Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1040 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 2.7e-43 178.3 94 100.0
CDE03G0182 Ceratophyllum demersum HOM05D004208 ORTHO05D005156 6.9e-39 163.7 93 92.5
Manes.12G032400 Manihot esculenta HOM05D004208 ORTHO05D005156 4.9e-21 104.4 93 55.9
TAR636G1466 Trochodendron aralioides HOM05D004208 ORTHO05D005156 4.9e-21 104.4 93 55.9
Prupe.8G223600 Prunus persica HOM05D004208 ORTHO05D005156 1.3e-18 96.3 94 54.3
AUR62030125 Chenopodium quinoa HOM05D004208 ORTHO05D005156 3.0e-18 95.1 96 55.2
AUR62038602 Chenopodium quinoa HOM05D004208 ORTHO05D005156 5.1e-18 94.4 96 55.2
PSO339G3828 Papaver somniferum HOM05D004208 ORTHO05D005156 5.1e-18 94.4 94 54.3
Oeu021968.1 Olea europaea HOM05D004208 ORTHO05D005156 6.7e-18 94.0 95 55.8
Sed0002598 Sechium edule HOM05D004208 ORTHO05D005156 3.3e-17 91.7 93 52.7
Dinv34629 Davidia involucrata HOM05D004208 ORTHO05D005156 4.3e-17 91.3 96 52.1
Sp3g33730 Schrenkiella parvula HOM05D004208 ORTHO05D005156 5.7e-17 90.9 89 51.7
TAR362G0204 Trochodendron aralioides HOM05D004208 ORTHO05D005156 5.7e-17 90.9 93 50.5
Thhalv10001977m.g Eutrema salsugineum HOM05D004208 ORTHO05D005156 7.4e-17 90.5 89 51.7
Actinidia25791 Actinidia chinensis HOM05D004208 ORTHO05D005156 1.3e-16 89.7 98 54.1
Dinv22405 Davidia involucrata HOM05D004208 ORTHO05D005156 1.3e-16 89.7 96 52.1
Aa31LG8G17460 Aethionema arabicum HOM05D004208 ORTHO05D005156 2.8e-16 88.6 93 51.6
MD05G1197100 Malus domestica HOM05D004208 ORTHO05D005156 2.8e-16 88.6 94 52.1
Sopen01g041810 Solanum pennellii HOM05D004208 ORTHO05D005156 3.7e-16 88.2 98 52.0
Carub.0004s1781 Capsella rubella HOM05D004208 ORTHO05D005156 4.8e-16 87.8 93 47.3
Solyc01g098230.3 Solanum lycopersicum HOM05D004208 ORTHO05D005156 4.8e-16 87.8 98 51.0
Sed0003224 Sechium edule HOM05D004208 ORTHO05D005156 8.2e-16 87.0 93 50.5
Actinidia09547 Actinidia chinensis HOM05D004208 ORTHO05D005156 1.1e-15 86.7 98 52.0
Ah.03g147410 Amaranthus hybridus HOM05D004208 ORTHO05D005156 2.4e-15 85.5 101 49.5
CANSAT01G2107 Cannabis sativa HOM05D004208 ORTHO05D005156 2.4e-15 85.5 93 50.5
PGR031G1029 Punica granatum HOM05D004208 ORTHO05D005156 3.1e-15 85.1 94 52.1
Lj2A1151T32 Lonicera japonica HOM05D004208 ORTHO05D005156 4.1e-15 84.7 98 51.0
Actinidia07297 Actinidia chinensis HOM05D004208 ORTHO05D005156 5.3e-15 84.3 92 54.3
Cc01_g18340 Coffea canephora HOM05D004208 ORTHO05D005156 6.9e-15 84.0 97 49.5
CsaV3_5G028820 Cucumis sativus L. HOM05D004208 ORTHO05D005156 6.9e-15 84.0 93 49.5
Nitab4.5_0000245g0150 Nicotiana tabacum HOM05D004208 ORTHO05D005156 6.9e-15 84.0 99 50.5
Nn3g19657 Nelumbo nucifera HOM05D004208 ORTHO05D005156 9.0e-15 83.6 75 52.0
COL.COLO4_05893 Corchorus olitorius HOM05D004208 ORTHO05D005156 1.2e-14 83.2 80 52.5
AT2G36070 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 1.5e-14 82.8 93 46.2
AL4G32160 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 2.0e-14 82.4 93 44.1
CAN.G134.214 Capsicum annuum HOM05D004208 ORTHO05D005156 2.0e-14 82.4 98 46.9
Nitab4.5_0001165g0160 Nicotiana tabacum HOM05D004208 ORTHO05D005156 2.0e-14 82.4 99 50.5
Manes.13G034400 Manihot esculenta HOM05D004208 ORTHO05D005156 2.6e-14 82.0 93 46.2
BcaB07g31584 Brassica carinata HOM05D004208 ORTHO05D005156 4.5e-14 81.3 89 47.2
FAN15G2877 Fragaria x ananassa HOM05D004208 ORTHO05D005156 5.9e-14 80.9 93 45.2
