Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1093 Ceratophyllum demersum HOM05D000718 ORTHO05D007431 1.4e-265 919.1 456 100.0
Dinv18364 Davidia involucrata HOM05D000718 ORTHO05D007431 6.2e-178 627.9 462 67.7
Rhsim06G0207800 Rhododendron simsii HOM05D000718 ORTHO05D007431 1.0e-175 620.5 457 66.1
MBI07_g09566_MAGBIO Magnolia biondii HOM05D000718 ORTHO05D007431 2.9e-175 619.0 506 62.1
GSVIVG01014199001 Vitis vinifera HOM05D000718 ORTHO05D007431 3.8e-175 618.6 457 66.5
Lj3g0001987 Lotus japonicus HOM05D000718 ORTHO05D007431 3.2e-174 615.5 459 65.6
PGR031G2045 Punica granatum HOM05D000718 ORTHO05D007431 4.2e-174 615.1 457 65.6
Actinidia12577 Actinidia chinensis HOM05D000718 ORTHO05D007431 1.6e-173 613.2 457 66.7
Lj1A829G32 Lonicera japonica HOM05D000718 ORTHO05D007431 7.9e-173 610.9 453 65.1
MD03G1243500 Malus domestica HOM05D000718 ORTHO05D007431 1.0e-172 610.5 451 65.4
Thecc.07G114900 Theobroma cacao HOM05D000718 ORTHO05D007431 1.3e-172 610.1 458 64.8
Duzib187G1570 Durio zibethinus HOM05D000718 ORTHO05D007431 3.0e-172 609.0 458 64.4
Eucgr.K01884 Eucalyptus grandis HOM05D000718 ORTHO05D007431 3.3e-171 605.5 455 64.8
PGSC0003DMG400007071 Solanum tuberosum HOM05D000718 ORTHO05D007431 1.3e-170 603.6 456 65.4
Nitab4.5_0003565g0040 Nicotiana tabacum HOM05D000718 ORTHO05D007431 3.7e-170 602.1 460 64.3
TPR.G16488 Trifolium pratense HOM05D000718 ORTHO05D007431 6.3e-170 601.3 455 63.7
Atru.chr2.2147 Acer truncatum HOM05D000718 ORTHO05D007431 1.8e-169 599.7 451 65.0
CiPaw.11G160400 Carya illinoinensis HOM05D000718 ORTHO05D007431 1.8e-169 599.7 456 64.0
COL.COLO4_17547 Corchorus olitorius HOM05D000718 ORTHO05D007431 1.8e-169 599.7 472 62.9
RcHm_v2.0_Chr5g0030941 Rosa chinensis HOM05D000718 ORTHO05D007431 2.4e-169 599.4 454 63.9
Sopen07g030690 Solanum pennellii HOM05D000718 ORTHO05D007431 2.4e-169 599.4 456 65.1
Prupe.4G164800 Prunus persica HOM05D000718 ORTHO05D007431 3.1e-169 599.0 451 64.1
Ca_12194_v3 Cicer arietinum L. HOM05D000718 ORTHO05D007431 6.9e-169 597.8 455 64.4
FvH4_3g18310 Fragaria vesca HOM05D000718 ORTHO05D007431 6.9e-169 597.8 454 63.7
Solyc07g062450.3 Solanum lycopersicum HOM05D000718 ORTHO05D007431 6.9e-169 597.8 456 64.7
THA.LOC104822564 Tarenaya hassleriana HOM05D000718 ORTHO05D007431 6.9e-169 597.8 452 65.3
Oeu025333.1 Olea europaea HOM05D000718 ORTHO05D007431 9.0e-169 597.4 458 64.0
CANSAT35G0289 Cannabis sativa HOM05D000718 ORTHO05D007431 1.5e-168 596.7 453 65.1
Nitab4.5_0006953g0050 Nicotiana tabacum HOM05D000718 ORTHO05D007431 2.6e-168 595.9 456 64.3
PSO782G3001 Papaver somniferum HOM05D000718 ORTHO05D007431 7.6e-168 594.3 459 63.6
PSO478G1672 Papaver somniferum HOM05D000718 ORTHO05D007431 2.2e-167 592.8 459 63.4
Psat0s1037g0040 Pisum sativum HOM05D000718 ORTHO05D007431 2.9e-167 592.4 457 63.2
TWI39G0589 Tripterygium wilfordii HOM05D000718 ORTHO05D007431 3.8e-167 592.0 455 64.2
