Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G1020 Ceratophyllum demersum HOM05D003458 ORTHO05D003854 2.0e-85 318.9 149 100.0
CDE04G0124 Ceratophyllum demersum HOM05D003458 ORTHO05D003854 2.7e-29 132.5 65 90.8
CDE02G3149 Ceratophyllum demersum HOM05D003458 ORTHO05D003854 2.5e-27 125.9 65 84.6
ATR0580G394 Amborella trichopoda HOM05D003458 ORTHO05D003854 9.3e-14 80.9 69 52.2
MBI14_g09104_MAGBIO Magnolia biondii HOM05D003458 ORTHO05D003854 9.3e-14 80.9 75 53.3
Aqoxy7G03379 Aquilegia oxysepala HOM05D003458 ORTHO05D003854 2.7e-13 79.3 74 52.7
MBI15_g18233_MAGBIO Magnolia biondii HOM05D003458 ORTHO05D003854 3.5e-13 79.0 75 54.7
TAR383G0585 Trochodendron aralioides HOM05D003458 ORTHO05D003854 3.5e-13 79.0 74 54.1
MSTRG.11188 Avicennia marina HOM05D003458 ORTHO05D003854 7.9e-13 77.8 71 53.5
Cc04_g05210 Coffea canephora HOM05D003458 ORTHO05D003854 1.0e-12 77.4 71 56.3
Haze_16677 Corylus avellana HOM05D003458 ORTHO05D003854 1.0e-12 77.4 72 52.8
Dinv21418 Davidia involucrata HOM05D003458 ORTHO05D003854 1.8e-12 76.6 74 54.1
FAN05G3986 Fragaria x ananassa HOM05D003458 ORTHO05D003854 1.8e-12 76.6 72 51.4
Ah.01g016990 Amaranthus hybridus HOM05D003458 ORTHO05D003854 2.3e-12 76.3 60 56.7
PGSC0003DMG400014210 Solanum tuberosum HOM05D003458 ORTHO05D003854 2.3e-12 76.3 73 53.4
Sed0018915 Sechium edule HOM05D003458 ORTHO05D003854 3.0e-12 75.9 72 54.2
CAN.G407.1 Capsicum annuum HOM05D003458 ORTHO05D003854 3.9e-12 75.5 73 52.1
FAN02G0674 Fragaria x ananassa HOM05D003458 ORTHO05D003854 8.7e-12 74.3 72 50.0
FAN14G3070 Fragaria x ananassa HOM05D003458 ORTHO05D003854 8.7e-12 74.3 72 50.0
Solyc03g117590.3 Solanum lycopersicum HOM05D003458 ORTHO05D003854 8.7e-12 74.3 73 52.1
Sopen03g036500 Solanum pennellii HOM05D003458 ORTHO05D003854 8.7e-12 74.3 73 52.1
RcHm_v2.0_Chr2g0132701 Rosa chinensis HOM05D003458 ORTHO05D003854 1.1e-11 73.9 72 50.0
TAR636G1057 Trochodendron aralioides HOM05D003458 ORTHO05D003854 1.1e-11 73.9 70 51.4
GSVIVG01015991001 Vitis vinifera HOM05D003458 ORTHO05D003854 1.5e-11 73.6 69 49.3
Dinv23277 Davidia involucrata HOM05D003458 ORTHO05D003854 1.9e-11 73.2 74 54.1
Eucgr.F03977 Eucalyptus grandis HOM05D003458 ORTHO05D003854 1.9e-11 73.2 72 51.4
FvH4_6g28480 Fragaria vesca HOM05D003458 ORTHO05D003854 1.9e-11 73.2 72 48.6
CAN.G1932.6 Capsicum annuum HOM05D003458 ORTHO05D003854 2.5e-11 72.8 71 52.1
Duzib160G0069 Durio zibethinus HOM05D003458 ORTHO05D003854 2.5e-11 72.8 70 51.4
Lj3g0014635 Lotus japonicus HOM05D003458 ORTHO05D003854 3.3e-11 72.4 71 52.1
Nitab4.5_0000886g0060 Nicotiana tabacum HOM05D003458 ORTHO05D003854 3.3e-11 72.4 67 53.7
Nitab4.5_0008962g0050 Nicotiana tabacum HOM05D003458 ORTHO05D003854 3.3e-11 72.4 67 50.7
Sed0021285 Sechium edule HOM05D003458 ORTHO05D003854 3.3e-11 72.4 72 51.4
Atru.chr1.2783 Acer truncatum HOM05D003458 ORTHO05D003854 4.3e-11 72.0 70 48.6
