Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1022 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 3.3e-150 535.4 355 100.0
CDE07G0561 Ceratophyllum demersum HOM05D006571 ORTHO05D007771 4.0e-124 448.7 447 67.3
TAR376G1222 Trochodendron aralioides HOM05D006571 ORTHO05D007771 3.9e-87 325.9 256 74.2
MBI16_g37746_MAGBIO Magnolia biondii HOM05D006571 ORTHO05D007771 6.3e-85 318.5 253 73.9
Gohir.D03G015600 Gossypium hirsutum HOM05D006571 ORTHO05D007771 1.4e-84 317.4 243 76.1
Gorai.003G015800 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.4e-84 317.4 243 76.1
Solyc03g034080.4 Solanum lycopersicum HOM05D006571 ORTHO05D007771 3.1e-84 316.2 249 72.7
Psat4g091960 Pisum sativum HOM05D006571 ORTHO05D007771 1.6e-83 313.9 256 76.2
Gohir.A02G164500 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.0e-83 313.5 243 75.7
Sopen03g006860 Solanum pennellii HOM05D006571 ORTHO05D007771 2.5e-81 306.6 249 71.1
SalBow5G2751 Salvia bowleyana HOM05D006571 ORTHO05D007771 1.2e-80 304.3 253 71.9
Duzib147G0515 Durio zibethinus HOM05D006571 ORTHO05D007771 1.4e-79 300.8 206 81.6
Migut.L00283 Erythranthe guttata HOM05D006571 ORTHO05D007771 1.4e-79 300.8 243 73.7
MD15G1265000 Malus domestica HOM05D006571 ORTHO05D007771 1.4e-79 300.8 206 83.0
Nitab4.5_0001466g0040 Nicotiana tabacum HOM05D006571 ORTHO05D007771 1.4e-79 300.8 254 68.9
Ca_22257_v3 Cicer arietinum L. HOM05D006571 ORTHO05D007771 1.8e-79 300.4 267 69.7
PGSC0003DMG400017777 Solanum tuberosum HOM05D006571 ORTHO05D007771 1.8e-79 300.4 250 69.6
Hma1.2p1_0400F.1_g144570 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 4.0e-79 299.3 253 70.8
Thecc.01G037900 Theobroma cacao HOM05D006571 ORTHO05D007771 4.0e-79 299.3 240 72.5
Oeu023993.1 Olea europaea HOM05D006571 ORTHO05D007771 2.0e-78 297.0 261 70.1
Oeu044138.1 Olea europaea HOM05D006571 ORTHO05D007771 2.0e-78 297.0 258 67.8
COL.COLO4_22100 Corchorus olitorius HOM05D006571 ORTHO05D007771 2.6e-78 296.6 209 81.8
Phvul.003G252700 Phaseolus vulgaris HOM05D006571 ORTHO05D007771 2.6e-78 296.6 264 68.2
Cc07_g09340 Coffea canephora HOM05D006571 ORTHO05D007771 3.4e-78 296.2 243 74.1
MD02G1150500 Malus domestica HOM05D006571 ORTHO05D007771 3.4e-78 296.2 249 70.7
Manes.02G092300 Manihot esculenta HOM05D006571 ORTHO05D007771 3.4e-78 296.2 206 78.6
GSVIVG01018984001 Vitis vinifera HOM05D006571 ORTHO05D007771 3.4e-78 296.2 358 64.2
arahy.Tifrunner.gnm1.ann1.J8IV3X Arachis hypogaea HOM05D006571 ORTHO05D007771 4.4e-78 295.8 256 70.7
arahy.Tifrunner.gnm1.ann1.P9WABM Arachis hypogaea HOM05D006571 ORTHO05D007771 4.4e-78 295.8 256 70.7
RcHm_v2.0_Chr2g0101911 Rosa chinensis HOM05D006571 ORTHO05D007771 4.4e-78 295.8 253 71.1
