Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0982 Ceratophyllum demersum HOM05D007561 ORTHO05D007661 4.4e-228 794.3 403 100.0
CDE07G1728 Ceratophyllum demersum HOM05D004853 ORTHO05D005865 9.1e-165 583.9 390 79.5
TAR561G0001 Trochodendron aralioides HOM05D007561 ORTHO05D007661 1.7e-17 94.7 450 27.6
Cpa.g.sc33.185 Carica papaya HOM05D007561 ORTHO05D007661 1.8e-11 74.7 380 26.6
Glyma.19G123300 Glycine max HOM05D007561 ORTHO05D007661 4.0e-11 73.6 353 26.9
TWI77G0394 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 5.2e-11 73.2 470 25.7
Gohir.A05G393000 Gossypium hirsutum HOM05D007561 ORTHO05D007661 6.8e-11 72.8 353 25.5
Potri.005G090000 Populus trichocarpa HOM05D007561 ORTHO05D007661 8.9e-11 72.4 449 26.1
Gohir.D13G117500 Gossypium hirsutum HOM05D007561 ORTHO05D007661 1.2e-10 72.0 410 27.3
Gorai.013G132100 Gossypium raimondii HOM05D007561 ORTHO05D007661 1.2e-10 72.0 410 27.3
Gohir.A13G114700 Gossypium hirsutum HOM05D007561 ORTHO05D007661 2.0e-10 71.2 392 28.3
Lj2A414T29 Lonicera japonica HOM05D007561 ORTHO05D007661 2.0e-10 71.2 389 25.2
Gorai.012G026500 Gossypium raimondii HOM05D007561 ORTHO05D007661 3.4e-10 70.5 355 25.6
Gohir.D04G022850 Gossypium hirsutum HOM05D007561 ORTHO05D007661 4.4e-10 70.1 356 25.8
Thecc.05G190500 Theobroma cacao HOM05D007561 ORTHO05D007661 1.7e-09 68.2 383 25.8
Ciclev10013885m.g Citrus clementina HOM05D007561 ORTHO05D007661 3.8e-09 67.0 408 26.2
DCAR_009109 Daucus carota HOM05D007561 ORTHO05D007661 6.4e-09 66.2 433 26.1
PSO732G0159 Papaver somniferum HOM05D007561 ORTHO05D007661 6.4e-09 66.2 403 26.6
Manes.04G066400 Manihot esculenta HOM05D007561 ORTHO05D007661 8.4e-09 65.9 382 27.0
TWI74G0078 Tripterygium wilfordii HOM05D007561 ORTHO05D007661 8.4e-09 65.9 420 25.7
CiPaw.09G161100 Carya illinoinensis HOM05D007561 ORTHO05D007661 1.9e-08 64.7 301 28.6
Duzib177G0099 Durio zibethinus HOM05D007561 ORTHO05D007661 1.9e-08 64.7 376 27.7
Phvul.001G109100 Phaseolus vulgaris HOM05D007561 ORTHO05D007661 2.4e-08 64.3 343 26.5
VMungo1383G3023 Vigna mungo HOM05D007561 ORTHO05D007661 4.1e-08 63.5 331 26.3
Aqoxy2G00670 Aquilegia oxysepala HOM05D007561 ORTHO05D007661 9.2e-08 62.4 425 24.2
PSO675G2416 Papaver somniferum HOM05D007561 ORTHO05D007661 9.2e-08 62.4 411 25.5
Dinv37052 Davidia involucrata HOM05D007561 ORTHO05D007661 1.6e-07 61.6 424 25.5
Sabra07G0062300 Salix brachista HOM05D007561 ORTHO05D007661 1.6e-07 61.6 327 26.6
Nitab4.5_0000613g0170 Nicotiana tabacum HOM05D007561 ORTHO05D007661 2.1e-07 61.2 446 26.5
PGSC0003DMG400028120 Solanum tuberosum HOM05D007561 ORTHO05D007661 2.1e-07 61.2 345 24.9
SalBow6G1989 Salvia bowleyana HOM05D007561 ORTHO05D007661 2.7e-07 60.8 382 25.4
SalBow6G6384 Salvia bowleyana HOM05D007561 ORTHO05D007661 2.7e-07 60.8 380 25.0
Ca_08339_v3 Cicer arietinum L. HOM05D007561 ORTHO05D007661 6.0e-07 59.7 392 25.5
Sabra05G0074100 Salix brachista HOM05D007561 ORTHO05D007661 1.3e-06 58.5 423 23.6
Lj1g0025432 Lotus japonicus HOM05D007561 ORTHO05D007661 1.7e-06 58.2 303 24.8
Haze_20355 Corylus avellana HOM05D007561 ORTHO05D007661 2.3e-06 57.8 268 25.7
Cfa019892 Carpinus fangiana HOM05D007561 ORTHO05D007661 3.0e-06 57.4 286 25.2
Oeu020265.1 Olea europaea HOM05D007561 ORTHO05D007661 3.0e-06 57.4 483 25.9
Potri.007G074056 Populus trichocarpa HOM05D007561 ORTHO05D007661 3.0e-06 57.4 443 23.7
ATR0068G026 Amborella trichopoda HOM05D007561 ORTHO05D007661 5.1e-06 56.6 317 27.4
Glyma.03G118900 Glycine max HOM05D007561 ORTHO05D007661 5.1e-06 56.6 408 24.8
Sed0024594 Sechium edule HOM05D007561 ORTHO05D007661 5.1e-06 56.6 328 26.2
Migut.J01597 Erythranthe guttata HOM05D007561 ORTHO05D007661 6.6e-06 56.2 282 29.1
Lalb_Chr22g0358291 Lupinus albus HOM05D007561 ORTHO05D007661 8.7e-06 55.8 318 27.0
Phvul.004G052600 Phaseolus vulgaris HOM05D025134 ORTHO05D020753 8.7e-06 55.8 305 28.2


User provided reference genes

Program Settings