Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1108 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 4.2e-78 294.7 154 100.0
CDE02G0256 Ceratophyllum demersum HOM05D006047 ORTHO05D007353 6.4e-50 201.1 110 94.5
Gohir.A01G002200 Gossypium hirsutum HOM05D006047 ORTHO05D007353 6.4e-26 121.3 109 61.5
Gohir.D01G001800 Gossypium hirsutum HOM05D006047 ORTHO05D007353 2.4e-25 119.4 109 59.6
Cpa.g.sc20.97 Carica papaya HOM05D006047 ORTHO05D007353 4.2e-25 118.6 126 54.0
Gorai.002G002400 Gossypium raimondii HOM05D006047 ORTHO05D007353 4.2e-25 118.6 109 59.6
MBI16_g27295_MAGBIO Magnolia biondii HOM05D006047 ORTHO05D007353 2.7e-24 115.9 107 61.7
Sabra09G0105700 Salix brachista HOM05D006047 ORTHO05D007353 4.6e-24 115.2 119 54.6
CANSAT21G1105 Cannabis sativa HOM05D006047 ORTHO05D007353 6.0e-24 114.8 113 57.5
Potri.009G136100 Populus trichocarpa HOM05D006047 ORTHO05D007353 6.0e-24 114.8 119 53.8
Prupe.8G167000 Prunus persica HOM05D006047 ORTHO05D007353 6.0e-24 114.8 122 53.3
Sed0000957 Sechium edule HOM05D006047 ORTHO05D007353 6.0e-24 114.8 106 59.4
CsaV3_2G016180 Cucumis sativus L. HOM05D006047 ORTHO05D007353 1.3e-23 113.6 114 57.9
Manes.11G097000 Manihot esculenta HOM05D006047 ORTHO05D007353 1.7e-23 113.2 121 53.7
Thecc.02G058000 Theobroma cacao HOM05D006047 ORTHO05D007353 3.0e-23 112.5 113 54.9
ClCG02G012010 Citrullus lanatus HOM05D006047 ORTHO05D007353 6.6e-23 111.3 115 59.1
CiPaw.05G083500 Carya illinoinensis HOM05D006047 ORTHO05D007353 8.7e-23 110.9 123 52.8
Duzib132G0293 Durio zibethinus HOM05D006047 ORTHO05D007353 8.7e-23 110.9 109 56.0
Glyma.09G245500 Glycine max HOM05D006047 ORTHO05D007353 8.7e-23 110.9 108 58.3
Glyma.18G247500 Glycine max HOM05D006047 ORTHO05D007353 8.7e-23 110.9 109 56.9
HPP92_012949 Vanilla planifolia HOM05D006047 ORTHO05D007353 8.7e-23 110.9 127 53.5
RcHm_v2.0_Chr6g0278481 Rosa chinensis HOM05D006047 ORTHO05D007353 1.1e-22 110.5 106 58.5
Sed0015003 Sechium edule HOM05D006047 ORTHO05D007353 1.5e-22 110.2 115 55.7
Aqoxy1G03282 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 1.9e-22 109.8 112 58.0
MELO3C020826.2 Cucumis melo HOM05D006047 ORTHO05D007353 1.9e-22 109.8 114 56.1
TPR.G32107 Trifolium pratense HOM05D006047 ORTHO05D007353 2.5e-22 109.4 108 54.6
Lalb_Chr19g0126421 Lupinus albus HOM05D006047 ORTHO05D007353 3.3e-22 109.0 106 52.8
Psat3g100240 Pisum sativum HOM05D006047 ORTHO05D007353 4.3e-22 108.6 105 54.3
Ca_08043_v3 Cicer arietinum L. HOM05D006047 ORTHO05D007353 5.6e-22 108.2 105 55.2
Peaxi162Scf00362g00511 Petunia axillaris HOM05D006047 ORTHO05D007353 5.6e-22 108.2 116 54.3
PGR042G1307 Punica granatum HOM05D006047 ORTHO05D007353 5.6e-22 108.2 127 50.4
