Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1044 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 1.4e-147 526.2 256 100.0
CDE06G0136 Ceratophyllum demersum HOM05D006345 ORTHO05D007428 3.3e-128 461.8 233 95.3
Nn3g17198 Nelumbo nucifera HOM05D006345 ORTHO05D007428 5.4e-94 348.2 268 65.3
Sc05g0003040 Simmondsia chinensis HOM05D006345 ORTHO05D007428 5.9e-93 344.7 252 67.1
TAR624G0710 Trochodendron aralioides HOM05D006345 ORTHO05D007428 6.6e-92 341.3 251 68.5
ClCG02G007550 Citrullus lanatus HOM05D006345 ORTHO05D007428 1.6e-90 336.7 262 64.1
Sed0017834 Sechium edule HOM05D006345 ORTHO05D007428 2.1e-90 336.3 252 65.5
CANSAT11G1250 Cannabis sativa HOM05D006345 ORTHO05D007428 6.1e-90 334.7 217 73.3
Ca_19950_v3 Cicer arietinum L. HOM05D006345 ORTHO05D007428 6.1e-90 334.7 249 66.3
MBI16_g30839_MAGBIO Magnolia biondii HOM05D006345 ORTHO05D007428 8.0e-90 334.3 256 65.2
Sed0021159 Sechium edule HOM05D006345 ORTHO05D007428 8.0e-90 334.3 213 73.7
Psat7g230920 Pisum sativum HOM05D006345 ORTHO05D007428 2.3e-89 332.8 211 73.5
VMungo1383G2204 Vigna mungo HOM05D006345 ORTHO05D007428 3.0e-89 332.4 257 63.4
TPR.G7580 Trifolium pratense HOM05D006345 ORTHO05D007428 5.2e-89 331.6 219 71.2
MELO3C018575.2 Cucumis melo HOM05D006345 ORTHO05D007428 6.8e-89 331.3 248 65.3
Dinv19690 Davidia involucrata HOM05D006345 ORTHO05D007428 8.9e-89 330.9 248 65.3
Medtr4g024860 Medicago truncatula HOM05D000001 ORTHO05D000003 1.2e-88 330.5 211 73.9
Phvul.003G037201 Phaseolus vulgaris HOM05D006345 ORTHO05D007428 1.2e-88 330.5 254 62.6
CiPaw.01G263700 Carya illinoinensis HOM05D006345 ORTHO05D007428 3.4e-88 328.9 213 71.4
Glyma.03G027700 Glycine max HOM05D006345 ORTHO05D007428 4.4e-88 328.6 250 64.8
TWI53G2073 Tripterygium wilfordii HOM05D006345 ORTHO05D007428 7.5e-88 327.8 252 63.1
CSS0008102 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 1.3e-87 327.0 216 70.4
CsaV3_7G007230 Cucumis sativus L. HOM05D006345 ORTHO05D007428 1.3e-87 327.0 248 64.5
Sabra01G0052000 Salix brachista HOM05D006345 ORTHO05D007428 1.3e-87 327.0 252 63.5
Glyma.01G139633 Glycine max HOM05D006345 ORTHO05D007428 1.7e-87 326.6 253 63.2
Manes.16G061100 Manihot esculenta HOM05D006345 ORTHO05D007428 2.2e-87 326.2 251 65.7
Duzib212G0272 Durio zibethinus HOM05D006345 ORTHO05D007428 4.9e-87 325.1 211 71.6
ECA238G2485 Erigeron canadensis HOM05D006345 ORTHO05D007428 4.9e-87 325.1 211 70.1
Ciclev10016345m.g Citrus clementina HOM05D006345 ORTHO05D007428 1.1e-86 323.9 211 71.1
HanXRQChr14g0447431 Helianthus annuus HOM05D006345 ORTHO05D007428 1.4e-86 323.6 211 70.1
Lj3g0013440 Lotus japonicus HOM05D006345 ORTHO05D007428 1.4e-86 323.6 219 69.9
Thecc.04G283900 Theobroma cacao HOM05D006345 ORTHO05D007428 1.4e-86 323.6 252 63.9
Rhsim13G0136400 Rhododendron simsii HOM05D006345 ORTHO05D007428 1.8e-86 323.2 211 72.5