Aqoxy2G03649 Aquilegia oxysepala HOM05D004208 ORTHO05D005156 7.7e-14 80.5 104 46.2
A09p12940 Brassica napus HOM05D004208 ORTHO05D005156 7.7e-14 80.5 89 47.2
CSS0041954 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 7.7e-14 80.5 96 51.0
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 7.7e-14 80.5 93 45.2
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.3e-13 79.7 93 45.2
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.3e-13 79.7 93 45.2
Thecc.01G258100 Theobroma cacao HOM05D004208 ORTHO05D005156 1.3e-13 79.7 80 51.2
Lsat_1_v5_gn_7_79121 Lactuca sativa HOM05D004208 ORTHO05D005156 1.7e-13 79.3 97 48.5
MSTRG.16949 Avicennia marina HOM05D004208 ORTHO05D005156 2.2e-13 79.0 100 47.0
TWI34G1830 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 2.9e-13 78.6 81 48.1
BraA09t36939Z Brassica rapa HOM05D004208 ORTHO05D005156 3.8e-13 78.2 89 44.9
C09p15320 Brassica napus HOM05D004208 ORTHO05D005156 5.0e-13 77.8 89 48.3
AL3G53520 Arabidopsis lyrata HOM05D004208 ORTHO05D005156 6.5e-13 77.4 95 43.2
BcaC04g22784 Brassica carinata HOM05D004208 ORTHO05D005156 6.5e-13 77.4 89 48.3
Gohir.D08G208600 Gossypium hirsutum HOM05D004208 ORTHO05D005156 6.5e-13 77.4 80 50.0
Gorai.004G221000 Gossypium raimondii HOM05D004208 ORTHO05D005156 6.5e-13 77.4 80 50.0
Ah.02g120380 Amaranthus hybridus HOM05D004208 ORTHO05D005156 8.5e-13 77.0 97 46.4
BcaB03g16846 Brassica carinata HOM05D004208 ORTHO05D005156 8.5e-13 77.0 90 48.9
Rhsim01G0263500 Rhododendron simsii HOM05D004208 ORTHO05D005156 8.5e-13 77.0 85 51.8
BolC9t54440H Brassica oleracea HOM05D004208 ORTHO05D005156 1.1e-12 76.6 93 47.3
BcaB08g34912 Brassica carinata HOM05D004208 ORTHO05D005156 1.4e-12 76.3 88 44.3
CSS0038412 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 1.9e-12 75.9 76 55.3
Sc05g0000700 Simmondsia chinensis HOM05D004208 ORTHO05D005156 1.9e-12 75.9 95 48.4
ATR0736G190 Amborella trichopoda HOM05D004208 ORTHO05D005156 2.5e-12 75.5 94 46.8
Cpa.g.sc81.94 Carica papaya HOM05D004208 ORTHO05D005156 2.5e-12 75.5 66 54.5
Migut.N01348 Erythranthe guttata HOM05D004208 ORTHO05D005156 5.5e-12 74.3 102 49.0
Migut.O00608 Erythranthe guttata HOM05D004208 ORTHO05D005156 5.5e-12 74.3 102 49.0
Gohir.A08G190100 Gossypium hirsutum HOM05D004208 ORTHO05D005156 5.5e-12 74.3 80 48.8
SGA_v2.0_scaffold32G13335 Striga asiatica HOM05D004208 ORTHO05D005156 5.5e-12 74.3 97 48.5
THA.LOC104805532 Tarenaya hassleriana HOM05D004208 ORTHO05D005156 5.5e-12 74.3 77 46.8
Rhsim01G0263600 Rhododendron simsii HOM05D004208 ORTHO05D005156 7.2e-12 73.9 96 47.9
Aqoxy5G04369 Aquilegia oxysepala HOM05D004870 ORTHO05D006061 9.4e-12 73.6 93 46.2
CARHR130310 Cardamine hirsuta HOM05D004208 ORTHO05D005156 9.4e-12 73.6 93 44.1
Haze_08822 Corylus avellana HOM05D004208 ORTHO05D005156 1.2e-11 73.2 69 55.1
FAN17G2653 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.2e-11 73.2 93 43.0
Oeu042777.2 Olea europaea HOM05D004208 ORTHO05D005156 1.6e-11 72.8 92 47.8
Cfa012194 Carpinus fangiana HOM05D004208 ORTHO05D005156 2.7e-11 72.0 69 53.6
SalBow1G3185 Salvia bowleyana HOM05D004208 ORTHO05D005156 2.7e-11 72.0 93 43.0
Nitab4.5_0007798g0030 Nicotiana tabacum HOM05D004208 ORTHO05D005156 4.6e-11 71.2 93 44.1
CiPaw.11G131900 Carya illinoinensis HOM05D004208 ORTHO05D005156 6.1e-11 70.9 69 52.2