MSTRG.9399 Avicennia marina HOM05D003458 ORTHO05D003854 4.3e-11 72.0 72 55.6
CANSAT56G4248 Cannabis sativa HOM05D003458 ORTHO05D003854 4.3e-11 72.0 71 52.1
CiPaw.01G255600 Carya illinoinensis HOM05D003458 ORTHO05D003854 4.3e-11 72.0 70 50.0
ECA232G4261 Erigeron canadensis HOM05D003458 ORTHO05D003854 4.3e-11 72.0 76 48.7
HanXRQChr16g0499401 Helianthus annuus HOM05D003458 ORTHO05D003854 4.3e-11 72.0 75 48.0
HanXRQChr09g0274111 Helianthus annuus HOM05D003458 ORTHO05D003854 5.6e-11 71.6 75 48.0
Lj3g0007846 Lotus japonicus HOM05D003458 ORTHO05D003854 5.6e-11 71.6 75 50.7
Oeu018279.2 Olea europaea HOM05D003458 ORTHO05D003854 5.6e-11 71.6 72 52.8
TWI12G1059 Tripterygium wilfordii HOM05D003458 ORTHO05D003854 5.6e-11 71.6 73 50.7
Hma1.2p1_0109F.1_g052660 Hydrangea macrophylla HOM05D003458 ORTHO05D003854 7.4e-11 71.2 74 50.0
Peaxi162Scf00207g00438 Petunia axillaris HOM05D003458 ORTHO05D003854 7.4e-11 71.2 71 49.3
Solyc06g068500.3 Solanum lycopersicum HOM05D003458 ORTHO05D003854 7.4e-11 71.2 73 46.6
Sopen06g025750 Solanum pennellii HOM05D003458 ORTHO05D003854 7.4e-11 71.2 73 46.6
Thecc.06G043800 Theobroma cacao HOM05D003458 ORTHO05D003854 7.4e-11 71.2 72 51.4
TWI18G0048 Tripterygium wilfordii HOM05D003458 ORTHO05D003854 7.4e-11 71.2 73 50.7
DCAR_025553 Daucus carota HOM05D003458 ORTHO05D003854 9.6e-11 70.9 73 49.3
Eucgr.J03121 Eucalyptus grandis HOM05D003458 ORTHO05D003854 9.6e-11 70.9 76 47.4
VMungo0331G1722 Vigna mungo HOM05D003458 ORTHO05D003854 9.6e-11 70.9 73 49.3
arahy.Tifrunner.gnm1.ann1.HTFE1H Arachis hypogaea HOM05D003458 ORTHO05D003854 1.3e-10 70.5 71 49.3
CiPaw.02G162800 Carya illinoinensis HOM05D003458 ORTHO05D003854 1.3e-10 70.5 72 50.0
COL.COLO4_26747 Corchorus olitorius HOM05D003458 ORTHO05D003854 1.3e-10 70.5 68 51.5
PSO017G5603 Papaver somniferum HOM05D003458 ORTHO05D003854 1.3e-10 70.5 74 47.3
PSO063G6005 Papaver somniferum HOM05D003458 ORTHO05D003854 1.3e-10 70.5 74 47.3
PGSC0003DMG400028488 Solanum tuberosum HOM05D003458 ORTHO05D003854 1.3e-10 70.5 73 46.6
Ciclev10026659m.g Citrus clementina HOM05D003458 ORTHO05D003854 1.6e-10 70.1 73 49.3
Gohir.A05G118300 Gossypium hirsutum HOM05D003458 ORTHO05D003854 1.6e-10 70.1 69 53.6
Gohir.D05G119000 Gossypium hirsutum HOM05D003458 ORTHO05D003854 1.6e-10 70.1 70 52.9
Gorai.009G122900 Gossypium raimondii HOM05D003458 ORTHO05D003854 1.6e-10 70.1 70 52.9
Lsat_1_v5_gn_4_86780 Lactuca sativa HOM05D003458 ORTHO05D003854 1.6e-10 70.1 75 45.3
Lsat_1_v5_gn_4_86800 Lactuca sativa HOM05D003458 ORTHO05D003854 1.6e-10 70.1 75 45.3
Prupe.3G100300 Prunus persica HOM05D003458 ORTHO05D003854 1.6e-10 70.1 72 50.0
Actinidia08942 Actinidia chinensis HOM05D000470 ORTHO05D003854 2.8e-10 69.3 70 48.6
Cpa.g.sc362.2 Carica papaya HOM05D003458 ORTHO05D003854 2.8e-10 69.3 69 49.3