arahy.Tifrunner.gnm1.ann1.G9BQRV Arachis hypogaea HOM05D006345 ORTHO05D007428 3.1e-86 322.4 211 72.0
Prupe.4G121300 Prunus persica HOM05D006345 ORTHO05D007428 3.1e-86 322.4 211 72.5
RcHm_v2.0_Chr5g0022101 Rosa chinensis HOM05D006345 ORTHO05D007428 3.1e-86 322.4 251 64.5
Aqoxy7G02153 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 4.1e-86 322.0 211 70.6
QL08p052794 Quercus lobata HOM05D006345 ORTHO05D007428 4.1e-86 322.0 211 70.1
arahy.Tifrunner.gnm1.ann1.S1VR06 Arachis hypogaea HOM05D006345 ORTHO05D007428 5.4e-86 321.6 211 71.6
CiPaw.14G048700 Carya illinoinensis HOM05D006345 ORTHO05D007428 5.4e-86 321.6 212 70.3
Migut.D00572 Erythranthe guttata HOM05D006345 ORTHO05D007428 7.0e-86 321.2 253 61.7
Lalb_Chr07g0189941 Lupinus albus HOM05D006345 ORTHO05D007428 7.0e-86 321.2 211 73.0
arahy.Tifrunner.gnm1.ann1.P3RVZQ Arachis hypogaea HOM05D006345 ORTHO05D007428 9.2e-86 320.9 211 71.6
FAN11G3812 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.2e-85 320.5 224 68.8
Eucgr.F03783 Eucalyptus grandis HOM05D006345 ORTHO05D007428 2.0e-85 319.7 252 63.9
FvH4_3g13390 Fragaria vesca HOM05D006345 ORTHO05D007428 2.0e-85 319.7 211 71.6
FAN21G0075 Fragaria x ananassa HOM05D006345 ORTHO05D007428 2.0e-85 319.7 211 71.6
arahy.Tifrunner.gnm1.ann1.W97VC3 Arachis hypogaea HOM05D006345 ORTHO05D007428 2.7e-85 319.3 211 71.1
PGR042G3945 Punica granatum HOM05D006345 ORTHO05D007428 2.7e-85 319.3 251 62.2
SalBow7G0027 Salvia bowleyana HOM05D006345 ORTHO05D007428 4.5e-85 318.5 209 69.9
COL.COLO4_13882 Corchorus olitorius HOM05D006345 ORTHO05D007428 1.0e-84 317.4 252 63.9
MD05G1242200 Malus domestica HOM05D006345 ORTHO05D007428 1.0e-84 317.4 211 70.6
FAN25G2350 Fragaria x ananassa HOM05D006345 ORTHO05D007428 1.3e-84 317.0 224 68.3
Nitab4.5_0008647g0020 Nicotiana tabacum HOM05D006345 ORTHO05D007428 1.3e-84 317.0 211 70.6
Oeu012935.1 Olea europaea HOM05D006345 ORTHO05D007428 1.3e-84 317.0 210 69.0
Oeu017184.1 Olea europaea HOM05D006345 ORTHO05D007428 1.3e-84 317.0 211 70.1
Nitab4.5_0001925g0110 Nicotiana tabacum HOM05D006345 ORTHO05D007428 2.3e-84 316.2 226 66.8
Lalb_Chr13g0291791 Lupinus albus HOM05D006345 ORTHO05D007428 2.9e-84 315.8 212 71.7
unitig_52.g17581 Utricularia gibba HOM05D006345 ORTHO05D007428 2.9e-84 315.8 245 63.3
MSTRG.21400 Avicennia marina HOM05D006345 ORTHO05D007428 6.6e-84 314.7 211 68.7
Gorai.011G189500 Gossypium raimondii HOM05D006345 ORTHO05D007428 8.6e-84 314.3 213 70.0
Potri.001G073700 Populus trichocarpa HOM05D006345 ORTHO05D007428 8.6e-84 314.3 211 69.7
Cpa.g.sc12.137 Carica papaya HOM05D006345 ORTHO05D007428 1.9e-83 313.2 213 68.5
DCAR_001254 Daucus carota HOM05D006345 ORTHO05D007428 1.9e-83 313.2 245 61.2
Gohir.A10G163600 Gossypium hirsutum HOM05D006345 ORTHO05D007428 1.9e-83 313.2 213 69.5
