 569 32.7
Eucgr.G02637 Eucalyptus grandis HOM05D007286 ORTHO05D008955 4.1e-37 160.2 550 32.4
HanXRQChr07g0192711 Helianthus annuus HOM05D007286 ORTHO05D008955 4.1e-37 160.2 524 33.8
Gohir.D05G286600 Gossypium hirsutum HOM05D007286 ORTHO05D008955 9.2e-37 159.1 561 32.3
Potri.010G247100 Populus trichocarpa HOM05D007286 ORTHO05D008955 9.2e-37 159.1 576 30.2
RcHm_v2.0_Chr1g0331161 Rosa chinensis HOM05D007286 ORTHO05D008955 9.2e-37 159.1 583 32.8
Gorai.009G301600 Gossypium raimondii HOM05D007286 ORTHO05D008955 2.7e-36 157.5 566 32.7
Gohir.A05G285500 Gossypium hirsutum HOM05D007286 ORTHO05D008955 3.5e-36 157.1 570 31.8
PGR142G0126 Punica granatum HOM05D007286 ORTHO05D008955 1.3e-35 155.2 553 33.1
MD02G1265200 Malus domestica HOM05D007286 ORTHO05D008955 2.3e-35 154.5 567 31.9
Prupe.2G060300 Prunus persica HOM05D007286 ORTHO05D008955 2.3e-35 154.5 561 33.0
Sabra10G0192500 Salix brachista HOM05D007286 ORTHO05D008955 2.3e-35 154.5 575 30.1
FAN06G0358 Fragaria x ananassa HOM05D007286 ORTHO05D008955 6.6e-35 152.9 586 31.2
FAN10G3167 Fragaria x ananassa HOM05D007286 ORTHO05D008955 6.6e-35 152.9 588 31.1
Potri.008G012000 Populus trichocarpa HOM05D007286 ORTHO05D008955 8.6e-35 152.5 579 30.7
Thecc.10G130100 Theobroma cacao HOM05D007286 ORTHO05D008955 1.9e-34 151.4 572 31.8
FvH4_7g04960 Fragaria vesca HOM05D007286 ORTHO05D008955 2.5e-34 151.0 586 31.1
Dinv20486 Davidia involucrata HOM05D007286 ORTHO05D008955 4.3e-34 150.2 357 37.5
FAN03G1022 Fragaria x ananassa HOM05D007286 ORTHO05D008955 4.3e-34 150.2 588 31.3
CiPaw.13G047300 Carya illinoinensis HOM05D007286 ORTHO05D008955 7.3e-34 149.4 562 32.9
Sabra08G0007300 Salix brachista HOM05D007286 ORTHO05D008955 7.3e-34 149.4 569 30.6
Sed0010854 Sechium edule HOM05D007286 ORTHO05D008955 7.3e-34 149.4 563 31.4
MELO3C012308.2 Cucumis melo HOM05D007286 ORTHO05D008955 9.5e-34 149.1 590 30.7
CsaV3_5G034980 Cucumis sativus L. HOM05D007286 ORTHO05D008955 3.6e-33 147.1 580 30.3
Lsat_1_v5_gn_5_41960 Lactuca sativa HOM05D007286 ORTHO05D008955 6.2e-33 146.4 550 33.1
Peaxi162Scf00647g00320 Petunia axillaris HOM05D007286 ORTHO05D008955 6.2e-33 146.4 538 31.8
Psat4g141960 Pisum sativum HOM05D007286 ORTHO05D008955 8.1e-33 146.0 533 32.6
ClCG05G022150 Citrullus lanatus HOM05D007286 ORTHO05D008955 1.1e-32 145.6 564 31.6
Oeu013048.2 Olea europaea HOM05D007286 ORTHO05D008955 1.8e-32 144.8 538 32.0
Solyc01g096890.4 Solanum lycopersicum HOM05D007286 ORTHO05D008955 3.1e-32 144.1 536 31.7
Cc07_g21350 Coffea canephora HOM05D007286 ORTHO05D008955 6.8e-32 142.9 248 39.5
Sopen01g040600 Solanum pennellii HOM05D007286 ORTHO05D008955 8.9e-32 142.5 545 31.6
Duzib128G1558 Durio zibethinus HOM05D000138 ORTHO05D008955 1.2e-31 142.1 538 31.6
Lalb_Chr19g0132561 Lupinus albus HOM05D007286 ORTHO05D008955 1.2e-31 142.1 581 30.3
PGSC0003DMG401027501 Solanum tuberosum HOM05D007286 ORTHO05D008955 1.5e-31 141.7 539 31.4
Lj3g0009162 Lotus japonicus HOM05D007286 ORTHO05D008955 2.0e-31 141.4 529 31.8
Os11g0129800 Oryza sativa ssp. japonica HOM05D007286 ORTHO05D008955 2.6e-31 141.0 257 38.1
SGA_v2.0_scaffold143G35713 Striga asiatica HOM05D007286 ORTHO05D008955 3.4e-31 140.6 526 31.7
Medtr8g044120 Medicago truncatula HOM05D007286 ORTHO05D008955 1.3e-30 138.7 534 31.5
arahy.Tifrunner.gnm1.ann1.5NH7JH Arachis hypogaea HOM05D007286 ORTHO05D008955 1.7e-30 138.3 551 32.7
AUR62034104 Chenopodium quinoa HOM05D007286 ORTHO05D008955 6.4e-30 136.3 578 31.8
AUR62041274 Chenopodium quinoa HOM05D007286 ORTHO05D008955 8.3e-30 136.0 582 30.8
Glyma.08G227900 Glycine max HOM05D007286 ORTHO05D008955 1.4e-29 135.2 563 30.2
CAN.G134.51 Capsicum annuum HOM05D007286 ORTHO05D008955 1.9e-29 134.8 575 29.2
