Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0885 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 3.1e-74 281.6 130 100.0
CDE06G1347 Ceratophyllum demersum HOM05D007587 ORTHO05D009657 5.6e-39 164.5 123 59.3
Zm00001eb052110 Zea mays HOM05D007587 ORTHO05D009657 2.7e-25 119.0 183 36.1
Nn5g27362 Nelumbo nucifera HOM05D007587 ORTHO05D009657 3.3e-15 85.5 55 63.6
Potri.005G150300 Populus trichocarpa HOM05D007587 ORTHO05D009657 5.6e-15 84.7 52 61.5
QL02p001961 Quercus lobata HOM05D007587 ORTHO05D009657 9.6e-15 84.0 44 75.0
MBI16_g05020_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 2.1e-14 82.8 69 53.6
Nn5g27361 Nelumbo nucifera HOM05D007587 ORTHO05D009657 2.1e-14 82.8 50 62.0
GSVIVG01034787001 Vitis vinifera HOM05D007587 ORTHO05D009657 2.1e-14 82.8 45 73.3
MBI16_g05021_MAGBIO Magnolia biondii HOM05D007587 ORTHO05D009657 4.8e-14 81.6 65 53.8
Nn5g27360 Nelumbo nucifera HOM05D007587 ORTHO05D009657 8.1e-14 80.9 48 62.5
TAR381G0827 Trochodendron aralioides HOM05D007587 ORTHO05D009657 8.1e-14 80.9 44 70.5
Atru.chr13.897 Acer truncatum HOM05D007587 ORTHO05D009657 1.4e-13 80.1 45 66.7
Cc10_g07830 Coffea canephora HOM05D007587 ORTHO05D009657 1.8e-13 79.7 44 68.2
CiPaw.15G043600 Carya illinoinensis HOM05D007587 ORTHO05D009657 4.0e-13 78.6 63 50.8
Hma1.2p1_2651F.1_g326150 Hydrangea macrophylla HOM05D007587 ORTHO05D009657 5.3e-13 78.2 44 65.9
Manes.18G051550 Manihot esculenta HOM05D007587 ORTHO05D009657 6.9e-13 77.8 48 62.5
PGSC0003DMG400004952 Solanum tuberosum HOM05D007587 ORTHO05D009657 6.9e-13 77.8 55 58.2
Nitab4.5_0015343g0010 Nicotiana tabacum HOM05D007587 ORTHO05D009657 9.0e-13 77.4 46 63.0
CiPaw.15G043500 Carya illinoinensis HOM05D007587 ORTHO05D009657 1.2e-12 77.0 44 68.2
COL.COLO4_35374 Corchorus olitorius HOM05D007587 ORTHO05D009657 1.5e-12 76.6 48 64.6
Atru.chr3.473 Acer truncatum HOM05D007587 ORTHO05D009657 2.0e-12 76.3 47 57.4
Cfa017911 Carpinus fangiana HOM05D007587 ORTHO05D009657 2.0e-12 76.3 44 70.5
AagrBONN_evm.TU.Sc2ySwM_117.169 Anthoceros agrestis HOM05D007587 ORTHO05D009657 2.6e-12 75.9 67 44.8
CSS0045179 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 2.6e-12 75.9 44 65.9
CAN.G416.39 Capsicum annuum HOM05D007587 ORTHO05D009657 2.6e-12 75.9 46 60.9
Os03g0673700 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 4.4e-12 75.1 43 67.4
Actinidia29637 Actinidia chinensis HOM05D007587 ORTHO05D009657 5.8e-12 74.7 45 60.0
Dinv39924 Davidia involucrata HOM05D007587 ORTHO05D009657 5.8e-12 74.7 59 47.5
Nn4g24320 Nelumbo nucifera HOM05D007587 ORTHO05D009657 5.8e-12 74.7 44 63.6
