Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1030 Ceratophyllum demersum HOM05D005851 ORTHO05D007137 1.9e-99 365.9 192 100.0
vmacro00216 Vaccinium macrocarpon HOM05D005851 ORTHO05D007137 3.1e-54 215.7 175 65.7
Actinidia14484 Actinidia chinensis HOM05D005851 ORTHO05D007137 1.5e-53 213.4 151 70.9
Hma1.2p1_0367F.1_g137205 Hydrangea macrophylla HOM05D005851 ORTHO05D007137 2.9e-52 209.1 144 72.9
TAR629G1703 Trochodendron aralioides HOM05D005851 ORTHO05D007137 2.9e-52 209.1 189 61.9
CSS0019536 Camellia sinensis var. sinensis HOM05D005851 ORTHO05D007137 2.5e-51 206.1 157 69.4
AUR62010535 Chenopodium quinoa HOM05D005851 ORTHO05D007137 5.5e-51 204.9 181 61.3
Sc01g0009080 Simmondsia chinensis HOM05D005851 ORTHO05D007137 7.2e-51 204.5 188 62.8
MBI12_g34479_MAGBIO Magnolia biondii HOM05D005851 ORTHO05D007137 2.1e-50 203.0 183 61.7
HanXRQChr09g0246661 Helianthus annuus HOM05D005851 ORTHO05D007137 7.9e-50 201.1 144 72.2
QL12p015621 Quercus lobata HOM05D005851 ORTHO05D007137 7.9e-50 201.1 143 73.4
FAN13G0774 Fragaria x ananassa HOM05D005851 ORTHO05D007137 1.0e-49 200.7 137 74.5
RcHm_v2.0_Chr7g0200451 Rosa chinensis HOM05D005851 ORTHO05D007137 1.0e-49 200.7 172 64.0
Cpa.g.sc29.62 Carica papaya HOM05D005851 ORTHO05D007137 1.4e-49 200.3 170 65.9
FvH4_5g00940 Fragaria vesca HOM05D005851 ORTHO05D007137 2.3e-49 199.5 137 73.7
AUR62017360 Chenopodium quinoa HOM05D005851 ORTHO05D007137 3.9e-49 198.7 181 59.7
FAN04G1422 Fragaria x ananassa HOM05D005851 ORTHO05D007137 3.9e-49 198.7 137 73.7
Atru.chr9.1473 Acer truncatum HOM05D005851 ORTHO05D007137 6.7e-49 198.0 140 74.3
CsaV3_3G003320 Cucumis sativus L. HOM05D005851 ORTHO05D007137 1.1e-48 197.2 184 62.0
Solyc08g079680.3 Solanum lycopersicum HOM05D005851 ORTHO05D007137 2.0e-48 196.4 152 65.8
EL10Ac5g12653 Beta vulgaris HOM05D005851 ORTHO05D007137 2.6e-48 196.1 193 57.5
ECA233G5981 Erigeron canadensis HOM05D005851 ORTHO05D007137 3.3e-48 195.7 137 71.5
Rhsim05G0172500 Rhododendron simsii HOM05D005851 ORTHO05D007137 4.4e-48 195.3 203 56.2
Sopen08g028040 Solanum pennellii HOM05D005851 ORTHO05D007137 4.4e-48 195.3 152 65.1
GSVIVG01019923001 Vitis vinifera HOM05D005851 ORTHO05D007137 4.4e-48 195.3 135 73.3
Cc08_g13500 Coffea canephora HOM05D005851 ORTHO05D007137 5.7e-48 194.9 197 59.9
PGSC0003DMG400003949 Solanum tuberosum HOM05D005851 ORTHO05D007137 5.7e-48 194.9 152 65.1
Nitab4.5_0006122g0020 Nicotiana tabacum HOM05D005851 ORTHO05D007137 7.4e-48 194.5 159 64.2
CAN.G630.46 Capsicum annuum HOM05D005851 ORTHO05D007137 9.7e-48 194.1 115 80.0
Oeu064711.1 Olea europaea HOM05D005851 ORTHO05D007137 1.3e-47 193.7 150 69.3
Nitab4.5_0000439g0090 Nicotiana tabacum HOM05D005851 ORTHO05D007137 3.7e-47 192.2 166 60.8
Peaxi162Scf00620g00019 Petunia axillaris HOM05D005851 ORTHO05D007137 3.7e-47 192.2 147 66.7
