Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0796 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 1.4e-142 509.6 251 100.0
TAR365G1202 Trochodendron aralioides HOM05D007231 ORTHO05D009024 2.9e-84 315.8 241 64.7
TAR636G3122 Trochodendron aralioides HOM05D007231 ORTHO05D009024 4.9e-84 315.1 241 64.3
Actinidia00741 Actinidia chinensis HOM05D007231 ORTHO05D009024 4.6e-82 308.5 241 62.7
GSVIVG01011110001 Vitis vinifera HOM05D007231 ORTHO05D009024 4.6e-82 308.5 234 67.1
CiPaw.08G104200 Carya illinoinensis HOM05D007231 ORTHO05D009024 7.4e-80 301.2 241 60.2
Nn1g02166 Nelumbo nucifera HOM05D007231 ORTHO05D009024 1.3e-79 300.4 240 64.2
Aqoxy2G03271 Aquilegia oxysepala HOM05D007231 ORTHO05D009024 2.1e-79 299.7 235 64.7
Dinv32951 Davidia involucrata HOM05D007231 ORTHO05D009024 3.7e-79 298.9 242 62.0
Actinidia09146 Actinidia chinensis HOM05D007231 ORTHO05D009024 4.8e-79 298.5 241 61.4
MSTRG.18222 Avicennia marina HOM05D007231 ORTHO05D009024 1.1e-78 297.4 239 62.8
MBI19_g24716_MAGBIO Magnolia biondii HOM05D007231 ORTHO05D009024 4.0e-78 295.4 238 64.3
Thecc.01G282400 Theobroma cacao HOM05D007231 ORTHO05D009024 4.5e-77 292.0 242 59.5
PSO210G0158 Papaver somniferum HOM05D007231 ORTHO05D009024 5.8e-77 291.6 242 61.2
Dinv11248 Davidia involucrata HOM05D007231 ORTHO05D009024 7.6e-77 291.2 242 61.2
Duzib211G0396 Durio zibethinus HOM05D007231 ORTHO05D009024 1.7e-76 290.0 242 59.1
vmacro02556 Vaccinium macrocarpon HOM05D007231 ORTHO05D009024 3.8e-76 288.9 240 61.2
Cfa006118 Carpinus fangiana HOM05D007231 ORTHO05D009024 1.4e-75 287.0 246 57.3
Atru.chr5.1389 Acer truncatum HOM05D007231 ORTHO05D009024 1.9e-75 286.6 242 60.3
Rhsim13G0023500 Rhododendron simsii HOM05D007231 ORTHO05D009024 2.5e-75 286.2 229 61.6
Nitab4.5_0001028g0140 Nicotiana tabacum HOM05D007231 ORTHO05D009024 3.2e-75 285.8 240 60.8
CANSAT25G1925 Cannabis sativa HOM05D007231 ORTHO05D009024 4.2e-75 285.4 241 59.3
Manes.05G074400 Manihot esculenta HOM05D007231 ORTHO05D009024 5.5e-75 285.0 236 60.6
QL12p022281 Quercus lobata HOM05D007231 ORTHO05D009024 5.5e-75 285.0 228 60.5
Cc01_g19680 Coffea canephora HOM05D007231 ORTHO05D009024 9.3e-75 284.3 242 58.7
CAN.G609.11 Capsicum annuum HOM05D007231 ORTHO05D009024 1.2e-74 283.9 239 60.3
Gohir.D08G077400 Gossypium hirsutum HOM05D007231 ORTHO05D009024 1.2e-74 283.9 242 58.7
Prupe.8G243400 Prunus persica HOM05D007231 ORTHO05D009024 1.2e-74 283.9 239 59.8
Gorai.004G082300 Gossypium raimondii HOM05D007231 ORTHO05D009024 2.7e-74 282.7 242 58.7
Peaxi162Scf00570g00058 Petunia axillaris HOM05D007231 ORTHO05D009024 2.7e-74 282.7 239 58.6