Potri.005G130750 Populus trichocarpa HOM05D007587 ORTHO05D009657 5.8e-12 74.7 59 50.8
vmacro04608 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 5.8e-12 74.7 47 59.6
Phvul.003G249500 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 1.3e-11 73.6 84 36.9
Rhsim07G0216100 Rhododendron simsii HOM05D007587 ORTHO05D009657 1.3e-11 73.6 44 63.6
Rhsim07G0216200 Rhododendron simsii HOM05D007587 ORTHO05D009657 1.3e-11 73.6 44 63.6
TAR381G1104 Trochodendron aralioides HOM05D007587 ORTHO05D009657 1.3e-11 73.6 64 42.2
Os03g0673400 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 3.8e-11 72.0 43 65.1
Os12g0596101 Oryza sativa ssp. japonica HOM05D007587 ORTHO05D009657 3.8e-11 72.0 43 60.5
Thecc.08G082100 Theobroma cacao HOM05D007587 ORTHO05D009657 3.8e-11 72.0 46 63.0
Zm00001eb135300 Zea mays HOM05D007587 ORTHO05D009657 3.8e-11 72.0 43 60.5
vmacro04607 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 4.9e-11 71.6 47 55.3
vmacro04609 Vaccinium macrocarpon HOM05D007587 ORTHO05D009657 4.9e-11 71.6 44 61.4
Ciclev10027038m.g Citrus clementina HOM05D007587 ORTHO05D009657 6.4e-11 71.2 76 39.5
Lj7C15T6 Lonicera japonica HOM05D007587 ORTHO05D009657 6.4e-11 71.2 59 45.8
Manes.12G097400 Manihot esculenta HOM05D007587 ORTHO05D009657 6.4e-11 71.2 45 55.6
Phvul.002G023800 Phaseolus vulgaris HOM05D007587 ORTHO05D009657 6.4e-11 71.2 74 40.5
Prupe.7G145500 Prunus persica HOM05D007587 ORTHO05D009657 6.4e-11 71.2 64 39.1
Mapoly0026s0006 Marchantia polymorpha HOM05D007587 ORTHO05D009657 8.4e-11 70.9 68 45.6
QL06p044263 Quercus lobata HOM05D007587 ORTHO05D009657 8.4e-11 70.9 59 42.4
Psat2g163680 Pisum sativum HOM05D007587 ORTHO05D009657 1.1e-10 70.5 69 39.1
Gohir.A11G188150 Gossypium hirsutum HOM05D007587 ORTHO05D009657 1.4e-10 70.1 50 48.0
Gohir.D11G194650 Gossypium hirsutum HOM05D007587 ORTHO05D009657 1.4e-10 70.1 50 48.0
Gorai.007G208100 Gossypium raimondii HOM05D007587 ORTHO05D009657 1.4e-10 70.1 50 48.0
Lj2g0021293 Lotus japonicus HOM05D007587 ORTHO05D009657 1.4e-10 70.1 52 46.2
Potri.007G034000 Populus trichocarpa HOM05D007587 ORTHO05D009657 1.4e-10 70.1 47 51.1
Migut.H00502 Erythranthe guttata HOM05D007587 ORTHO05D009657 1.9e-10 69.7 57 43.9
Gohir.A01G124700 Gossypium hirsutum HOM05D007587 ORTHO05D009657 1.9e-10 69.7 48 56.2
Gohir.D01G112300 Gossypium hirsutum HOM05D007587 ORTHO05D009657 1.9e-10 69.7 48 56.2
Gorai.002G137200 Gossypium raimondii HOM05D007587 ORTHO05D009657 1.9e-10 69.7 48 56.2
Lsat_1_v5_gn_3_93981 Lactuca sativa HOM05D007587 ORTHO05D009657 1.9e-10 69.7 59 49.2
SalBow1G8004 Salvia bowleyana HOM05D007587 ORTHO05D009657 1.9e-10 69.7 57 43.9