Peaxi162Scf00062g10131 Petunia axillaris HOM05D006345 ORTHO05D007428 1.9e-83 313.2 211 69.2
PGSC0003DMG400023836 Solanum tuberosum HOM05D006345 ORTHO05D007428 1.9e-83 313.2 211 69.2
FAN16G3736 Fragaria x ananassa HOM05D006345 ORTHO05D007428 2.5e-83 312.8 211 70.6
CAN.G575.62 Capsicum annuum HOM05D006345 ORTHO05D007428 4.3e-83 312.0 211 68.7
Cc06_g02140 Coffea canephora HOM05D006345 ORTHO05D007428 4.3e-83 312.0 213 67.1
EL10Ac3g05939 Beta vulgaris HOM05D006345 ORTHO05D007428 5.6e-83 311.6 248 61.7
Aqoxy3G02382 Aquilegia oxysepala HOM05D006345 ORTHO05D007428 7.3e-83 311.2 211 68.7
PSO675G7514 Papaver somniferum HOM05D006345 ORTHO05D007428 7.3e-83 311.2 278 59.7
Cc09_g04580 Coffea canephora HOM05D006345 ORTHO05D007428 2.1e-82 309.7 213 67.1
THA.LOC104822694 Tarenaya hassleriana HOM05D006345 ORTHO05D007428 2.1e-82 309.7 211 69.7
Ah.07g202050 Amaranthus hybridus HOM05D006345 ORTHO05D007428 2.8e-82 309.3 241 64.3
Os03g0824200 Oryza sativa ssp. japonica HOM05D006345 ORTHO05D007428 2.8e-82 309.3 236 63.6
SalBow2G1193 Salvia bowleyana HOM05D006345 ORTHO05D007428 2.8e-82 309.3 209 67.9
HPP92_018755 Vanilla planifolia HOM05D006345 ORTHO05D007428 4.7e-82 308.5 244 61.9
Lsat_1_v5_gn_3_103240 Lactuca sativa HOM05D006345 ORTHO05D007428 6.1e-82 308.1 237 63.3
Gohir.D10G170000 Gossypium hirsutum HOM05D006345 ORTHO05D007428 8.0e-82 307.8 213 68.5
Sopen12g034690 Solanum pennellii HOM05D006345 ORTHO05D007428 4.0e-81 305.4 211 67.3
SGA_v2.0_scaffold8G04616 Striga asiatica HOM05D006345 ORTHO05D007428 4.0e-81 305.4 211 67.8
Zm00001eb211470 Zea mays HOM05D006345 ORTHO05D007428 1.2e-80 303.9 233 63.9
Ah.15g099610 Amaranthus hybridus HOM05D006345 ORTHO05D007428 2.6e-80 302.8 212 68.4
Carub.0003s1288 Capsella rubella HOM05D006345 ORTHO05D007428 3.4e-80 302.4 211 68.2
PSO541G0968 Papaver somniferum HOM05D006345 ORTHO05D007428 4.4e-80 302.0 278 58.6
ATR0561G247 Amborella trichopoda HOM05D006345 ORTHO05D007428 7.5e-80 301.2 249 61.0
AUR62015383 Chenopodium quinoa HOM05D006345 ORTHO05D007428 1.3e-79 300.4 212 67.5
PSO782G3410 Papaver somniferum HOM05D006345 ORTHO05D007428 2.2e-79 299.7 214 69.2
AT3G13440 Arabidopsis thaliana HOM05D006345 ORTHO05D007428 8.3e-79 297.7 211 67.3
Thhalv10021414m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 4.1e-78 295.4 211 66.8
CARHR088090 Cardamine hirsuta HOM05D006345 ORTHO05D007428 5.4e-78 295.0 211 66.8
Carub.0006s3398 Capsella rubella HOM05D006345 ORTHO05D007428 9.2e-78 294.3 211 66.4
AL3G25340 Arabidopsis lyrata HOM05D006345 ORTHO05D007428 1.2e-77 293.9 211 66.4
BcaC09g48312 Brassica carinata HOM05D006345 ORTHO05D007428 4.6e-77 292.0 232 60.8
C01p51620 Brassica napus HOM05D006345 ORTHO05D007428 4.6e-77 292.0 232 60.8