Duzib187G0259 Durio zibethinus HOM05D006571 ORTHO05D007771 5.7e-78 295.4 206 82.0
Haze_15108 Corylus avellana HOM05D006571 ORTHO05D007771 7.5e-78 295.0 242 74.0
FvH4_1g13531 Fragaria vesca HOM05D006571 ORTHO05D007771 7.5e-78 295.0 206 83.0
FAN26G3136 Fragaria x ananassa HOM05D006571 ORTHO05D007771 7.5e-78 295.0 206 83.0
Sabra05G0102400 Salix brachista HOM05D006571 ORTHO05D007771 7.5e-78 295.0 315 64.4
Sc03g0000790 Simmondsia chinensis HOM05D006571 ORTHO05D007771 7.5e-78 295.0 261 69.7
FAN23G2572 Fragaria x ananassa HOM05D006571 ORTHO05D007771 1.7e-77 293.9 206 83.5
VMungo0251G2973 Vigna mungo HOM05D006571 ORTHO05D007771 1.7e-77 293.9 255 70.2
ATR0733G171 Amborella trichopoda HOM05D006571 ORTHO05D007771 2.8e-77 293.1 208 79.8
Prupe.7G152600 Prunus persica HOM05D006571 ORTHO05D007771 3.7e-77 292.7 252 71.0
Sabra07G0024000 Salix brachista HOM05D006571 ORTHO05D007771 6.3e-77 292.0 257 68.5
CiPaw.01G036100 Carya illinoinensis HOM05D006571 ORTHO05D007771 8.3e-77 291.6 207 80.7
Gorai.007G204400 Gossypium raimondii HOM05D006571 ORTHO05D007771 1.1e-76 291.2 211 80.6
CiPaw.02G016100 Carya illinoinensis HOM05D006571 ORTHO05D007771 1.4e-76 290.8 207 80.2
TWI53G0501 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.4e-76 290.8 254 68.1
TWI09G0338 Tripterygium wilfordii HOM05D006571 ORTHO05D007771 1.8e-76 290.4 265 69.1
QL06p045652 Quercus lobata HOM05D006571 ORTHO05D007771 2.4e-76 290.0 243 74.5
TPR.G34976 Trifolium pratense HOM05D006571 ORTHO05D007771 2.4e-76 290.0 251 72.5
Lalb_Chr09g0322511 Lupinus albus HOM05D006571 ORTHO05D007771 4.1e-76 289.3 243 72.8
Lalb_Chr16g0377891 Lupinus albus HOM05D006571 ORTHO05D007771 4.1e-76 289.3 254 70.1
CANSAT01G0415 Cannabis sativa HOM05D006571 ORTHO05D007771 5.3e-76 288.9 251 70.9
Lj2P450T8 Lonicera japonica HOM05D006571 ORTHO05D007771 5.3e-76 288.9 197 82.7
HanXRQChr16g0530131 Helianthus annuus HOM05D006571 ORTHO05D007771 9.1e-76 288.1 251 71.7
Lj4g0016878 Lotus japonicus HOM05D006571 ORTHO05D007771 9.1e-76 288.1 255 71.4
Hund14147 Selenicereus undatus HOM05D006571 ORTHO05D007771 9.1e-76 288.1 245 72.2
Glyma.16G140800 Glycine max HOM05D006571 ORTHO05D007771 1.2e-75 287.7 270 67.0
Duzib264G0679 Durio zibethinus HOM05D006571 ORTHO05D007771 1.6e-75 287.3 206 80.6
Gohir.D11G191700 Gossypium hirsutum HOM05D006571 ORTHO05D007771 2.0e-75 287.0 245 71.0
Gohir.A11G185200 Gossypium hirsutum HOM05D006571 ORTHO05D007771 3.5e-75 286.2 209 80.9
Medtr8g077860 Medicago truncatula HOM05D006571 ORTHO05D007771 4.5e-75 285.8 272 67.6
Oeu024877.2 Olea europaea HOM05D006571 ORTHO05D007771 4.5e-75 285.8 262 65.6
PGR102G1801 Punica granatum HOM05D006571 ORTHO05D007771 7.7e-75 285.0 260 67.7
