Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 2.3e-154 548.9 280 100.0
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 2.6e-73 279.6 183 74.3
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 8.2e-72 274.6 176 73.3
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 1.4e-71 273.9 175 76.0
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 1.8e-71 273.5 176 74.4
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 3.1e-71 272.7 175 73.7
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 4.1e-71 272.3 175 72.0
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 5.3e-71 271.9 176 75.0
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 9.1e-71 271.2 177 71.2
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 3.5e-70 269.2 176 72.7
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 5.9e-70 268.5 176 73.3
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 5.9e-70 268.5 176 74.4
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 1.3e-69 267.3 176 71.0
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 1.7e-69 266.9 175 73.1
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 3.8e-69 265.8 175 70.9
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 8.5e-69 264.6 177 71.2
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 1.5e-68 263.8 177 71.2
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 3.2e-68 262.7 176 69.9
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 5.5e-68 261.9 173 70.5
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 1.2e-67 260.8 175 68.0
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 1.2e-67 260.8 200 65.0
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 1.6e-67 260.4 216 61.6
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 2.7e-67 259.6 176 68.8
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 2.7e-67 259.6 198 64.6
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 4.7e-67 258.8 175 71.4
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 6.1e-67 258.5 172 70.3
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 1.4e-66 257.3 177 67.2
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 3.0e-66 256.1 175 70.3
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 4.0e-66 255.8 176 68.2
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 5.2e-66 255.4 178 68.0
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 8.8e-66 254.6 202 60.9
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 1.5e-65 253.8 171 73.1
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 2.0e-65 253.4 176 71.6
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 2.0e-65 253.4 176 69.3
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 2.6e-65 253.1 171 71.9
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 4.4e-65 252.3 177 66.7
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 4.4e-65 252.3 176 72.2
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 5.7e-65 251.9 175 69.1
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 5.7e-65 251.9 167 74.3
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 9.8e-65 251.1 175 69.7
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 9.8e-65 251.1 176 66.5
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 1.7e-64 250.4 175 67.4
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 1.7e-64 250.4 175 69.7
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 1.7e-64 250.4 175 65.7
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 3.7e-64 249.2 175 69.1
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 3.7e-64 249.2 175 70.3
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 8.3e-64 248.1 174 66.7
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 1.4e-63 247.3 174 66.7
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 1.4e-63 247.3 177 65.5
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 3.1e-63 246.1 175 67.4
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 4.1e-63 245.7 175 65.1
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 4.1e-63 245.7 176 64.8
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 5.4e-63 245.4 171 66.7
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 7.0e-63 245.0 176 63.1
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 7.0e-63 245.0 175 66.9
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 1.2e-62 244.2 171 68.4
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 1.6e-62 243.8 176 64.8
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 2.0e-62 243.4 175 66.9
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 3.5e-62 242.7 175 63.4
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 5.9e-62 241.9 176 67.6
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 2.9e-61 239.6 175 66.3
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 3.8e-61 239.2 175 70.3
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 5.0e-61 238.8 175 65.7
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 8.5e-61 238.0 175 63.4
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 1.1e-60 237.7 164 69.5
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 1.1e-60 237.7 164 69.5
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 1.2e-59 234.2 175 68.0
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 2.7e-59 233.0 168 63.7
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 3.6e-59 232.6 216 56.0
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 2.3e-58 229.9 167 64.1
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 3.0e-58 229.6 168 63.1
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 4.1e-55 219.2 140 72.9
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 7.7e-54 214.9 139 71.2
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 3.8e-53 212.6 140 72.9
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 1.1e-52 211.1 156 65.4
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 3.3e-52 209.5 142 69.7
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 5.5e-52 208.8 142 69.7
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 3.6e-51 206.1 139 71.9
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 2.0e-49 200.3 184 55.4
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 1.2e-46 191.0 121 71.9
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 2.3e-45 186.8 119 71.4
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 5.0e-45 185.7 128 68.0
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 1.2e-41 174.5 131 64.9
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 7.5e-41 171.8 109 73.4
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 1.6e-38 164.1 191 45.5
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 2.0e-38 163.7 203 46.8
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 2.4e-31 140.2 133 53.4
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 7.1e-31 138.7 89 74.2
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 1.6e-30 137.5 107 65.4
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 3.0e-29 133.3 185 44.3
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 5.1e-29 132.5 78 78.2
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 3.6e-27 126.3 89 66.3
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 8.1e-27 125.2 70 82.9
Actinidia22899 Actinidia chinensis HOM05D006972 ORTHO05D008519 2.9e-24 116.7 73 78.1
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 1.1e-23 114.8 187 39.6
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 1.0e-21 108.2 130 39.2
Glyma.11G085800 Glycine max HOM05D006972 ORTHO05D008519 1.7e-21 107.5 146 43.8
CDE06G2271 Ceratophyllum demersum HOM05D001708 ORTHO05D001649 4.3e-20 102.8 89 64.0
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 1.4e-18 97.8 180 33.3
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 4.0e-18 96.3 75 64.0
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 2.0e-17 94.0 170 33.5
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 4.4e-17 92.8 193 30.6
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 4.2e-15 86.3 169 37.9
Lsat_1_v5_gn_8_30121 Lactuca sativa HOM05D006972 ORTHO05D008519 1.6e-14 84.3 60 68.3
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 1.7e-13 80.9 123 43.1
MD15G1231400 Malus domestica HOM05D006972 ORTHO05D008519 2.3e-13 80.5 59 59.3
MD02G1111700 Malus domestica HOM05D006972 ORTHO05D008519 1.5e-09 67.8 175 27.4
arahy.Tifrunner.gnm1.ann1.J6JT3S Arachis hypogaea HOM05D006972 ORTHO05D008519 2.4e-07 60.5 46 54.3
arahy.Tifrunner.gnm1.ann1.9GY3HT Arachis hypogaea HOM05D006972 ORTHO05D008519 3.2e-07 60.1 60 46.7


User provided reference genes

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