Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0837 Ceratophyllum demersum HOM05D005079 ORTHO05D006362 5.1e-96 354.4 174 100.0
CDE04G3241 Ceratophyllum demersum HOM05D005079 ORTHO05D006362 8.2e-54 214.2 140 81.4
TAR629G2205 Trochodendron aralioides HOM05D005079 ORTHO05D006362 1.2e-20 104.0 117 52.1
Cc08_g12490 Coffea canephora HOM05D005079 ORTHO05D006362 3.5e-20 102.4 116 50.9
Nitab4.5_0008754g0010 Nicotiana tabacum HOM05D005079 ORTHO05D006362 7.8e-20 101.3 107 51.4
Migut.A00986 Erythranthe guttata HOM05D005079 ORTHO05D006362 1.0e-19 100.9 95 54.7
Lj8C262G4 Lonicera japonica HOM05D005079 ORTHO05D006362 3.8e-19 99.0 108 49.1
Psat4g071960 Pisum sativum HOM05D005079 ORTHO05D006362 5.0e-19 98.6 92 55.4
HanXRQChr17g0549661 Helianthus annuus HOM05D005079 ORTHO05D006362 8.6e-19 97.8 89 51.7
BraA01t02000Z Brassica rapa HOM05D005079 ORTHO05D006362 1.1e-18 97.4 98 55.1
CARHR223060 Cardamine hirsuta HOM05D005079 ORTHO05D006362 1.1e-18 97.4 99 53.5
Solyc06g060670.4 Solanum lycopersicum HOM05D005079 ORTHO05D006362 1.1e-18 97.4 83 60.2
AL7G38200 Arabidopsis lyrata HOM05D005079 ORTHO05D006362 1.5e-18 97.1 102 52.0
AL7G38250 Arabidopsis lyrata HOM05D005079 ORTHO05D006362 1.5e-18 97.1 102 52.0
Lj4g0012374 Lotus japonicus HOM05D005079 ORTHO05D006362 1.9e-18 96.7 107 51.4
AT4G16570 Arabidopsis thaliana HOM05D005079 ORTHO05D006362 2.5e-18 96.3 102 52.0
MELO3C005534.2 Cucumis melo HOM05D005079 ORTHO05D006362 2.5e-18 96.3 79 58.2
Nn1g01009 Nelumbo nucifera HOM05D005079 ORTHO05D006362 2.5e-18 96.3 111 47.7
Nitab4.5_0000618g0020 Nicotiana tabacum HOM05D005079 ORTHO05D006362 2.5e-18 96.3 95 51.6
MBI04_g09493_MAGBIO Magnolia biondii HOM05D005079 ORTHO05D006362 3.3e-18 95.9 87 57.5
C01p26130 Brassica napus HOM05D005079 ORTHO05D006362 4.3e-18 95.5 106 50.0
BolC1t02557H Brassica oleracea HOM05D005079 ORTHO05D006362 4.3e-18 95.5 106 50.0
Carub.0007s2483 Capsella rubella HOM05D005079 ORTHO05D006362 4.3e-18 95.5 77 62.3
Dinv39142 Davidia involucrata HOM05D005079 ORTHO05D006362 4.3e-18 95.5 106 50.0
Hma1.2p1_1786F.1_g302370 Hydrangea macrophylla HOM05D005079 ORTHO05D006362 4.3e-18 95.5 74 59.5
MD04G1063800 Malus domestica HOM05D005079 ORTHO05D006362 4.3e-18 95.5 95 53.7
TPR.G37701 Trifolium pratense HOM05D005079 ORTHO05D006362 4.3e-18 95.5 104 51.9
BcaC09g50374 Brassica carinata HOM05D005079 ORTHO05D006362 5.6e-18 95.1 98 52.0
BcaNung00170 Brassica carinata HOM05D005079 ORTHO05D006362 5.6e-18 95.1 108 50.9
CsaV3_5G004210 Cucumis sativus L. HOM05D005079 ORTHO05D006362 5.6e-18 95.1 84 57.1
Lsat_1_v5_gn_5_188000 Lactuca sativa HOM05D005079 ORTHO05D006362 5.6e-18 95.1 109 49.5
A01p20660 Brassica napus HOM05D005079 ORTHO05D006362 7.3e-18 94.7 107 50.5
CAN.G1037.9 Capsicum annuum HOM05D005079 ORTHO05D006362 7.3e-18 94.7 106 50.0
CANSAT21G1873 Cannabis sativa HOM05D005079 ORTHO05D006362 1.2e-17 94.0 82 58.5
Manes.01G080200 Manihot esculenta HOM05D005079 ORTHO05D006362 1.2e-17 94.0 83 57.8
PSO017G3550 Papaver somniferum HOM05D005079 ORTHO05D006362 1.6e-17 93.6 84 58.3
Eucgr.D02075 Eucalyptus grandis HOM05D005079 ORTHO05D006362 2.8e-17 92.8 90 51.1