CAN.G1028.5 Capsicum annuum HOM05D006571 ORTHO05D007771 1.0e-74 284.6 242 69.0
ECA246G1775 Erigeron canadensis HOM05D006571 ORTHO05D007771 1.0e-74 284.6 264 67.8
Nn1g05052 Nelumbo nucifera HOM05D006571 ORTHO05D007771 1.0e-74 284.6 208 79.8
THA.LOC104807447 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 2.2e-74 283.5 257 68.9
Glyma.02G057800 Glycine max HOM05D006571 ORTHO05D007771 5.0e-74 282.3 267 67.4
Atru.chr3.554 Acer truncatum HOM05D006571 ORTHO05D007771 6.5e-74 282.0 209 78.9
Aqoxy6G01074 Aquilegia oxysepala HOM05D006571 ORTHO05D007771 6.5e-74 282.0 252 66.3
Hma1.2p1_0066F.1_g036610 Hydrangea macrophylla HOM05D006571 ORTHO05D007771 6.5e-74 282.0 252 66.7
CSS0027902 Camellia sinensis var. sinensis HOM05D006571 ORTHO05D007771 1.9e-73 280.4 259 66.0
AL5G30850 Arabidopsis lyrata HOM05D006571 ORTHO05D007771 5.5e-73 278.9 272 65.1
Manes.01G133900 Manihot esculenta HOM05D006571 ORTHO05D007771 7.2e-73 278.5 257 67.7
Actinidia12116 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.2e-72 277.7 206 79.1
Potri.005G124700 Populus trichocarpa HOM05D006571 ORTHO05D007771 1.6e-72 277.3 258 67.4
Peaxi162Scf00751g00044 Petunia axillaris HOM05D006571 ORTHO05D007771 2.1e-72 276.9 211 73.9
Actinidia36549 Actinidia chinensis HOM05D006571 ORTHO05D007771 1.8e-71 273.9 206 76.7
Carub.0005s1702 Capsella rubella HOM05D006571 ORTHO05D007771 1.8e-71 273.9 271 64.2
Dinv26822 Davidia involucrata HOM05D006571 ORTHO05D007771 1.8e-71 273.9 252 68.7
CARHR160190 Cardamine hirsuta HOM05D006571 ORTHO05D007771 5.2e-71 272.3 272 63.6
SGA_v2.0_scaffold402G50988 Striga asiatica HOM05D006571 ORTHO05D007771 6.8e-71 271.9 270 61.1
Aa31LG4G18850 Aethionema arabicum HOM05D006571 ORTHO05D007771 8.8e-71 271.6 265 64.5
EL10Ac6g14930 Beta vulgaris HOM05D006571 ORTHO05D007771 9.8e-70 268.1 161 82.0
AUR62003170 Chenopodium quinoa HOM05D006571 ORTHO05D007771 1.3e-69 267.7 161 81.4
AT3G50690 Arabidopsis thaliana HOM05D006571 ORTHO05D007771 2.8e-69 266.5 267 63.7
GSVIVG01031937001 Vitis vinifera HOM05D006571 ORTHO05D007771 8.3e-69 265.0 160 81.2
TAR628G0135 Trochodendron aralioides HOM05D006571 ORTHO05D007771 1.1e-68 264.6 147 89.8
Potri.007G027500 Populus trichocarpa HOM05D006571 ORTHO05D007771 2.4e-68 263.5 162 80.9
Thhalv10025306m.g Eutrema salsugineum HOM05D006571 ORTHO05D007771 1.5e-65 254.2 222 69.4
PSO170G0995 Papaver somniferum HOM05D006571 ORTHO05D007771 2.3e-63 246.9 227 66.5
Zm00001eb327200 Zea mays HOM05D006571 ORTHO05D007771 6.8e-63 245.4 273 61.9
BcaNung04428 Brassica carinata HOM05D006571 ORTHO05D007771 8.9e-63 245.0 160 75.6
BcaNung00714 Brassica carinata HOM05D006571 ORTHO05D007771 1.5e-62 244.2 160 74.4
C01p02460 Brassica napus HOM05D006571 ORTHO05D007771 1.5e-62 244.2 160 74.4