TPR.G19565 Trifolium pratense HOM05D005851 ORTHO05D007137 8.2e-47 191.0 171 60.2
AT4G22830 Arabidopsis thaliana HOM05D005851 ORTHO05D007137 1.1e-46 190.7 186 56.5
Psat2g180400 Pisum sativum HOM05D005851 ORTHO05D007137 1.1e-46 190.7 108 81.5
Sabra01G0087800 Salix brachista HOM05D005851 ORTHO05D007137 1.1e-46 190.7 135 73.3
TWI60G0484 Tripterygium wilfordii HOM05D005851 ORTHO05D007137 1.1e-46 190.7 177 61.0
arahy.Tifrunner.gnm1.ann1.BUTP6K Arachis hypogaea HOM05D005851 ORTHO05D007137 1.4e-46 190.3 132 72.7
PGR042G2385 Punica granatum HOM05D005851 ORTHO05D007137 1.4e-46 190.3 161 62.1
Gohir.D12G225000 Gossypium hirsutum HOM05D005851 ORTHO05D007137 2.4e-46 189.5 183 61.7
Gorai.008G241100 Gossypium raimondii HOM05D005851 ORTHO05D007137 2.4e-46 189.5 183 61.7
MELO3C013999.2 Cucumis melo HOM05D005851 ORTHO05D007137 3.1e-46 189.1 192 59.4
Gohir.A12G222500 Gossypium hirsutum HOM05D005851 ORTHO05D007137 3.1e-46 189.1 183 61.2
Nitab4.5_0001816g0070 Nicotiana tabacum HOM05D005851 ORTHO05D007137 4.1e-46 188.7 159 62.9
arahy.Tifrunner.gnm1.ann1.KEJN3W Arachis hypogaea HOM05D005851 ORTHO05D007137 5.3e-46 188.3 132 71.2
MD06G1068000 Malus domestica HOM05D005851 ORTHO05D007137 5.3e-46 188.3 168 61.3
Lj2g0003035 Lotus japonicus HOM05D005851 ORTHO05D007137 7.0e-46 188.0 105 81.9
Potri.001G114800 Populus trichocarpa HOM05D005851 ORTHO05D007137 7.0e-46 188.0 161 64.0
Medtr5g011460 Medicago truncatula HOM05D005851 ORTHO05D007137 9.1e-46 187.6 168 61.3
Ciclev10024430m.g Citrus clementina HOM05D005851 ORTHO05D007137 1.2e-45 187.2 137 70.8
Aa31LG6G4910 Aethionema arabicum HOM05D000943 ORTHO05D002475 1.5e-45 186.8 143 67.1
ATR0810G218 Amborella trichopoda HOM05D005851 ORTHO05D007137 1.5e-45 186.8 140 70.0
Thhalv10026321m.g Eutrema salsugineum HOM05D005851 ORTHO05D007137 1.5e-45 186.8 189 57.1
Glyma.01G213300 Glycine max HOM05D005851 ORTHO05D007137 1.5e-45 186.8 159 62.3
Duzib205G1229 Durio zibethinus HOM05D005851 ORTHO05D007137 3.4e-45 185.7 181 60.8
Phvul.002G151800 Phaseolus vulgaris HOM05D005851 ORTHO05D007137 3.4e-45 185.7 161 64.0
SalBow1G3546 Salvia bowleyana HOM05D005851 ORTHO05D007137 5.9e-45 184.9 183 56.3
Os04g0379400 Oryza sativa ssp. japonica HOM05D005851 ORTHO05D007137 7.7e-45 184.5 139 67.6
Carub.0007s1844 Capsella rubella HOM05D005851 ORTHO05D007137 1.0e-44 184.1 189 55.6
CARHR229860 Cardamine hirsuta HOM05D005851 ORTHO05D007137 1.0e-44 184.1 195 55.9
Nitab4.5_0001265g0130 Nicotiana tabacum HOM05D005851 ORTHO05D007137 1.3e-44 183.7 159 61.0
SGA_v2.0_scaffold144G35989 Striga asiatica HOM05D005851 ORTHO05D007137 1.3e-44 183.7 167 62.3
HPP92_025677 Vanilla planifolia HOM05D005851 ORTHO05D007137 3.8e-44 182.2 105 81.9
