Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 1.5e-92 342.8 170 100.0
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 5.6e-47 191.4 162 59.9
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 3.6e-46 188.7 183 55.2
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 4.7e-46 188.3 181 56.9
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 8.0e-46 187.6 192 52.6
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 1.0e-45 187.2 193 53.4
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 1.4e-45 186.8 172 58.7
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 1.4e-45 186.8 196 53.1
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 1.4e-45 186.8 139 66.9
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 3.1e-45 185.7 181 55.2
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 5.2e-45 184.9 182 53.8
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 6.8e-45 184.5 176 56.8
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 1.2e-44 183.7 188 53.2
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 2.0e-44 183.0 183 54.6
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 2.6e-44 182.6 173 54.9
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 2.6e-44 182.6 176 55.1
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 3.4e-44 182.2 178 55.1
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 3.4e-44 182.2 192 51.0
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 4.4e-44 181.8 187 53.5
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 5.8e-44 181.4 176 54.0
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 5.8e-44 181.4 173 54.9
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 5.8e-44 181.4 187 52.4
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 5.8e-44 181.4 186 53.2
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 7.5e-44 181.0 189 51.9
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 7.5e-44 181.0 183 54.1
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 1.3e-43 180.3 190 53.7
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 1.3e-43 180.3 181 55.2
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 2.2e-43 179.5 192 51.0
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 2.9e-43 179.1 183 51.9
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 2.9e-43 179.1 187 51.3
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 2.9e-43 179.1 172 54.1
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 3.7e-43 178.7 196 49.5
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 3.7e-43 178.7 176 56.8
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 4.9e-43 178.3 175 55.4
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 6.4e-43 177.9 184 53.8
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 6.4e-43 177.9 178 52.8
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 8.3e-43 177.6 186 52.2
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 8.3e-43 177.6 174 55.7
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 1.4e-42 176.8 184 51.1
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 1.9e-42 176.4 186 51.6
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 2.4e-42 176.0 178 53.9
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 2.4e-42 176.0 186 51.6
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 3.2e-42 175.6 181 51.9
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 5.4e-42 174.9 176 51.1
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 5.4e-42 174.9 136 65.4
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 7.0e-42 174.5 148 60.8
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 7.0e-42 174.5 178 50.0
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 9.2e-42 174.1 170 54.1
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 1.2e-41 173.7 136 61.8
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 1.2e-41 173.7 173 52.6
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 1.6e-41 173.3 179 52.5
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.6e-41 173.3 189 50.3
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 2.7e-41 172.6 173 53.8
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 6.0e-41 171.4 179 52.0
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 6.0e-41 171.4 182 52.2
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 7.8e-41 171.0 162 56.2
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 7.8e-41 171.0 194 50.5
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 1.0e-40 170.6 173 52.6
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 1.0e-40 170.6 190 51.1
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 1.3e-40 170.2 162 55.6
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 1.7e-40 169.9 145 59.3
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 1.7e-40 169.9 185 49.7
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 2.3e-40 169.5 182 52.2
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 2.3e-40 169.5 182 52.2
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 3.0e-40 169.1 191 51.3
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 5.0e-40 168.3 183 51.4
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 6.6e-40 167.9 134 62.7
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 1.1e-39 167.2 192 52.1
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 1.9e-39 166.4 190 50.5
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 3.3e-39 165.6 191 46.1
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 3.3e-39 165.6 164 55.5
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 7.3e-39 164.5 145 60.7
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 1.6e-38 163.3 184 46.7
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 2.1e-38 162.9 191 45.5
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 1.4e-37 160.2 192 45.8
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 1.8e-37 159.8 185 46.5
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.8e-37 159.8 97 74.2
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 2.3e-37 159.5 192 44.8
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 2.3e-37 159.5 192 44.8
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 2.3e-37 159.5 97 74.2
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 3.1e-37 159.1 192 45.3
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 4.0e-37 158.7 144 56.2
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 1.5e-36 156.8 96 75.0
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 2.0e-36 156.4 199 45.2
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 2.6e-36 156.0 194 44.8
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 2.6e-36 156.0 194 44.8
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 3.4e-36 155.6 98 72.4
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 3.2e-34 149.1 176 51.7
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 3.2e-34 149.1 193 44.6
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 5.4e-34 148.3 182 47.8
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 9.2e-34 147.5 98 71.4
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 4.6e-33 145.2 155 49.7
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 7.8e-33 144.4 127 56.7
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 1.1e-31 140.6 242 36.8
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 2.1e-30 136.3 136 52.2
Cre18.g749347 Chlamydomonas reinhardtii HOM05D006601 ORTHO05D008281 4.4e-20 102.1 86 55.8
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 7.6e-20 101.3 118 49.2
MCO05G050 Micromonas commoda HOM05D006601 ORTHO05D008281 7.6e-20 101.3 89 57.3
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 3.2e-18 95.9 180 36.7
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 3.5e-17 92.4 139 39.6
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 1.3e-16 90.5 147 39.5
Cfa024623 Carpinus fangiana HOM05D006601 ORTHO05D008281 8.7e-16 87.8 173 32.4
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 9.0e-13 77.8 198 30.3
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 4.6e-09 65.5 130 39.2
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 4.6e-09 65.5 130 39.2
EL10Ac7g17292 Beta vulgaris HOM05D006601 ORTHO05D008281 3.0e-08 62.8 31 77.4
Aqoxy2G01117 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 3.9e-08 62.4 31 77.4


User provided reference genes

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