BolC1t00234H Brassica oleracea HOM05D006571 ORTHO05D007771 1.5e-62 244.2 160 74.4
PSO764G0269 Papaver somniferum HOM05D006571 ORTHO05D007771 2.6e-62 243.4 226 65.9
BraA01t00212Z Brassica rapa HOM05D006571 ORTHO05D007771 1.3e-61 241.1 160 73.8
A01p02240 Brassica napus HOM05D006571 ORTHO05D007771 6.3e-61 238.8 160 73.1
THA.LOC104804229 Tarenaya hassleriana HOM05D006571 ORTHO05D007771 5.4e-60 235.7 159 73.0
Mapoly0013s0183 Marchantia polymorpha HOM05D006571 ORTHO05D007771 3.3e-57 226.5 161 72.0
Lj9A368T57 Lonicera japonica HOM05D006571 ORTHO05D007771 1.4e-55 221.1 201 59.2
SMO144G0154 Selaginella moellendorffii HOM05D006571 ORTHO05D007771 4.0e-55 219.5 161 68.3
Pp3c2_24900 Physcomitrium patens HOM05D006571 ORTHO05D007771 4.0e-47 193.0 160 62.5
Pp3c2_24950 Physcomitrium patens HOM05D006571 ORTHO05D007771 4.0e-47 193.0 160 62.5
Pp3c1_12220 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.2e-45 187.2 162 61.1
Pp3c1_12230 Physcomitrium patens HOM05D006571 ORTHO05D007771 2.2e-45 187.2 162 61.1
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 8.3e-45 185.3 154 72.1
SEGI_17530 Sequoiadendron giganteum HOM05D006571 ORTHO05D007771 1.8e-39 167.5 152 61.2
Zm00001eb217610 Zea mays HOM05D006571 ORTHO05D007771 4.0e-31 139.8 222 45.0
Zm00001eb052260 Zea mays HOM05D006571 ORTHO05D007771 6.0e-27 125.9 163 46.6
Os03g0668900 Oryza sativa ssp. japonica HOM05D006571 ORTHO05D007771 4.8e-24 116.3 161 42.2
Cre08.g363700 Chlamydomonas reinhardtii HOM05D006571 ORTHO05D007771 4.0e-23 113.2 159 44.0
Zm00001eb205800 Zea mays HOM05D006571 ORTHO05D007771 2.8e-16 90.5 139 40.3
Oeu000712.1 Olea europaea HOM05D006571 ORTHO05D007771 9.0e-15 85.5 58 70.7
MCO02G270 Micromonas commoda HOM05D006571 ORTHO05D007771 7.1e-12 75.9 157 34.4
Zm00001eb386610 Zea mays HOM05D006571 ORTHO05D007771 2.1e-11 74.3 95 49.5
TAR628G0345 Trochodendron aralioides HOM05D006571 ORTHO05D007771 8.7e-10 68.9 109 57.8
Cre16.g679600 Chlamydomonas reinhardtii HOM05D005498 ORTHO05D006719 3.1e-07 60.5 110 35.5
HPP92_023605 Vanilla planifolia HOM05D006571 ORTHO05D007771 4.0e-07 60.1 113 54.9
Zm00001eb426950 Zea mays HOM05D022938 ORTHO05D007771 4.0e-07 60.1 82 43.9
TWI36G1055 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 3.4e-06 57.0 110 34.5
TWI75G0967 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 5.8e-06 56.2 110 33.6
TWI75G1441 Tripterygium wilfordii HOM05D005498 ORTHO05D006719 5.8e-06 56.2 110 33.6
HanXRQChr05g0154501 Helianthus annuus HOM05D005498 ORTHO05D006719 1.0e-05 55.5 110 32.7
HanXRQChr06g0174511 Helianthus annuus HOM05D005498 ORTHO05D006719 1.0e-05 55.5 110 32.7


User provided reference genes

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