Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 1.0e-254 882.9 441 100.0
CDE04G0999 Ceratophyllum demersum HOM05D040252 ORTHO05D130106 1.3e-74 284.6 169 85.2
CDE06G0273 Ceratophyllum demersum HOM05D040252 ORTHO05D129702 3.1e-65 253.4 169 74.0
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 1.2e-53 214.9 310 47.7
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 2.9e-15 87.4 55 81.8
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 6.5e-15 86.3 55 80.0
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 1.5e-14 85.1 55 80.0
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 1.5e-14 85.1 66 66.7
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 1.9e-14 84.7 55 76.4
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 3.2e-14 84.0 55 76.4
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 4.2e-14 83.6 217 30.9
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 4.2e-14 83.6 55 76.4
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 4.2e-14 83.6 55 76.4
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 4.2e-14 83.6 55 74.5
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 5.5e-14 83.2 55 76.4
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 5.5e-14 83.2 55 76.4
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 9.4e-14 82.4 55 78.2
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 1.2e-13 82.0 55 76.4
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 1.2e-13 82.0 55 74.5
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 1.2e-13 82.0 55 76.4
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 1.2e-13 82.0 55 76.4
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 1.2e-13 82.0 55 74.5
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 1.2e-13 82.0 55 74.5
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.6e-13 81.6 55 76.4
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 1.6e-13 81.6 116 44.8
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 1.6e-13 81.6 55 74.5
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 1.6e-13 81.6 55 74.5
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 2.1e-13 81.3 129 43.4
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 2.1e-13 81.3 55 76.4
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 2.1e-13 81.3 199 34.7
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 2.7e-13 80.9 168 36.9
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 2.7e-13 80.9 55 74.5
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 2.7e-13 80.9 55 72.7
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 2.7e-13 80.9 55 76.4
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 3.6e-13 80.5 55 74.5
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 3.6e-13 80.5 215 34.4
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 3.6e-13 80.5 55 76.4
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 3.6e-13 80.5 168 37.5
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 4.7e-13 80.1 55 74.5
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 4.7e-13 80.1 55 72.7
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 4.7e-13 80.1 55 72.7
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 4.7e-13 80.1 55 72.7
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 4.7e-13 80.1 55 76.4
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.1e-13 79.7 74 60.8
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.1e-13 79.7 74 60.8
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.1e-13 79.7 74 60.8
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.1e-13 79.7 74 60.8
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 6.1e-13 79.7 74 60.8
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 6.1e-13 79.7 55 70.9
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 6.1e-13 79.7 55 70.9
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 6.1e-13 79.7 215 33.5
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 6.1e-13 79.7 55 72.7
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 8.0e-13 79.3 74 60.8
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 8.0e-13 79.3 55 72.7
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 8.0e-13 79.3 215 33.5
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 8.0e-13 79.3 193 33.2
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.0e-12 79.0 55 74.5
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 1.4e-12 78.6 55 72.7
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 1.4e-12 78.6 55 70.9
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 1.4e-12 78.6 197 33.5
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 1.4e-12 78.6 55 70.9
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 1.4e-12 78.6 197 33.5
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 1.8e-12 78.2 55 72.7
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 1.8e-12 78.2 55 76.4
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 1.8e-12 78.2 55 70.9
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.3e-12 77.8 55 69.1
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 2.3e-12 77.8 228 30.3
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 3.0e-12 77.4 172 33.7
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 4.0e-12 77.0 55 70.9
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 4.0e-12 77.0 55 70.9
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 4.0e-12 77.0 129 41.9
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 4.0e-12 77.0 55 70.9
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 6.8e-12 76.3 55 70.9
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 6.8e-12 76.3 55 69.1
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 6.8e-12 76.3 55 69.1
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 6.8e-12 76.3 209 31.6
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 6.8e-12 76.3 55 72.7
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 6.8e-12 76.3 55 72.7
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 6.8e-12 76.3 55 69.1
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 8.8e-12 75.9 55 67.3
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 1.2e-11 75.5 56 73.2
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.5e-11 75.1 55 69.1
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 1.5e-11 75.1 55 69.1
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 1.5e-11 75.1 55 70.9
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 1.5e-11 75.1 55 70.9
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 1.5e-11 75.1 55 67.3
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 2.0e-11 74.7 55 70.9
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.0e-11 74.7 55 69.1
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 2.6e-11 74.3 55 69.1
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 4.4e-11 73.6 55 65.5
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 7.5e-11 72.8 168 34.5
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 1.7e-10 71.6 172 34.9
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 2.2e-10 71.2 172 34.3
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 2.2e-10 71.2 203 32.0
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 2.2e-10 71.2 55 63.6
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 3.7e-10 70.5 54 66.7
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 4.9e-10 70.1 199 32.2
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 6.3e-10 69.7 55 67.3
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 1.1e-09 68.9 55 67.3
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 1.1e-09 68.9 55 67.3
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 1.1e-09 68.9 55 67.3
CDE06G0605 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 1.8e-09 68.2 129 39.5
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 4.1e-09 67.0 49 69.4
CDE06G0837 Ceratophyllum demersum HOM05D000050 ORTHO05D005594 4.1e-09 67.0 192 32.8
Actinidia23158 Actinidia chinensis HOM05D000497 ORTHO05D000020 5.4e-09 66.6 205 28.3
MBI15_g32285_MAGBIO Magnolia biondii HOM05D000497 ORTHO05D000020 2.0e-08 64.7 227 30.4
Actinidia11629 Actinidia chinensis HOM05D000497 ORTHO05D000020 5.9e-08 63.2 204 28.9
Dinv12286 Davidia involucrata HOM05D002514 ORTHO05D002761 5.9e-08 63.2 264 28.0
TAR636G1026 Trochodendron aralioides HOM05D000497 ORTHO05D000020 7.7e-08 62.8 169 30.8
CDE04G2923 Ceratophyllum demersum HOM05D000497 ORTHO05D000020 1.7e-07 61.6 168 31.5
Nitab4.5_0000586g0010 Nicotiana tabacum HOM05D000497 ORTHO05D000020 2.3e-07 61.2 181 31.5
Dinv28744 Davidia involucrata HOM05D000497 ORTHO05D000020 2.9e-07 60.8 197 29.9
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 1.5e-06 58.5 45 66.7
CDE03G0174 Ceratophyllum demersum HOM05D000497 ORTHO05D000020 1.9e-06 58.2 149 34.9
Lj2P1103T21 Lonicera japonica HOM05D000497 ORTHO05D000020 1.9e-06 58.2 173 26.6
Cfa012853 Carpinus fangiana HOM05D000497 ORTHO05D000020 2.5e-06 57.8 146 30.1
vmacro02868 Vaccinium macrocarpon HOM05D000497 ORTHO05D000020 2.5e-06 57.8 186 28.0
TAR633G0283 Trochodendron aralioides HOM05D000497 ORTHO05D000020 4.3e-06 57.0 184 31.0
Aqoxy4G03292 Aquilegia oxysepala HOM05D000497 ORTHO05D000020 5.6e-06 56.6 178 29.8


User provided reference genes

Program Settings