Glyma.19G074100 Glycine max HOM05D007587 ORTHO05D009657 2.4e-10 69.3 48 47.9
Sed0017528 Sechium edule HOM05D007587 ORTHO05D009657 2.4e-10 69.3 55 47.3
Psat0s261g0120 Pisum sativum HOM05D007587 ORTHO05D009657 3.2e-10 68.9 63 41.3
Glyma.02G061500 Glycine max HOM05D007587 ORTHO05D009657 4.2e-10 68.6 51 45.1
CSS0038445 Camellia sinensis var. sinensis HOM05D007587 ORTHO05D009657 5.4e-10 68.2 59 44.1
Glyma.16G143900 Glycine max HOM05D007587 ORTHO05D009657 5.4e-10 68.2 51 45.1
Manes.13G132300 Manihot esculenta HOM05D007587 ORTHO05D009657 5.4e-10 68.2 64 42.2
ClCG02G013040 Citrullus lanatus HOM05D007587 ORTHO05D009657 7.1e-10 67.8 65 40.0
Cc07_g05380 Coffea canephora HOM05D007587 ORTHO05D009657 7.1e-10 67.8 58 41.4
ECA238G1538 Erigeron canadensis HOM05D003002 ORTHO05D002276 7.1e-10 67.8 47 48.9
Glyma.11G061100 Glycine max HOM05D007587 ORTHO05D009657 7.1e-10 67.8 59 44.1
Pp3c20_19960 Physcomitrium patens HOM05D007587 ORTHO05D009657 7.1e-10 67.8 47 55.3
SalBow7G1850 Salvia bowleyana HOM05D007587 ORTHO05D009657 7.1e-10 67.8 43 58.1
Cpa.g.sc15.59 Carica papaya HOM05D007587 ORTHO05D009657 1.2e-09 67.0 54 40.7
COL.COLO4_22178 Corchorus olitorius HOM05D007587 ORTHO05D009657 1.2e-09 67.0 50 46.0
Solyc02g090080.1 Solanum lycopersicum HOM05D007587 ORTHO05D009657 1.6e-09 66.6 58 44.8
Medtr5g018610 Medicago truncatula HOM05D007587 ORTHO05D009657 2.1e-09 66.2 62 38.7
Nitab4.5_0005594g0030 Nicotiana tabacum HOM05D007587 ORTHO05D009657 2.1e-09 66.2 64 39.1
Thecc.01G045600 Theobroma cacao HOM05D007587 ORTHO05D009657 2.7e-09 65.9 50 44.0
TPR.G29850 Trifolium pratense HOM05D007587 ORTHO05D009657 2.7e-09 65.9 45 46.7
FAN23G2556 Fragaria x ananassa HOM05D007587 ORTHO05D009657 3.5e-09 65.5 46 43.5
FAN26G0670 Fragaria x ananassa HOM05D007587 ORTHO05D009657 4.6e-09 65.1 46 43.5
FAN28G1310 Fragaria x ananassa HOM05D007587 ORTHO05D009657 6.0e-09 64.7 51 43.1
CBR_g28808 Chara braunii HOM05D007587 ORTHO05D009657 1.0e-08 63.9 86 38.4
arahy.Tifrunner.gnm1.ann1.986LRW Arachis hypogaea HOM05D007587 ORTHO05D009657 3.0e-08 62.4 57 45.6
arahy.Tifrunner.gnm1.ann1.JQT6QK Arachis hypogaea HOM05D007587 ORTHO05D009657 3.0e-08 62.4 57 45.6
Lsat_1_v5_gn_2_87241 Lactuca sativa HOM05D007587 ORTHO05D009657 6.6e-08 61.2 47 44.7
Pp3c24_89 Physcomitrium patens HOM05D007587 ORTHO05D009657 3.3e-07 58.9 47 51.1
Pp3c19_1061 Physcomitrium patens HOM05D007587 ORTHO05D009657 2.8e-06 55.8 45 51.1
Pp3c19_1062 Physcomitrium patens HOM05D007587 ORTHO05D009657 8.1e-06 54.3 44 50.0


User provided reference genes

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