MELO3C026732.2 Cucumis melo HOM05D003458 ORTHO05D003854 2.8e-10 69.3 73 50.7
Glyma.07G021800 Glycine max HOM05D003458 ORTHO05D003854 2.8e-10 69.3 73 52.1
Glyma.08G220000 Glycine max HOM05D003458 ORTHO05D003854 2.8e-10 69.3 74 51.4
Lalb_Chr25g0278771 Lupinus albus HOM05D003458 ORTHO05D003854 3.7e-10 68.9 71 53.5
QL05p036319 Quercus lobata HOM05D003458 ORTHO05D003854 3.7e-10 68.9 75 48.0
TAR625G0694 Trochodendron aralioides HOM05D003458 ORTHO05D003854 3.7e-10 68.9 71 49.3
ClCG10G012870 Citrullus lanatus HOM05D003458 ORTHO05D003854 4.8e-10 68.6 67 52.2
PGR031G3767 Punica granatum HOM05D003458 ORTHO05D003854 4.8e-10 68.6 76 48.7
PGR037G0008 Punica granatum HOM05D003458 ORTHO05D003854 4.8e-10 68.6 76 48.7
Sabra01G0029600 Salix brachista HOM05D003458 ORTHO05D003854 4.8e-10 68.6 76 47.4
THA.LOC104812418 Tarenaya hassleriana HOM05D003458 ORTHO05D003854 4.8e-10 68.6 72 48.6
Actinidia18254 Actinidia chinensis HOM05D003458 ORTHO05D003854 6.2e-10 68.2 69 50.7
AUR62025872 Chenopodium quinoa HOM05D003458 ORTHO05D003854 6.2e-10 68.2 72 48.6
Lalb_Chr01g0012021 Lupinus albus HOM05D003458 ORTHO05D003854 6.2e-10 68.2 70 47.1
Potri.001G043100 Populus trichocarpa HOM05D003458 ORTHO05D003854 6.2e-10 68.2 76 46.1
Hma1.2p1_0329F.1_g127190 Hydrangea macrophylla HOM05D003458 ORTHO05D003854 8.1e-10 67.8 69 49.3
Potri.003G183700 Populus trichocarpa HOM05D003458 ORTHO05D003854 8.1e-10 67.8 76 47.4
AUR62029843 Chenopodium quinoa HOM05D003458 ORTHO05D003854 1.1e-09 67.4 73 47.9
DCAR_016307 Daucus carota HOM05D003458 ORTHO05D003854 1.1e-09 67.4 75 44.0
DCAR_016308 Daucus carota HOM05D003458 ORTHO05D003854 1.1e-09 67.4 75 44.0
Eucgr.F03971 Eucalyptus grandis HOM05D003458 ORTHO05D003854 1.1e-09 67.4 74 48.6
TPR.G3351 Trifolium pratense HOM05D003458 ORTHO05D003854 1.1e-09 67.4 65 49.2
arahy.Tifrunner.gnm1.ann1.RZ8KW2 Arachis hypogaea HOM05D003458 ORTHO05D003854 1.4e-09 67.0 76 44.7
arahy.Tifrunner.gnm1.ann1.52HH2Q Arachis hypogaea HOM05D003458 ORTHO05D003854 1.8e-09 66.6 75 46.7
arahy.Tifrunner.gnm1.ann1.BDT6Z1 Arachis hypogaea HOM05D003458 ORTHO05D003854 1.8e-09 66.6 75 46.7
CSS0014583 Camellia sinensis var. sinensis HOM05D003458 ORTHO05D003854 1.8e-09 66.6 72 50.0
MD09G1225800 Malus domestica HOM05D003458 ORTHO05D003854 1.8e-09 66.6 73 45.2
PGR102G2985 Punica granatum HOM05D003458 ORTHO05D003854 1.8e-09 66.6 72 47.2
MSTRG.22803 Avicennia marina HOM05D003458 ORTHO05D003854 2.4e-09 66.2 72 47.2
Migut.I00685 Erythranthe guttata HOM05D003458 ORTHO05D003854 2.4e-09 66.2 71 47.9
Oeu004558.1 Olea europaea HOM05D003458 ORTHO05D003854 2.4e-09 66.2 102 40.2
Phvul.010G162600 Phaseolus vulgaris HOM05D003458 ORTHO05D003854 4.0e-09 65.5 73 47.9
Sabra03G0134200 Salix brachista HOM05D003458 ORTHO05D003854 5.3e-09 65.1 76 47.4
EL10Ac5g11419 Beta vulgaris HOM05D003458 ORTHO05D003854 6.9e-09 64.7 70 45.7