Prupe.5G069000 Prunus persica HOM05D005079 ORTHO05D006362 2.8e-17 92.8 96 50.0
GSVIVG01001320001 Vitis vinifera HOM05D005079 ORTHO05D006362 2.8e-17 92.8 108 50.0
MSTRG.25528 Avicennia marina HOM05D005079 ORTHO05D006362 3.6e-17 92.4 91 54.9
EL10Ac5g13073 Beta vulgaris HOM05D005079 ORTHO05D006362 3.6e-17 92.4 75 57.3
Ca_21961_v3 Cicer arietinum L. HOM05D005079 ORTHO05D006362 3.6e-17 92.4 74 56.8
Hma1.2p1_1172F.1_g263540 Hydrangea macrophylla HOM05D005079 ORTHO05D006362 3.6e-17 92.4 74 58.1
Potri.003G076500 Populus trichocarpa HOM05D005079 ORTHO05D006362 3.6e-17 92.4 105 50.5
QL12p012230 Quercus lobata HOM05D005079 ORTHO05D006362 3.6e-17 92.4 98 49.0
Thecc.03G252100 Theobroma cacao HOM05D005079 ORTHO05D006362 4.7e-17 92.0 108 48.1
Cfa012713 Carpinus fangiana HOM05D005079 ORTHO05D006362 1.0e-16 90.9 86 53.5
AUR62042789 Chenopodium quinoa HOM05D005079 ORTHO05D006362 1.0e-16 90.9 74 56.8
Sp7g15190 Schrenkiella parvula HOM05D005079 ORTHO05D006362 1.4e-16 90.5 81 59.3
TWI81G0601 Tripterygium wilfordii HOM05D005079 ORTHO05D006362 1.4e-16 90.5 109 50.5
Actinidia14431 Actinidia chinensis HOM05D005079 ORTHO05D006362 1.8e-16 90.1 73 57.5
Medtr4g100980 Medicago truncatula HOM05D005079 ORTHO05D006362 1.8e-16 90.1 78 56.4
Aqoxy7G00758 Aquilegia oxysepala HOM05D005079 ORTHO05D006362 2.3e-16 89.7 77 57.1
BolC1t01100H Brassica oleracea HOM05D005079 ORTHO05D006362 2.3e-16 89.7 106 49.1
CiPaw.11G153800 Carya illinoinensis HOM05D005079 ORTHO05D006362 2.3e-16 89.7 92 51.1
AUR62044148 Chenopodium quinoa HOM05D005079 ORTHO05D006362 3.0e-16 89.4 74 55.4
Haze_07920 Corylus avellana HOM05D005079 ORTHO05D006362 3.0e-16 89.4 86 52.3
Thhalv10024535m.g Eutrema salsugineum HOM05D005079 ORTHO05D006362 3.0e-16 89.4 80 56.2
Sopen06g020790 Solanum pennellii HOM05D005079 ORTHO05D006362 3.0e-16 89.4 72 58.3
Aa31LG2G12700 Aethionema arabicum HOM05D005079 ORTHO05D006362 4.0e-16 89.0 81 56.8
DCAR_008489 Daucus carota HOM05D005079 ORTHO05D006362 4.0e-16 89.0 113 48.7
Gohir.D03G162500 Gossypium hirsutum HOM05D005079 ORTHO05D006362 4.0e-16 89.0 78 53.8
Gorai.003G171100 Gossypium raimondii HOM05D005079 ORTHO05D006362 4.0e-16 89.0 78 53.8
Cpa.g.sc29.152 Carica papaya HOM05D005079 ORTHO05D006362 6.8e-16 88.2 83 54.2
Atru.chr9.1320 Acer truncatum HOM05D005079 ORTHO05D006362 8.9e-16 87.8 77 53.2
ClCG01G004030 Citrullus lanatus HOM05D005079 ORTHO05D006362 8.9e-16 87.8 84 52.4
Hund11595 Selenicereus undatus HOM05D005079 ORTHO05D006362 8.9e-16 87.8 95 50.5
Duzib205G0133 Durio zibethinus HOM05D005079 ORTHO05D006362 1.2e-15 87.4 109 48.6
Glyma.05G059000 Glycine max HOM05D005079 ORTHO05D006362 1.2e-15 87.4 112 47.3
Gohir.A03G008400 Gossypium hirsutum HOM05D005079 ORTHO05D006362 1.5e-15 87.0 104 46.2
SalBow6G6450 Salvia bowleyana HOM05D005079 ORTHO05D006362 2.0e-15 86.7 97 45.4
AL7G38220 Arabidopsis lyrata HOM05D005079 ORTHO05D006362 2.6e-15 86.3 87 55.2
COL.COLO4_37183 Corchorus olitorius HOM05D005079 ORTHO05D006362 2.6e-15 86.3 76 53.9
RcHm_v2.0_Chr7g0203171 Rosa chinensis HOM05D005079 ORTHO05D006362 4.4e-15 85.5 86 53.5
Sabra03G0047100 Salix brachista HOM05D005079 ORTHO05D006362 4.4e-15 85.5 82 53.7