Ciclev10019992m.g Citrus clementina HOM05D004208 ORTHO05D005156 7.9e-11 70.5 73 53.4
Duzib133G1203 Durio zibethinus HOM05D004208 ORTHO05D005156 7.9e-11 70.5 80 47.5
FvH4_4g12040 Fragaria vesca HOM05D004208 ORTHO05D005156 7.9e-11 70.5 93 41.9
arahy.Tifrunner.gnm1.ann1.M6MGA2 Arachis hypogaea HOM05D004208 ORTHO05D005156 1.0e-10 70.1 80 47.5
Potri.005G224500 Populus trichocarpa HOM05D004208 ORTHO05D005156 1.0e-10 70.1 74 52.7
SEGI_36648 Sequoiadendron giganteum HOM05D004208 ORTHO05D005156 1.4e-10 69.7 94 44.7
Sabra05G0173200 Salix brachista HOM05D004208 ORTHO05D005156 1.8e-10 69.3 95 48.4
Atru.chr5.1689 Acer truncatum HOM05D004208 ORTHO05D005156 3.0e-10 68.6 94 43.6
Eucgr.B01552 Eucalyptus grandis HOM05D004208 ORTHO05D005156 3.0e-10 68.6 114 41.2
Peaxi162Scf00225g00519 Petunia axillaris HOM05D004208 ORTHO05D005156 3.0e-10 68.6 111 40.5
GSVIVG01028335001 Vitis vinifera HOM05D004208 ORTHO05D005156 3.0e-10 68.6 94 41.5
DCAR_005689 Daucus carota HOM05D004208 ORTHO05D005156 5.1e-10 67.8 98 45.9
Potri.002G038300 Populus trichocarpa HOM05D004208 ORTHO05D005156 6.7e-10 67.4 73 49.3
BraA07t27815Z Brassica rapa HOM05D004208 ORTHO05D005156 2.0e-09 65.9 91 40.7
Duzib138G0474 Durio zibethinus HOM05D004208 ORTHO05D005156 2.0e-09 65.9 79 44.3
Hma1.2p1_0273F.1_g109690 Hydrangea macrophylla HOM05D004208 ORTHO05D005156 2.0e-09 65.9 77 44.2
A07p00220 Brassica napus HOM05D004208 ORTHO05D005156 3.3e-09 65.1 93 41.9
FAN12G0345 Fragaria x ananassa HOM05D004208 ORTHO05D005156 4.3e-09 64.7 121 35.5
FAN12G3775 Fragaria x ananassa HOM05D004208 ORTHO05D005156 4.3e-09 64.7 121 35.5
TWI32G0756 Tripterygium wilfordii HOM05D004208 ORTHO05D005156 4.3e-09 64.7 73 46.6
arahy.Tifrunner.gnm1.ann1.W57KUE Arachis hypogaea HOM05D004208 ORTHO05D005156 7.4e-09 63.9 80 45.0
FvH4_2g21470 Fragaria vesca HOM05D004208 ORTHO05D005156 7.4e-09 63.9 93 38.7
Psat7g228960 Pisum sativum HOM05D004208 ORTHO05D005156 1.3e-08 63.2 93 43.0
Zm00001eb111900 Zea mays HOM05D004208 ORTHO05D005156 1.3e-08 63.2 63 60.3
Carub.0003s3496 Capsella rubella HOM05D004208 ORTHO05D005156 1.7e-08 62.8 95 41.1
FAN07G0785 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.7e-08 62.8 124 33.9
Os07g0409700 Oryza sativa ssp. japonica HOM05D004208 ORTHO05D005156 2.2e-08 62.4 67 55.2
BcaC06g36740 Brassica carinata HOM05D004208 ORTHO05D005156 6.3e-08 60.8 75 40.0
AT2G20510 Arabidopsis thaliana HOM05D004208 ORTHO05D005156 1.8e-07 59.3 77 37.7
Oeu062471.2 Olea europaea HOM05D004208 ORTHO05D005156 2.4e-07 58.9 96 40.6
C07p00510 Brassica napus HOM05D004208 ORTHO05D005156 3.1e-07 58.5 76 40.8
BolC7t40497H Brassica oleracea HOM05D004208 ORTHO05D005156 4.1e-07 58.2 77 39.0
EL10Ac7g17258 Beta vulgaris HOM05D004208 ORTHO05D005156 6.9e-07 57.4 94 39.4
Medtr2g083690 Medicago truncatula HOM05D004208 ORTHO05D005156 6.9e-07 57.4 84 41.7
Medtr4g075680 Medicago truncatula HOM05D004208 ORTHO05D005156 6.9e-07 57.4 96 40.6
Lj6g0013651 Lotus japonicus HOM05D004208 ORTHO05D005156 1.2e-06 56.6 81 40.7
MBI10_g22594_MAGBIO Magnolia biondii HOM05D004208 ORTHO05D005156 4.5e-06 54.7 59 45.8
CSS0015888 Camellia sinensis var. sinensis HOM05D004208 ORTHO05D005156 5.9e-06 54.3 66 45.5
Phvul.005G002100 Phaseolus vulgaris HOM05D004208 ORTHO05D005156 5.9e-06 54.3 78 42.3


User provided reference genes

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