Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1037 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 2.3e-68 263.1 255 100.0
CDE06G1380 Ceratophyllum demersum HOM05D007752 ORTHO05D009994 9.3e-22 108.2 148 91.9
Nn2g10299 Nelumbo nucifera HOM05D007752 ORTHO05D009994 1.7e-15 87.4 89 44.9
PSO017G1004 Papaver somniferum HOM05D007752 ORTHO05D009994 2.3e-12 77.0 87 41.4
PSO170G5102 Papaver somniferum HOM05D007752 ORTHO05D009994 2.3e-12 77.0 87 41.4
Zm00001eb016080 Zea mays HOM05D007752 ORTHO05D009994 5.7e-11 72.4 84 39.3
ATR1127G173 Amborella trichopoda HOM05D007752 ORTHO05D009994 4.8e-10 69.3 87 36.8
CiPaw.10G164800 Carya illinoinensis HOM05D007752 ORTHO05D009994 4.8e-10 69.3 84 44.0
Sc20g0006950 Simmondsia chinensis HOM05D007752 ORTHO05D009994 6.3e-10 68.9 84 39.3
CDE04G1576 Ceratophyllum demersum HOM05D030490 ORTHO05D026338 1.4e-09 67.8 32 100.0
Potri.016G136700 Populus trichocarpa HOM05D007752 ORTHO05D009994 2.4e-09 67.0 79 40.5
Sabra04G0153400 Salix brachista HOM05D007752 ORTHO05D009994 1.5e-08 64.3 73 41.1
CSS0000350 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 2.6e-08 63.5 87 35.6
Os03g0336000 Oryza sativa ssp. japonica HOM05D007752 ORTHO05D009994 4.5e-08 62.8 80 36.2
CSS0006720 Camellia sinensis var. sinensis HOM05D007752 ORTHO05D009994 1.0e-07 61.6 87 35.6
Ca_07763_v3 Cicer arietinum L. HOM05D007752 ORTHO05D009994 1.0e-07 61.6 80 36.2
RcHm_v2.0_Chr3g0460471 Rosa chinensis HOM05D007752 ORTHO05D009994 2.2e-07 60.5 74 40.5
VMungo1383G3403 Vigna mungo HOM05D007752 ORTHO05D009994 2.9e-07 60.1 84 38.1
MBI03_g22789_MAGBIO Magnolia biondii HOM05D007752 ORTHO05D009994 8.4e-07 58.5 62 46.8
AUR62029765 Chenopodium quinoa HOM05D007752 ORTHO05D009994 1.1e-06 58.2 75 37.3
Eucgr.A00738 Eucalyptus grandis HOM05D007752 ORTHO05D009994 1.1e-06 58.2 87 34.5
Cpa.g.sc86.57 Carica papaya HOM05D007752 ORTHO05D009994 1.4e-06 57.8 88 34.1
MELO3C009103.2 Cucumis melo HOM05D007752 ORTHO05D009994 4.2e-06 56.2 84 38.1
FvH4_6g09870 Fragaria vesca HOM05D007752 ORTHO05D009994 4.2e-06 56.2 74 39.2
QL07p032115 Quercus lobata HOM05D007752 ORTHO05D009994 4.2e-06 56.2 67 40.3
FAN14G1029 Fragaria x ananassa HOM05D007752 ORTHO05D009994 5.5e-06 55.8 73 39.7
COL.COLO4_06481 Corchorus olitorius HOM05D007752 ORTHO05D000248 7.2e-06 55.5 89 29.2
Glyma.09G274800 Glycine max HOM05D007752 ORTHO05D009994 7.2e-06 55.5 86 36.0
TAR633G0335 Trochodendron aralioides HOM05D007752 ORTHO05D009994 7.2e-06 55.5 60 45.0


User provided reference genes

Program Settings