VMungo1383G0342 Vigna mungo HOM05D006047 ORTHO05D007353 5.6e-22 108.2 105 59.0
GSVIVG01024006001 Vitis vinifera HOM05D006047 ORTHO05D007353 5.6e-22 108.2 109 56.9
CiPaw.06G121100 Carya illinoinensis HOM05D006047 ORTHO05D007353 7.3e-22 107.8 118 52.5
MD10G1125900 Malus domestica HOM05D006047 ORTHO05D007353 7.3e-22 107.8 120 52.5
Nn6g31863 Nelumbo nucifera HOM05D006047 ORTHO05D007353 7.3e-22 107.8 122 53.3
HanXRQChr10g0300821 Helianthus annuus HOM05D006047 ORTHO05D007353 9.6e-22 107.5 109 56.9
TAR625G1286 Trochodendron aralioides HOM05D006047 ORTHO05D007353 9.6e-22 107.5 117 53.0
TAR625G1483 Trochodendron aralioides HOM05D006047 ORTHO05D007353 9.6e-22 107.5 117 53.0
COL.COLO4_17357 Corchorus olitorius HOM05D006047 ORTHO05D007353 1.3e-21 107.1 117 52.1
FAN15G3104 Fragaria x ananassa HOM05D006047 ORTHO05D007353 1.3e-21 107.1 106 56.6
Lsat_1_v5_gn_4_71821 Lactuca sativa HOM05D006047 ORTHO05D007353 1.3e-21 107.1 109 54.1
Lalb_Chr01g0021661 Lupinus albus HOM05D006047 ORTHO05D007353 1.6e-21 106.7 105 54.3
PSO782G4934 Papaver somniferum HOM05D006047 ORTHO05D007353 1.6e-21 106.7 126 50.8
Atru.chr5.3378 Acer truncatum HOM05D006047 ORTHO05D007353 2.1e-21 106.3 132 49.2
Ciclev10029458m.g Citrus clementina HOM05D006047 ORTHO05D007353 2.1e-21 106.3 131 51.9
FvH4_2g15480 Fragaria vesca HOM05D006047 ORTHO05D007353 2.1e-21 106.3 106 56.6
FAN20G3211 Fragaria x ananassa HOM05D006047 ORTHO05D007353 2.1e-21 106.3 106 56.6
FAN24G2638 Fragaria x ananassa HOM05D006047 ORTHO05D007353 2.1e-21 106.3 106 56.6
FAN27G2596 Fragaria x ananassa HOM05D001601 ORTHO05D002628 2.1e-21 106.3 106 56.6
Actinidia32040 Actinidia chinensis HOM05D006047 ORTHO05D007353 2.8e-21 105.9 105 56.2
Aqoxy3G00951 Aquilegia oxysepala HOM05D006047 ORTHO05D007353 2.8e-21 105.9 116 50.9
Duzib248G0446 Durio zibethinus HOM05D006047 ORTHO05D007353 2.8e-21 105.9 113 51.3
Eucgr.G01785 Eucalyptus grandis HOM05D006047 ORTHO05D007353 2.8e-21 105.9 127 51.2
MD05G1123100 Malus domestica HOM05D006047 ORTHO05D007353 2.8e-21 105.9 126 47.6
Medtr7g081070 Medicago truncatula HOM05D006047 ORTHO05D007353 2.8e-21 105.9 105 52.4
ECA234G0646 Erigeron canadensis HOM05D006047 ORTHO05D000476 3.6e-21 105.5 110 52.7
Lj1g0011713 Lotus japonicus HOM05D006047 ORTHO05D007353 3.6e-21 105.5 105 57.1
SGA_v2.0_scaffold207G41930 Striga asiatica HOM05D006047 ORTHO05D007353 3.6e-21 105.5 108 53.7
Actinidia21466 Actinidia chinensis HOM05D006047 ORTHO05D007353 4.8e-21 105.1 105 56.2
DCAR_003178 Daucus carota HOM05D006047 ORTHO05D007353 6.2e-21 104.8 105 55.2
PSO063G4836 Papaver somniferum HOM05D006047 ORTHO05D007353 6.2e-21 104.8 125 50.4
Phvul.008G049800 Phaseolus vulgaris HOM05D006047 ORTHO05D007353 6.2e-21 104.8 105 55.2