Migut.H01998 Erythranthe guttata HOM05D000718 ORTHO05D007431 3.2e-166 589.0 463 63.1
Gorai.002G054700 Gossypium raimondii HOM05D000718 ORTHO05D007431 3.2e-166 589.0 458 61.8
CAN.G375.14 Capsicum annuum HOM05D000718 ORTHO05D007431 4.2e-166 588.6 456 63.6
FAN25G1161 Fragaria x ananassa HOM05D000718 ORTHO05D007431 4.2e-166 588.6 454 62.8
vmacro23465 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 4.2e-166 588.6 471 62.4
FAN16G1727 Fragaria x ananassa HOM05D000718 ORTHO05D007431 7.2e-166 587.8 463 62.2
Gohir.D01G042724 Gossypium hirsutum HOM05D000718 ORTHO05D007431 9.3e-166 587.4 458 61.6
Lalb_Chr01g0006831 Lupinus albus HOM05D000718 ORTHO05D007431 1.2e-165 587.0 451 64.5
Haze_09324 Corylus avellana HOM05D000718 ORTHO05D007431 2.1e-165 586.3 468 63.2
Cfa019567 Carpinus fangiana HOM05D000718 ORTHO05D007431 2.7e-165 585.9 443 65.9
SalBow7G4178 Salvia bowleyana HOM05D000718 ORTHO05D007431 3.6e-165 585.5 460 62.4
Cc05_g11090 Coffea canephora HOM05D000718 ORTHO05D007431 6.1e-165 584.7 451 63.9
Ah.04g164270 Amaranthus hybridus HOM05D000718 ORTHO05D007431 1.0e-164 583.9 456 62.5
Gohir.A01G054400 Gossypium hirsutum HOM05D000718 ORTHO05D007431 1.3e-164 583.6 458 61.8
QL08p026242 Quercus lobata HOM05D000718 ORTHO05D007431 2.3e-164 582.8 468 63.9
SalBow7G4376 Salvia bowleyana HOM05D000718 ORTHO05D007431 2.3e-164 582.8 460 62.0
Sed0007644 Sechium edule HOM05D000718 ORTHO05D007431 3.0e-164 582.4 459 62.5
arahy.Tifrunner.gnm1.ann1.6IHZ0U Arachis hypogaea HOM05D000718 ORTHO05D007431 5.1e-164 581.6 459 62.5
Aqoxy4G00321 Aquilegia oxysepala HOM05D000718 ORTHO05D007431 8.7e-164 580.9 465 60.9
FAN11G0057 Fragaria x ananassa HOM05D000718 ORTHO05D007431 8.7e-164 580.9 454 62.8
Peaxi162Scf00111g01475 Petunia axillaris HOM05D000718 ORTHO05D007431 1.1e-163 580.5 456 61.8
ClCG11G017460 Citrullus lanatus HOM05D000718 ORTHO05D007431 2.5e-163 579.3 458 63.5
Medtr8g464030 Medicago truncatula HOM05D000718 ORTHO05D007431 3.3e-163 578.9 496 58.7
MELO3C025639.2 Cucumis melo HOM05D000718 ORTHO05D007431 7.4e-163 577.8 458 64.0
Potri.001G390700 Populus trichocarpa HOM05D000718 ORTHO05D007431 7.4e-163 577.8 457 61.7
arahy.Tifrunner.gnm1.ann1.STN4DM Arachis hypogaea HOM05D000718 ORTHO05D007431 1.3e-162 577.0 457 62.8
EL10Ac4g08344 Beta vulgaris HOM05D000718 ORTHO05D007431 1.3e-162 577.0 456 61.6
ATR0602G196 Amborella trichopoda HOM05D000718 ORTHO05D007431 1.6e-162 576.6 454 63.4
CARHR089850 Cardamine hirsuta HOM05D000718 ORTHO05D007431 2.8e-162 575.9 452 62.6
Hund02254 Selenicereus undatus HOM05D000718 ORTHO05D007431 2.8e-162 575.9 457 61.9
Thhalv10020708m.g Eutrema salsugineum HOM05D000718 ORTHO05D007431 3.7e-162 575.5 452 62.8
AT3G14910 Arabidopsis thaliana HOM05D000718 ORTHO05D007431 4.8e-162 575.1 452 62.2
Carub.0003s1457 Capsella rubella HOM05D000718 ORTHO05D007431 4.8e-162 575.1 452 62.4