AL7G30690 Arabidopsis lyrata HOM05D005851 ORTHO05D007137 5.0e-44 181.8 192 56.2
CAN.G1394.24 Capsicum annuum HOM05D005851 ORTHO05D007137 6.5e-44 181.4 140 65.7
Zm00001eb103020 Zea mays HOM05D005851 ORTHO05D007137 6.5e-44 181.4 109 78.9
BcaNung01022 Brassica carinata HOM05D005851 ORTHO05D007137 8.5e-44 181.0 142 65.5
A01p14080 Brassica napus HOM05D005851 ORTHO05D007137 8.5e-44 181.0 204 52.9
BraA01t01356Z Brassica rapa HOM05D005851 ORTHO05D007137 8.5e-44 181.0 204 52.9
CiPaw.11G145200 Carya illinoinensis HOM05D005851 ORTHO05D007137 8.5e-44 181.0 145 67.6
BcaC09g51070 Brassica carinata HOM05D005851 ORTHO05D007137 1.4e-43 180.3 191 54.5
BcaC09g51071 Brassica carinata HOM05D005851 ORTHO05D007137 1.4e-43 180.3 191 54.5
C01p17300 Brassica napus HOM05D005851 ORTHO05D007137 1.4e-43 180.3 191 54.5
THA.LOC104814025 Tarenaya hassleriana HOM05D005851 ORTHO05D007137 1.9e-43 179.9 192 53.6
BolC1t01669H Brassica oleracea HOM05D005851 ORTHO05D007137 4.2e-43 178.7 191 53.9
Lalb_Chr16g0379871 Lupinus albus HOM05D005851 ORTHO05D007137 7.2e-43 177.9 98 84.7
Sopen08g003540 Solanum pennellii HOM05D005851 ORTHO05D007137 7.2e-43 177.9 105 78.1
PGSC0003DMG400012515 Solanum tuberosum HOM05D005851 ORTHO05D007137 7.2e-43 177.9 145 64.1
FAN08G3582 Fragaria x ananassa HOM05D005851 ORTHO05D007137 9.4e-43 177.6 137 67.2
Solyc08g007580.4 Solanum lycopersicum HOM05D005851 ORTHO05D007137 9.4e-43 177.6 143 62.9
MSTRG.1924 Avicennia marina HOM05D005851 ORTHO05D007137 6.1e-42 174.9 101 79.2
Pp3c12_9510 Physcomitrium patens HOM05D005851 ORTHO05D007137 1.8e-41 173.3 144 62.5
Pp3c10_11850 Physcomitrium patens HOM05D005851 ORTHO05D007137 6.7e-41 171.4 134 65.7
Ah.02g116130 Amaranthus hybridus HOM05D005851 ORTHO05D007137 2.6e-40 169.5 99 77.8
Glyma.11G028600 Glycine max HOM05D005851 ORTHO05D007137 2.2e-39 166.4 164 56.1
SMO364G0744 Selaginella moellendorffii HOM05D005851 ORTHO05D007137 4.8e-39 165.2 121 63.6
Mapoly0066s0013 Marchantia polymorpha HOM05D005851 ORTHO05D007137 2.4e-38 162.9 104 72.1
Sed0022049 Sechium edule HOM05D005851 ORTHO05D007137 3.1e-38 162.5 143 64.3
CANSAT95G0001 Cannabis sativa HOM05D005851 ORTHO05D007137 2.0e-37 159.8 169 55.0
Cre12.g555400 Chlamydomonas reinhardtii HOM05D005851 ORTHO05D007137 1.0e-36 157.5 115 65.2
Manes.02G031801 Manihot esculenta HOM05D005851 ORTHO05D007137 8.0e-34 147.9 172 51.7
DCAR_000876 Daucus carota HOM05D005851 ORTHO05D007137 1.8e-33 146.7 113 66.4
Migut.E01010 Erythranthe guttata HOM05D005851 ORTHO05D007137 2.3e-33 146.4 119 63.9
COL.COLO4_23838 Corchorus olitorius HOM05D005851 ORTHO05D007137 4.0e-33 145.6 75 92.0
Nn1g01189 Nelumbo nucifera HOM05D005851 ORTHO05D007137 2.8e-31 139.4 196 49.0
FAN18G0436 Fragaria x ananassa HOM05D005851 ORTHO05D007137 1.1e-30 137.5 137 57.7