Cfa005258 Carpinus fangiana HOM05D006047 ORTHO05D007353 8.1e-21 104.4 122 50.0
Migut.N01327 Erythranthe guttata HOM05D006047 ORTHO05D007353 1.1e-20 104.0 117 52.1
Gohir.D02G226700 Gossypium hirsutum HOM05D006047 ORTHO05D007353 1.1e-20 104.0 114 53.5
Gorai.005G254600 Gossypium raimondii HOM05D006047 ORTHO05D007353 1.1e-20 104.0 114 53.5
PGSC0003DMG400006182 Solanum tuberosum HOM05D006047 ORTHO05D007353 1.1e-20 104.0 123 50.4
CSS0000109 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 1.4e-20 103.6 111 55.9
Rhsim05G0054100 Rhododendron simsii HOM05D006047 ORTHO05D007353 1.4e-20 103.6 116 50.9
Solyc01g111670.4 Solanum lycopersicum HOM05D006047 ORTHO05D007353 1.4e-20 103.6 119 55.5
Lsat_1_v5_gn_8_123180 Lactuca sativa HOM05D006047 ORTHO05D007353 1.8e-20 103.2 117 54.7
Gohir.A03G205400 Gossypium hirsutum HOM05D006047 ORTHO05D007353 2.4e-20 102.8 119 49.6
HanXRQChr12g0374651 Helianthus annuus HOM05D006047 ORTHO05D007353 2.4e-20 102.8 109 55.0
Hma1.2p1_0163F.1_g072560 Hydrangea macrophylla HOM05D006047 ORTHO05D007353 2.4e-20 102.8 119 49.6
Sopen01g053710 Solanum pennellii HOM05D006047 ORTHO05D007353 3.1e-20 102.4 119 52.9
vmacro17314 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 3.1e-20 102.4 115 51.3
EL10Ac9g21359 Beta vulgaris HOM05D006047 ORTHO05D007353 5.3e-20 101.7 113 48.7
Aa31LG6G16610 Aethionema arabicum HOM05D006047 ORTHO05D007353 9.0e-20 100.9 109 50.5
unitig_52.g17373 Utricularia gibba HOM05D006047 ORTHO05D007353 9.0e-20 100.9 111 53.2
Actinidia39157 Actinidia chinensis HOM05D006047 ORTHO05D007353 1.5e-19 100.1 105 54.3
Dinv41931 Davidia involucrata HOM05D006047 ORTHO05D007353 1.5e-19 100.1 117 52.1
AUR62010029 Chenopodium quinoa HOM05D006047 ORTHO05D007353 2.0e-19 99.8 117 49.6
AUR62013019 Chenopodium quinoa HOM05D006047 ORTHO05D007353 2.0e-19 99.8 117 49.6
MD05G1195600 Malus domestica HOM05D006047 ORTHO05D007353 2.0e-19 99.8 133 48.9
Sc08g0002850 Simmondsia chinensis HOM05D006047 ORTHO05D007353 2.0e-19 99.8 109 54.1
SHI05754 Sapria himalayana HOM05D006047 ORTHO05D007353 5.8e-19 98.2 107 49.5
AL4G10070 Arabidopsis lyrata HOM05D006047 ORTHO05D007353 7.6e-19 97.8 114 49.1
QL11p050986 Quercus lobata HOM05D006047 ORTHO05D007353 1.7e-18 96.7 127 45.7
THA.LOC104824759 Tarenaya hassleriana HOM05D006047 ORTHO05D007353 1.7e-18 96.7 108 50.0
Ah.01g023100 Amaranthus hybridus HOM05D006047 ORTHO05D007353 2.9e-18 95.9 108 48.1
AT2G20940 Arabidopsis thaliana HOM05D006047 ORTHO05D007353 2.9e-18 95.9 111 47.7
Sopen11g024350 Solanum pennellii HOM05D006047 ORTHO05D007353 2.9e-18 95.9 119 50.4
Zm00001eb331780 Zea mays HOM05D006047 ORTHO05D007353 2.9e-18 95.9 123 43.9
vmacro17313 Vaccinium macrocarpon HOM05D006047 ORTHO05D007353 3.8e-18 95.5 115 48.7