SGA_v2.0_scaffold130G34293 Striga asiatica HOM05D000718 ORTHO05D007431 4.8e-162 575.1 452 62.8
AL3G27230 Arabidopsis lyrata HOM05D000718 ORTHO05D007431 6.3e-162 574.7 452 61.9
Glyma.12G157600 Glycine max HOM05D000718 ORTHO05D007431 1.4e-161 573.5 458 62.2
DCAR_013156 Daucus carota HOM05D000718 ORTHO05D007431 6.9e-161 571.2 450 62.4
AUR62042779 Chenopodium quinoa HOM05D000718 ORTHO05D007431 9.1e-161 570.9 466 60.3
Glyma.06G228900 Glycine max HOM05D000718 ORTHO05D007431 1.2e-160 570.5 455 62.2
Aa31LG8G2120 Aethionema arabicum HOM05D000718 ORTHO05D007431 3.4e-160 568.9 452 63.3
BolC5t33913H Brassica oleracea HOM05D000718 ORTHO05D007431 2.2e-159 566.2 452 62.2
Lalb_Chr03g0031171 Lupinus albus HOM05D000718 ORTHO05D007431 8.5e-159 564.3 457 62.4
Phvul.011G162200 Phaseolus vulgaris HOM05D000718 ORTHO05D007431 1.1e-158 563.9 457 61.7
A05p34500 Brassica napus HOM05D000718 ORTHO05D007431 1.4e-158 563.5 450 62.2
BraA05t22270Z Brassica rapa HOM05D000718 ORTHO05D007431 1.4e-158 563.5 450 62.2
Nn1g09174 Nelumbo nucifera HOM05D000718 ORTHO05D007431 1.4e-158 563.5 460 61.1
ECA240G1747 Erigeron canadensis HOM05D000718 ORTHO05D007431 2.7e-157 559.3 456 60.7
HanXRQChr15g0476211 Helianthus annuus HOM05D000718 ORTHO05D007431 4.6e-157 558.5 458 61.4
BcaB06g25332 Brassica carinata HOM05D000718 ORTHO05D007431 1.0e-156 557.4 449 61.5
Lsat_1_v5_gn_9_99900 Lactuca sativa HOM05D000718 ORTHO05D007431 1.0e-156 557.4 452 61.5
Nn1g04439 Nelumbo nucifera HOM05D000718 ORTHO05D007431 1.4e-156 557.0 426 64.6
CSS0021542 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 5.9e-152 541.6 439 60.6
C05p52240 Brassica napus HOM05D000718 ORTHO05D007431 2.7e-149 532.7 437 60.6
Manes.03G101200 Manihot esculenta HOM05D000718 ORTHO05D007431 9.1e-145 517.7 404 62.4
HPP92_023429 Vanilla planifolia HOM05D000718 ORTHO05D007431 2.6e-144 516.2 460 58.3
FAN21G3716 Fragaria x ananassa HOM05D000718 ORTHO05D007431 2.9e-143 512.7 411 61.1
vmacro11939 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 2.5e-142 509.6 470 56.2
VMungo1127G0879 Vigna mungo HOM05D000718 ORTHO05D007431 3.3e-139 499.2 465 56.6
CSS0043856 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 1.8e-137 493.4 455 56.3
unitig_52.g17395 Utricularia gibba HOM05D000718 ORTHO05D007431 3.8e-135 485.7 459 55.1
AUR62019575 Chenopodium quinoa HOM05D000718 ORTHO05D007431 1.2e-131 474.2 422 56.4
SEGI_16322 Sequoiadendron giganteum HOM05D000718 ORTHO05D007431 7.5e-131 471.5 449 53.7
Os09g0315800 Oryza sativa ssp. japonica HOM05D000718 ORTHO05D007431 9.8e-131 471.1 453 53.4
CSS0014195 Camellia sinensis var. sinensis HOM05D000718 ORTHO05D007431 1.3e-130 470.7 456 52.9
Ciclev10021305m.g Citrus clementina HOM05D000718 ORTHO05D007431 1.0e-124 451.1 306 71.6
Zm00001eb309730 Zea mays HOM05D000718 ORTHO05D007431 8.0e-117 424.9 342 59.9