SEGI_29987 Sequoiadendron giganteum HOM05D005851 ORTHO05D007137 1.4e-30 137.1 77 77.9
VMungo1215G2211 Vigna mungo HOM05D005851 ORTHO05D007137 1.4e-30 137.1 83 75.9
PRCOL_00005435 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 3.8e-28 129.0 132 48.5
MCO03G553 Micromonas commoda HOM05D005851 ORTHO05D007137 6.5e-28 128.3 94 61.7
MCO14G091 Micromonas commoda HOM05D005851 ORTHO05D007137 5.2e-25 118.6 105 49.5
Hund14676 Selenicereus undatus HOM05D005851 ORTHO05D007137 5.7e-24 115.2 136 50.7
PRCOL_00002729 Prasinoderma coloniale HOM05D005851 ORTHO05D007137 2.8e-23 112.8 128 46.9
Thecc.03G264400 Theobroma cacao HOM05D005851 ORTHO05D007137 4.8e-23 112.1 139 52.5
Lsat_1_v5_gn_6_10241 Lactuca sativa HOM05D005851 ORTHO05D007137 1.1e-22 110.9 84 67.9
MCO14G294 Micromonas commoda HOM05D005851 ORTHO05D007137 5.4e-22 108.6 95 51.6
PSO782G0540 Papaver somniferum HOM05D005851 ORTHO05D007137 1.2e-21 107.5 124 50.8
ClCG00G000050 Citrullus lanatus HOM05D005851 ORTHO05D007137 1.3e-20 104.0 130 51.5
ClCG00G005270 Citrullus lanatus HOM05D005851 ORTHO05D007137 1.3e-20 104.0 130 51.5
ClCG10G003300 Citrullus lanatus HOM05D005851 ORTHO05D007137 1.3e-20 104.0 130 51.5
MD04G1076900 Malus domestica HOM05D005851 ORTHO05D007137 2.9e-20 102.8 58 82.8
ClCG00G004660 Citrullus lanatus HOM05D005851 ORTHO05D007137 3.8e-20 102.4 129 50.4
Ca_06681_v3 Cicer arietinum L. HOM05D000943 ORTHO05D002475 4.2e-19 99.0 95 51.6
Dinv39057 Davidia involucrata HOM05D005851 ORTHO05D007137 5.5e-19 98.6 55 85.5
Lj2A204T50 Lonicera japonica HOM05D005851 ORTHO05D007137 2.8e-18 96.3 49 83.7
Eucgr.E00492 Eucalyptus grandis HOM05D005851 ORTHO05D007137 3.6e-18 95.9 71 69.0
unitig_699.g19746 Utricularia gibba HOM05D002021 ORTHO05D002077 3.0e-17 92.8 68 67.6
Nn4g26436 Nelumbo nucifera HOM05D005851 ORTHO05D007137 5.2e-17 92.0 84 59.5
PRCOL_00002728 Prasinoderma coloniale HOM05D005851 ORTHO05D049091 1.2e-13 80.9 135 34.8
CBR_g50783 Chara braunii HOM05D000019 ORTHO05D000002 2.0e-13 80.1 53 66.0
BolC3t15330H Brassica oleracea HOM05D005851 ORTHO05D007137 6.1e-10 68.6 41 75.6
Lj2C204G6 Lonicera japonica HOM05D005851 ORTHO05D007137 1.2e-08 64.3 90 46.7
Aqoxy5G03942 Aquilegia oxysepala HOM05D001344 ORTHO05D002590 4.4e-08 62.4 63 57.1
COL.COLO4_23837 Corchorus olitorius HOM05D005851 ORTHO05D007137 5.8e-08 62.0 109 46.8
arahy.Tifrunner.gnm1.ann1.UAJL6I Arachis hypogaea HOM05D005851 ORTHO05D007137 3.7e-07 59.3 70 51.4
Dinv39056 Davidia involucrata HOM05D005851 ORTHO05D007137 1.1e-06 57.8 128 38.3
BcaC09g48268 Brassica carinata HOM05D002423 ORTHO05D007137 7.0e-06 55.1 76 50.0
C01p52310 Brassica napus HOM05D002423 ORTHO05D007137 7.0e-06 55.1 76 50.0
Aa31LG6G4700 Aethionema arabicum HOM05D000943 ORTHO05D002475 9.2e-06 54.7 40 70.0


User provided reference genes

Program Settings