BolC1t05105H Brassica oleracea HOM05D006345 ORTHO05D007428 4.6e-77 292.0 232 60.8
Aa31LG8G650 Aethionema arabicum HOM05D006345 ORTHO05D007428 1.0e-76 290.8 211 65.9
BraA05t22416Z Brassica rapa HOM05D002140 ORTHO05D007428 2.5e-75 286.2 212 64.2
A05p36090 Brassica napus HOM05D002140 ORTHO05D007428 9.5e-75 284.3 212 63.7
Sp3g11640 Schrenkiella parvula HOM05D006345 ORTHO05D007428 9.5e-75 284.3 213 64.8
A01p40130 Brassica napus HOM05D006345 ORTHO05D007428 1.2e-74 283.9 211 62.6
BcaC05g29179 Brassica carinata HOM05D002140 ORTHO05D007428 1.6e-74 283.5 210 64.3
C05p54470 Brassica napus HOM05D002140 ORTHO05D007428 1.6e-74 283.5 210 64.3
BolC5t34114H Brassica oleracea HOM05D002140 ORTHO05D007428 1.6e-74 283.5 210 64.3
SHI16738 Sapria himalayana HOM05D006345 ORTHO05D007428 1.6e-74 283.5 209 66.0
BraA01t04054Z Brassica rapa HOM05D006345 ORTHO05D007428 2.1e-74 283.1 211 62.1
Mapoly0069s0066 Marchantia polymorpha HOM05D006345 ORTHO05D007428 1.4e-73 280.4 240 58.3
BcaB04g21015 Brassica carinata HOM05D006345 ORTHO05D007428 1.8e-73 280.0 211 62.1
Pp3c9_17440 Physcomitrium patens HOM05D006345 ORTHO05D007428 1.4e-70 270.4 247 55.5
CBR_g45447 Chara braunii HOM05D006345 ORTHO05D007428 9.2e-70 267.7 237 55.7
Lsat_1_v5_gn_2_63801 Lactuca sativa HOM05D006345 ORTHO05D007428 3.5e-69 265.8 213 61.0
AagrBONN_evm.TU.Sc2ySwM_117.4015 Anthoceros agrestis HOM05D006345 ORTHO05D007428 8.6e-68 261.2 211 57.3
SMO358G0200 Selaginella moellendorffii HOM05D006345 ORTHO05D007428 4.7e-66 255.4 210 60.0
Solyc12g100070.3 Solanum lycopersicum HOM05D006345 ORTHO05D007428 4.7e-66 255.4 177 66.1
Zm00001eb187530 Zea mays HOM05D006345 ORTHO05D007428 2.6e-64 249.6 200 63.0
Thhalv10009961m.g Eutrema salsugineum HOM05D006345 ORTHO05D007428 3.4e-64 249.2 211 58.3
AUR62002307 Chenopodium quinoa HOM05D006345 ORTHO05D007428 5.8e-64 248.4 212 59.0
SEGI_21458 Sequoiadendron giganteum HOM05D006345 ORTHO05D007428 1.2e-56 224.2 163 69.3
Zm00001eb141630 Zea mays HOM05D006345 ORTHO05D007428 3.8e-47 192.6 144 65.3
Cre01.g036750 Chlamydomonas reinhardtii HOM05D006345 ORTHO05D007428 7.8e-45 184.9 212 47.2
CAN.G1126.44 Capsicum annuum HOM05D006345 ORTHO05D007428 6.2e-42 175.3 159 54.1
Potri.003G157201 Populus trichocarpa HOM05D006345 ORTHO05D007428 5.6e-35 152.1 113 63.7
MCO02G297 Micromonas commoda HOM05D006345 ORTHO05D007428 3.7e-34 149.4 172 47.1
CSS0000171 Camellia sinensis var. sinensis HOM05D006345 ORTHO05D007428 1.5e-32 144.1 101 63.4
Zm00001eb356470 Zea mays HOM05D006345 ORTHO05D007428 2.7e-29 133.3 100 64.0
Sabra03G0114100 Salix brachista HOM05D000029 ORTHO05D000854 2.6e-24 116.7 188 38.8
ATR0006G036 Amborella trichopoda HOM05D006345 ORTHO05D007428 4.8e-10 69.3 47 68.1
Cfa025913 Carpinus fangiana HOM05D006345 ORTHO05D007428 2.2e-07 60.5 222 27.9


User provided reference genes

Program Settings