Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 1.4e-193 679.5 346 100.0
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 7.0e-89 331.6 333 54.4
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 2.5e-86 323.2 323 52.0
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 4.0e-84 315.8 338 50.9
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 2.0e-83 313.5 324 52.5
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 3.7e-82 309.3 337 50.4
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 1.4e-81 307.4 311 53.4
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 1.4e-81 307.4 322 50.0
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 2.4e-81 306.6 330 51.2
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.4e-81 306.6 335 50.4
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 3.2e-81 306.2 331 49.8
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 4.1e-81 305.8 327 49.8
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 9.2e-81 304.7 335 50.7
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.2e-80 304.3 332 50.0
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 2.0e-80 303.5 311 52.1
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 3.5e-80 302.8 328 50.9
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 6.0e-80 302.0 331 49.2
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 7.8e-80 301.6 336 49.7
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 1.0e-79 301.2 326 50.9
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 1.3e-79 300.8 327 48.9
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 1.7e-79 300.4 331 49.5
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 1.7e-79 300.4 344 49.1
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 3.0e-79 299.7 338 51.8
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 5.0e-79 298.9 329 48.3
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 5.0e-79 298.9 313 52.7
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 1.1e-78 297.7 321 49.2
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 2.5e-78 296.6 331 49.2
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 5.6e-78 295.4 317 50.2
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 7.3e-78 295.0 317 51.4
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 7.3e-78 295.0 327 50.2
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 1.2e-77 294.3 331 48.3
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 1.2e-77 294.3 324 51.2
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 6.2e-77 292.0 329 50.2
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 6.2e-77 292.0 308 51.0
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 6.2e-77 292.0 322 51.6
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 1.1e-76 291.2 327 49.8
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 1.8e-76 290.4 332 48.2
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 1.2e-75 287.7 325 52.0
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 2.6e-75 286.6 323 50.5
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 3.4e-75 286.2 331 47.7
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 4.4e-75 285.8 327 48.9
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 4.4e-75 285.8 349 46.7
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 4.4e-75 285.8 322 50.3
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 5.8e-75 285.4 325 49.5
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 7.5e-75 285.0 329 48.6
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 9.8e-75 284.6 324 49.1
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 9.8e-75 284.6 331 51.4
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 1.3e-74 284.3 324 48.5
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 1.7e-74 283.9 327 48.0
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 1.7e-74 283.9 317 48.6
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 1.7e-74 283.9 311 51.8
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 2.2e-74 283.5 312 50.3
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 2.9e-74 283.1 323 48.9
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 2.9e-74 283.1 323 48.9
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 3.7e-74 282.7 339 49.0
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 6.4e-74 282.0 334 47.0
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.1e-73 281.2 329 48.9
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 5.4e-73 278.9 330 51.2
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 9.2e-73 278.1 337 47.5
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 9.2e-73 278.1 330 51.5
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 1.6e-72 277.3 326 48.5
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 1.6e-72 277.3 332 46.4
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 2.1e-72 276.9 330 50.9
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 2.1e-72 276.9 316 48.4
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 2.1e-72 276.9 324 47.8
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 4.6e-72 275.8 323 48.3
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 1.0e-71 274.6 316 48.7
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.7e-71 273.9 330 50.6
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 6.6e-71 271.9 330 50.9
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 1.5e-70 270.8 311 49.2
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.9e-70 270.4 324 50.6
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 3.3e-70 269.6 332 46.7
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 4.3e-70 269.2 327 46.5
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 5.6e-70 268.9 318 46.5
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 2.1e-69 266.9 328 47.3
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 2.1e-69 266.9 325 48.0
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 8.1e-69 265.0 321 48.3
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 6.8e-68 261.9 311 48.6
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 6.8e-68 261.9 319 47.6
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 5.8e-67 258.8 329 46.5
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 7.5e-67 258.5 423 37.4
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 6.0e-64 248.8 327 45.6
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 6.0e-64 248.8 309 45.0
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 1.3e-63 247.7 307 48.5
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 3.0e-63 246.5 332 42.5
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 1.1e-62 244.6 266 49.6
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 4.0e-60 236.1 308 45.8
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 3.4e-59 233.0 363 40.2
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 4.9e-58 229.2 288 47.2
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 4.9e-58 229.2 369 39.8
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 9.2e-57 224.9 254 49.6
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 5.6e-54 215.7 312 41.0
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 9.3e-49 198.4 258 45.7
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 8.4e-42 175.3 215 47.9
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 9.6e-38 161.8 359 31.5
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 1.1e-36 158.3 365 30.4
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 6.9e-36 155.6 355 35.2
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 2.9e-34 150.2 173 47.4
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 2.3e-31 140.6 207 42.5
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 1.2e-27 128.3 285 34.4
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 1.7e-26 124.4 130 48.5
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 3.0e-23 113.6 466 25.5
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 2.8e-21 107.1 96 60.4
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 2.6e-19 100.5 125 46.4
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 5.0e-18 96.3 84 61.9
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 9.4e-17 92.0 216 33.8
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 1.6e-16 91.3 170 37.6
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 7.9e-16 89.0 72 63.9
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 1.0e-15 88.6 111 48.6
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 2.3e-15 87.4 256 26.6
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 3.0e-15 87.0 261 26.8
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 7.4e-14 82.4 177 27.7
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 4.8e-13 79.7 124 41.9
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 2.4e-12 77.4 63 60.3
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 7.2e-09 65.9 41 73.2
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 2.1e-08 64.3 57 50.9
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 1.4e-07 61.6 41 68.3
SMO013G0006 Selaginella moellendorffii HOM05D006549 ORTHO05D008080 2.0e-06 57.8 241 22.0


User provided reference genes

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