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 1.2e-112 411.0 414 54.1
MD11G1263600 Malus domestica HOM05D000718 ORTHO05D007431 2.2e-106 390.2 281 67.6
Sc16g0007570 Simmondsia chinensis HOM05D000718 ORTHO05D007431 3.5e-104 382.9 298 64.1
vmacro11937 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 1.4e-97 360.9 330 56.1
AagrBONN_evm.TU.Sc2ySwM_228.1801 Anthoceros agrestis HOM05D000718 ORTHO05D007431 8.9e-92 341.7 457 42.0
CsaV3_4G033110 Cucumis sativus L. HOM05D000718 ORTHO05D007431 7.6e-91 338.6 302 56.6
vmacro23384 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 5.4e-89 332.4 342 51.5
Pp3c4_25540 Physcomitrium patens HOM05D000718 ORTHO05D007431 3.0e-87 326.6 470 39.1
SMO367G0522 Selaginella moellendorffii HOM05D000718 ORTHO05D007431 4.7e-85 319.3 461 42.5
SHI27609 Sapria himalayana HOM05D000718 ORTHO05D007431 8.1e-85 318.5 405 42.0
Mapoly0061s0004 Marchantia polymorpha HOM05D000718 ORTHO05D007431 5.1e-79 299.3 452 39.8
Thecc.07G114700 Theobroma cacao HOM05D000718 ORTHO05D007431 3.3e-78 296.6 379 44.3
BcaB06g29518 Brassica carinata HOM05D000718 ORTHO05D002712 1.6e-77 294.3 450 41.8
Psat4g090840 Pisum sativum HOM05D000718 ORTHO05D007431 6.0e-72 275.8 246 59.8
vmacro11938 Vaccinium macrocarpon HOM05D000718 ORTHO05D007431 6.9e-68 262.3 298 47.0
Sp3g13120 Schrenkiella parvula HOM05D000718 ORTHO05D007431 4.5e-67 259.6 222 54.1
MSTRG.14233 Avicennia marina HOM05D000718 ORTHO05D007431 7.9e-56 222.2 233 51.1
Psat3g077000 Pisum sativum HOM05D000718 ORTHO05D007431 3.9e-55 219.9 253 45.8
Sc16g0007580 Simmondsia chinensis HOM05D000718 ORTHO05D007431 5.1e-47 193.0 163 57.7
Thecc.07G115900 Theobroma cacao HOM05D000718 ORTHO05D007431 7.7e-43 179.1 162 53.7
Hund02252 Selenicereus undatus HOM05D000718 ORTHO05D007431 1.1e-38 165.2 161 57.1
TAR627G0847 Trochodendron aralioides HOM05D000718 ORTHO05D007431 2.0e-35 154.5 127 58.3
PGSC0003DMG400011947 Solanum tuberosum HOM05D000718 ORTHO05D007431 2.0e-30 137.9 120 57.5
Cpa.g.sc77.7 Carica papaya HOM05D000718 ORTHO05D007431 7.0e-28 129.4 112 52.7
Thecc.07G115200 Theobroma cacao HOM05D000718 ORTHO05D007431 1.2e-27 128.6 124 50.0
MD11G1263700 Malus domestica HOM05D000718 ORTHO05D007431 3.5e-27 127.1 116 50.9
Psat2g113040 Pisum sativum HOM05D000718 ORTHO05D004709 6.5e-26 122.9 107 57.9
CBR_g49411 Chara braunii HOM05D000019 ORTHO05D000353 1.4e-23 115.2 413 28.8
CAN.G713.20 Capsicum annuum HOM05D000718 ORTHO05D007431 6.1e-16 89.7 85 51.8
Thecc.07G113800 Theobroma cacao HOM05D000718 ORTHO05D007431 5.7e-14 83.2 63 65.1
Thecc.07G114100 Theobroma cacao HOM05D000718 ORTHO05D007431 2.4e-12 77.8 52 71.2
Thecc.07G114000 Theobroma cacao HOM05D000718 ORTHO05D007431 2.0e-11 74.7 100 41.0
Lsat_1_v5_gn_9_99920 Lactuca sativa HOM05D000718 ORTHO05D007431 5.0e-10 70.1 54 64.8


User provided reference genes

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