TPR.G36317 Trifolium pratense HOM05D007286 ORTHO05D008955 7.1e-29 132.9 248 40.7
Ah.04g162700 Amaranthus hybridus HOM05D003625 ORTHO05D004382 3.5e-28 130.6 489 31.7
Zm00001eb093550 Zea mays HOM05D007286 ORTHO05D008955 6.0e-28 129.8 251 38.2
Actinidia12136 Actinidia chinensis HOM05D007286 ORTHO05D008955 1.9e-26 124.8 540 30.9
arahy.Tifrunner.gnm1.ann1.VD1ICN Arachis hypogaea HOM05D007286 ORTHO05D008955 1.9e-26 124.8 600 28.8
Phvul.011G187500 Phaseolus vulgaris HOM05D007286 ORTHO05D008955 2.5e-26 124.4 523 30.0
Sc09g0004920 Simmondsia chinensis HOM05D007286 ORTHO05D008955 2.5e-26 124.4 557 29.4
VMungo1127G2168 Vigna mungo HOM05D007286 ORTHO05D008955 1.1e-24 119.0 239 37.7
Haze_03401 Corylus avellana HOM05D007286 ORTHO05D008955 1.8e-24 118.2 507 30.0
ECA246G2791 Erigeron canadensis HOM05D000076 ORTHO05D002730 2.4e-24 117.9 503 31.4
SalBow8G2801 Salvia bowleyana HOM05D007286 ORTHO05D008955 8.9e-24 115.9 384 34.1
Nitab4.5_0001611g0060 Nicotiana tabacum HOM05D007286 ORTHO05D008955 3.4e-23 114.0 571 28.5
HPP92_018000 Vanilla planifolia HOM05D007286 ORTHO05D008955 4.9e-22 110.2 576 28.1
Nitab4.5_0005056g0090 Nicotiana tabacum HOM05D007286 ORTHO05D008955 1.2e-20 105.5 448 29.2
Cpa.g.sc54.34 Carica papaya HOM05D007286 ORTHO05D008955 6.0e-20 103.2 127 50.4
Ca_12172_v3 Cicer arietinum L. HOM05D007286 ORTHO05D008955 6.0e-20 103.2 120 53.3
SEGI_40207 Sequoiadendron giganteum HOM05D005518 ORTHO05D001269 1.6e-17 95.1 602 25.9
Hma1.2p1_2056F.1_g312790 Hydrangea macrophylla HOM05D007286 ORTHO05D008955 2.1e-17 94.7 171 40.9
Aqoxy386s001 Aquilegia oxysepala HOM05D007286 ORTHO05D008955 1.2e-15 89.0 240 38.8
PSO384G4662 Papaver somniferum HOM05D007286 ORTHO05D008955 9.9e-15 85.9 191 37.7
vmacro23447 Vaccinium macrocarpon HOM05D007286 ORTHO05D008955 2.9e-14 84.3 350 32.9
vmacro13789 Vaccinium macrocarpon HOM05D007286 ORTHO05D008955 8.4e-14 82.8 350 32.0
Aqoxy386s002 Aquilegia oxysepala HOM05D007286 ORTHO05D008955 1.2e-12 79.0 198 35.4
MBI14_g12740_MAGBIO Magnolia biondii HOM05D005518 ORTHO05D001269 6.6e-11 73.2 279 26.9
Glyma.15G221551 Glycine max HOM05D007286 ORTHO05D008955 5.6e-10 70.1 179 33.0
SEGI_11479 Sequoiadendron giganteum HOM05D005518 ORTHO05D001269 2.1e-09 68.2 112 39.3
unitig_22.g5338 Utricularia gibba HOM05D007286 ORTHO05D008955 2.1e-09 68.2 283 30.0
HPP92_026687 Vanilla planifolia HOM05D007286 ORTHO05D008955 1.4e-08 65.5 205 29.8
Dinv11102 Davidia involucrata HOM05D005518 ORTHO05D001269 2.4e-08 64.7 111 37.8
vmacro13790 Vaccinium macrocarpon HOM05D007286 ORTHO05D008955 3.1e-08 64.3 200 31.5
vmacro23446 Vaccinium macrocarpon HOM05D007286 ORTHO05D008955 3.1e-08 64.3 200 31.5
CSS0040133 Camellia sinensis var. sinensis HOM05D005518 ORTHO05D001269 6.9e-08 63.2 251 28.7
Atru.chr9.1022 Acer truncatum HOM05D005518 ORTHO05D001269 2.6e-07 61.2 97 40.2
TAR626G1948 Trochodendron aralioides HOM05D005518 ORTHO05D001269 2.6e-07 61.2 100 43.0
Cfa000528 Carpinus fangiana HOM05D007286 ORTHO05D008955 3.4e-07 60.8 299 31.4
HPP92_026688 Vanilla planifolia HOM05D007286 ORTHO05D008955 4.5e-07 60.5 365 27.9
Cpa.g.sc4.97 Carica papaya HOM05D005518 ORTHO05D001269 7.6e-07 59.7 245 26.9
GSVIVG01003640001 Vitis vinifera HOM05D005518 ORTHO05D001269 7.6e-07 59.7 587 24.7
Lj5C99T12 Lonicera japonica HOM05D005518 ORTHO05D001269 9.9e-07 59.3 245 28.2
PSO782G5170 Papaver somniferum HOM05D005518 ORTHO05D001269 1.7e-06 58.5 97 40.2
Cc04_g10180 Coffea canephora HOM05D005518 ORTHO05D001269 2.9e-06 57.8 289 25.6
Glyma.04G193600 Glycine max HOM05D005518 ORTHO05D001269 8.4e-06 56.2 434 27.9


User provided reference genes

Program Settings