CARHR174220 Cardamine hirsuta HOM05D006047 ORTHO05D007353 1.4e-17 93.6 114 46.5
Cc09_g09850 Coffea canephora HOM05D006047 ORTHO05D007353 1.4e-17 93.6 121 49.6
Carub.0004s0003 Capsella rubella HOM05D006047 ORTHO05D007353 1.9e-17 93.2 114 46.5
ATR0064G037 Amborella trichopoda HOM05D006047 ORTHO05D007353 4.2e-17 92.0 125 45.6
Haze_02125 Corylus avellana HOM05D006047 ORTHO05D007353 4.2e-17 92.0 119 46.2
SGA_v2.0_scaffold80G25840 Striga asiatica HOM05D006047 ORTHO05D007353 4.2e-17 92.0 108 50.0
Sp4g00130 Schrenkiella parvula HOM05D006047 ORTHO05D007353 5.4e-17 91.7 108 46.3
Thhalv10000376m.g Eutrema salsugineum HOM05D006047 ORTHO05D007353 7.1e-17 91.3 111 45.0
Zm00001eb103880 Zea mays HOM05D006047 ORTHO05D007353 7.1e-17 91.3 124 43.5
SEGI_27161 Sequoiadendron giganteum HOM05D006047 ORTHO05D007353 4.6e-16 88.6 109 47.7
A04p15840 Brassica napus HOM05D006047 ORTHO05D007353 6.0e-16 88.2 108 44.4
C04p50240 Brassica napus HOM05D006047 ORTHO05D007353 6.0e-16 88.2 108 44.4
BolC4t26624H Brassica oleracea HOM05D006047 ORTHO05D007353 6.0e-16 88.2 108 44.4
BraA04t17215Z Brassica rapa HOM05D006047 ORTHO05D007353 6.0e-16 88.2 108 44.4
BcaB06g27764 Brassica carinata HOM05D006047 ORTHO05D007353 7.9e-16 87.8 108 44.4
Solyc03g044590.2 Solanum lycopersicum HOM05D006047 ORTHO05D007353 3.9e-15 85.5 104 51.0
CSS0028471 Camellia sinensis var. sinensis HOM05D006047 ORTHO05D007353 6.6e-15 84.7 122 43.4
TWI31G0769 Tripterygium wilfordii HOM05D006047 ORTHO05D007353 1.9e-14 83.2 114 45.6
AagrBONN_evm.TU.Sc2ySwM_362.1962 Anthoceros agrestis HOM05D006047 ORTHO05D007353 2.1e-13 79.7 108 44.4
BcaB01g02958 Brassica carinata HOM05D006047 ORTHO05D007353 2.1e-13 79.7 108 41.7
Nitab4.5_0003914g0120 Nicotiana tabacum HOM05D006047 ORTHO05D007353 2.8e-13 79.3 122 43.4
Nitab4.5_0000283g0480 Nicotiana tabacum HOM05D006047 ORTHO05D007353 6.2e-13 78.2 52 75.0
Pp3c24_20200 Physcomitrium patens HOM05D006047 ORTHO05D007353 8.1e-13 77.8 109 44.0
CAN.G588.87 Capsicum annuum HOM05D006047 ORTHO05D007353 2.0e-11 73.2 56 66.1
Sed0002860 Sechium edule HOM05D006047 ORTHO05D007353 4.5e-11 72.0 70 57.1
Sed0021144 Sechium edule HOM05D006047 ORTHO05D007353 4.5e-11 72.0 51 68.6
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 9.9e-11 70.9 108 41.7
SalBow5G2603 Salvia bowleyana HOM05D006047 ORTHO05D007353 1.1e-09 67.4 99 42.4
SMO367G0473 Selaginella moellendorffii HOM05D006047 ORTHO05D007353 2.4e-09 66.2 127 42.5
HPP92_025899 Vanilla planifolia HOM05D006047 ORTHO05D007353 1.2e-08 63.9 77 48.1
PGR083G0073 Punica granatum HOM05D006047 ORTHO05D007353 4.6e-08 62.0 105 39.0
TAR624G0128 Trochodendron aralioides HOM05D006047 ORTHO05D007353 6.7e-07 58.2 61 50.8


User provided reference genes

Program Settings