Aa31LG4G1230 Aethionema arabicum HOM05D003458 ORTHO05D003854 9.0e-09 64.3 67 49.3
unitig_61.g26225 Utricularia gibba HOM05D003458 ORTHO05D003854 9.0e-09 64.3 72 51.4
Actinidia25473 Actinidia chinensis HOM05D003458 ORTHO05D003854 1.2e-08 63.9 72 50.0
Medtr4g007300 Medicago truncatula HOM05D003458 ORTHO05D003854 1.2e-08 63.9 73 46.6
SEGI_25751 Sequoiadendron giganteum HOM05D003458 ORTHO05D003854 1.2e-08 63.9 65 46.2
Duzib235G1193 Durio zibethinus HOM05D003458 ORTHO05D003854 1.5e-08 63.5 70 47.1
MD17G1224600 Malus domestica HOM05D003458 ORTHO05D003854 1.5e-08 63.5 75 44.0
Lsat_1_v5_gn_1_30900 Lactuca sativa HOM05D003458 ORTHO05D003854 5.8e-08 61.6 70 45.7
arahy.Tifrunner.gnm1.ann1.A1Q64B Arachis hypogaea HOM05D003458 ORTHO05D003854 1.7e-07 60.1 86 39.5
arahy.Tifrunner.gnm1.ann1.VHV24A Arachis hypogaea HOM05D003458 ORTHO05D003854 1.7e-07 60.1 86 39.5
Thhalv10019250m.g Eutrema salsugineum HOM05D003458 ORTHO05D003854 3.8e-07 58.9 66 43.9
Nitab4.5_0002700g0120 Nicotiana tabacum HOM05D003458 ORTHO05D003854 3.8e-07 58.9 49 55.1
BcaC08g47535 Brassica carinata HOM05D003458 ORTHO05D003854 6.4e-07 58.2 71 40.8
BolC6t40375H Brassica oleracea HOM05D003458 ORTHO05D003854 6.4e-07 58.2 71 40.8
Sp5g34820 Schrenkiella parvula HOM05D003458 ORTHO05D003854 6.4e-07 58.2 67 41.8
BcaB02g08712 Brassica carinata HOM05D003458 ORTHO05D003854 8.4e-07 57.8 66 43.9
BcaB05g25215 Brassica carinata HOM05D003458 ORTHO05D003854 8.4e-07 57.8 66 43.9
BcaC08g45347 Brassica carinata HOM05D003458 ORTHO05D003854 8.4e-07 57.8 66 43.9
A07p44770 Brassica napus HOM05D003458 ORTHO05D003854 8.4e-07 57.8 66 43.9
C06p29610 Brassica napus HOM05D003458 ORTHO05D003854 8.4e-07 57.8 66 43.9
BolC6t38126H Brassica oleracea HOM05D003458 ORTHO05D003854 8.4e-07 57.8 66 43.9
BraA07t31985Z Brassica rapa HOM05D003458 ORTHO05D003854 8.4e-07 57.8 66 43.9
CARHR073560 Cardamine hirsuta HOM05D003458 ORTHO05D003854 8.4e-07 57.8 66 43.9
SalBow6G5477 Salvia bowleyana HOM05D003458 ORTHO05D003854 8.4e-07 57.8 70 44.3
C06p53590 Brassica napus HOM05D003458 ORTHO05D003854 1.9e-06 56.6 71 39.4
Nitab4.5_0009867g0010 Nicotiana tabacum HOM05D003458 ORTHO05D003854 3.2e-06 55.8 48 52.1
C02p36810 Brassica napus HOM05D003458 ORTHO05D003854 5.5e-06 55.1 71 38.0
A02p23060 Brassica napus HOM05D003458 ORTHO05D003854 7.1e-06 54.7 66 40.9
A07p26930 Brassica napus HOM05D003458 ORTHO05D003854 7.1e-06 54.7 66 40.9
BolC2t09685H Brassica oleracea HOM05D003458 ORTHO05D003854 7.1e-06 54.7 66 40.9
BraA02t07304Z Brassica rapa HOM05D003458 ORTHO05D003854 7.1e-06 54.7 66 40.9
BraA07t30338Z Brassica rapa HOM05D003458 ORTHO05D003854 7.1e-06 54.7 66 40.9
Psat7g263240 Pisum sativum HOM05D003458 ORTHO05D003854 7.1e-06 54.7 77 37.7


User provided reference genes

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