CSS0023122 Camellia sinensis var. sinensis HOM05D005079 ORTHO05D006362 5.8e-15 85.1 110 45.5
AUR62007514 Chenopodium quinoa HOM05D005079 ORTHO05D006362 5.8e-15 85.1 74 56.8
ATR0317G049 Amborella trichopoda HOM05D005079 ORTHO05D006362 7.5e-15 84.7 69 56.5
Sc01g0008470 Simmondsia chinensis HOM05D005079 ORTHO05D006362 9.8e-15 84.3 76 56.6
Ah.12g056870 Amaranthus hybridus HOM05D005079 ORTHO05D006362 1.3e-14 84.0 82 51.2
Lalb_Chr16g0386651 Lupinus albus HOM05D005079 ORTHO05D006362 1.3e-14 84.0 109 42.2
Oeu020426.1 Olea europaea HOM05D005079 ORTHO05D006362 1.3e-14 84.0 77 51.9
CSS0009127 Camellia sinensis var. sinensis HOM05D005079 ORTHO05D006362 1.7e-14 83.6 107 46.7
Sed0023601 Sechium edule HOM05D005079 ORTHO05D006362 1.7e-14 83.6 77 53.2
Ciclev10023597m.g Citrus clementina HOM05D005079 ORTHO05D006362 2.9e-14 82.8 72 55.6
VMungo0540G1603 Vigna mungo HOM05D005079 ORTHO05D006362 2.9e-14 82.8 73 54.8
PGR031G3122 Punica granatum HOM05D005079 ORTHO05D006362 3.7e-14 82.4 107 42.1
vmacro00317 Vaccinium macrocarpon HOM05D005079 ORTHO05D006362 4.9e-14 82.0 74 54.1
Phvul.006G006200 Phaseolus vulgaris HOM05D005079 ORTHO05D006362 6.4e-14 81.6 73 54.8
SGA_v2.0_scaffold120G32882 Striga asiatica HOM05D005079 ORTHO05D006362 8.3e-14 81.3 72 52.8
HPP92_008920 Vanilla planifolia HOM05D005079 ORTHO05D006362 8.3e-14 81.3 76 55.3
FvH4_5g18820 Fragaria vesca HOM05D005079 ORTHO05D006362 1.1e-13 80.9 109 44.0
FAN04G2358 Fragaria x ananassa HOM05D005079 ORTHO05D006362 1.1e-13 80.9 109 45.0
FAN08G1452 Fragaria x ananassa HOM05D005079 ORTHO05D006362 1.1e-13 80.9 109 43.1
FAN18G1282 Fragaria x ananassa HOM05D005079 ORTHO05D006362 1.1e-13 80.9 109 44.0
Rhsim02G0165500 Rhododendron simsii HOM05D005079 ORTHO05D006362 1.1e-13 80.9 68 55.9
THA.LOC104815493 Tarenaya hassleriana HOM05D005079 ORTHO05D006362 4.1e-13 79.0 78 51.3
Zm00001eb379320 Zea mays HOM05D005079 ORTHO05D006362 2.7e-12 76.3 93 47.3
unitig_744.g24463 Utricularia gibba HOM05D005079 ORTHO05D006362 7.8e-12 74.7 72 47.2
SHI11315 Sapria himalayana HOM05D005079 ORTHO05D006362 5.0e-11 72.0 92 43.5
Os06g0105500 Oryza sativa ssp. japonica HOM05D005079 ORTHO05D006362 6.6e-11 71.6 91 47.3
ECA232G1687 Erigeron canadensis HOM05D005079 ORTHO05D006362 5.6e-10 68.6 72 47.2
HPP92_028200 Vanilla planifolia HOM05D005079 ORTHO05D006362 2.1e-09 66.6 71 52.1
SMO014G0007 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 3.6e-09 65.9 55 56.4
SMO014G0029 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 3.6e-09 65.9 55 56.4
SMO304G0004 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 3.6e-09 65.9 55 56.4
AagrBONN_evm.TU.Sc2ySwM_344.1170 Anthoceros agrestis HOM05D005079 ORTHO05D006362 1.1e-08 64.3 100 41.0
Mapoly0021s0157 Marchantia polymorpha HOM05D005079 ORTHO05D006362 4.4e-07 58.9 138 31.2
Pp3c6_22100 Physcomitrium patens HOM05D005079 ORTHO05D006362 5.8e-07 58.5 83 37.3
SMO176G0009 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 3.7e-06 55.8 55 52.7
SMO365G0062 Selaginella moellendorffii HOM05D005079 ORTHO05D006362 6.4e-06 55.1 56 51.8


User provided reference genes

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