Oeu015959.1 Olea europaea HOM05D007231 ORTHO05D009024 3.5e-74 282.3 224 62.5
Oeu022878.1 Olea europaea HOM05D007231 ORTHO05D009024 4.6e-74 282.0 223 61.0
Solyc09g064930.3 Solanum lycopersicum HOM05D007231 ORTHO05D009024 1.3e-73 280.4 239 60.3
COL.COLO4_09128 Corchorus olitorius HOM05D007231 ORTHO05D009024 1.8e-73 280.0 234 60.3
Sopen09g026640 Solanum pennellii HOM05D007231 ORTHO05D009024 2.3e-73 279.6 239 59.8
Gohir.A08G069100 Gossypium hirsutum HOM05D007231 ORTHO05D009024 3.0e-73 279.3 242 57.9
MD11G1288600 Malus domestica HOM05D007231 ORTHO05D009024 3.9e-73 278.9 241 58.5
Nitab4.5_0002386g0100 Nicotiana tabacum HOM05D002055 ORTHO05D009024 6.7e-73 278.1 244 59.0
SalBow4G2275 Salvia bowleyana HOM05D007231 ORTHO05D009024 8.7e-73 277.7 225 60.0
RcHm_v2.0_Chr6g0291381 Rosa chinensis HOM05D007231 ORTHO05D009024 1.9e-72 276.6 241 58.1
THA.LOC104801225 Tarenaya hassleriana HOM05D007231 ORTHO05D009024 9.6e-72 274.2 240 57.9
Cpa.g.sc64.168 Carica papaya HOM05D007231 ORTHO05D009024 1.6e-71 273.5 240 57.5
Potri.019G046400 Populus trichocarpa HOM05D007231 ORTHO05D009024 3.7e-71 272.3 225 61.3
Ciclev10021857m.g Citrus clementina HOM05D007231 ORTHO05D009024 4.8e-71 271.9 243 57.6
Sabra19G0055900 Salix brachista HOM05D007231 ORTHO05D009024 1.1e-70 270.8 225 60.9
Eucgr.K03384 Eucalyptus grandis HOM05D007231 ORTHO05D009024 1.4e-70 270.4 244 57.8
FvH4_2g23810 Fragaria vesca HOM05D007231 ORTHO05D009024 1.4e-70 270.4 242 58.7
arahy.Tifrunner.gnm1.ann1.9UA39Y Arachis hypogaea HOM05D007231 ORTHO05D009024 3.1e-70 269.2 244 57.8
arahy.Tifrunner.gnm1.ann1.LJDI86 Arachis hypogaea HOM05D007231 ORTHO05D009024 3.1e-70 269.2 244 57.8
Os11g0147100 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 3.1e-70 269.2 243 54.3
Lj5g0005680 Lotus japonicus HOM05D007231 ORTHO05D009024 5.3e-70 268.5 234 59.0
Glyma.10G025400 Glycine max HOM05D007231 ORTHO05D009024 2.6e-69 266.2 234 57.7
Lalb_Chr02g0142831 Lupinus albus HOM05D007231 ORTHO05D009024 3.4e-69 265.8 234 57.7
Lsat_1_v5_gn_5_190100 Lactuca sativa HOM05D007231 ORTHO05D009024 7.6e-69 264.6 238 57.1
Lj2C1175G18 Lonicera japonica HOM05D007231 ORTHO05D009024 7.6e-69 264.6 299 49.5
Lalb_Chr06g0163091 Lupinus albus HOM05D007231 ORTHO05D009024 7.6e-69 264.6 233 56.2
FAN27G1680 Fragaria x ananassa HOM05D007231 ORTHO05D009024 1.0e-68 264.2 249 57.0
HanXRQChr01g0002311 Helianthus annuus HOM05D007231 ORTHO05D009024 2.2e-68 263.1 242 56.2
Aa31LG1G9290 Aethionema arabicum HOM05D007231 ORTHO05D009024 2.9e-68 262.7 233 57.9
Phvul.007G170300 Phaseolus vulgaris HOM05D007231 ORTHO05D009024 2.9e-68 262.7 240 58.3
BcaC05g24637 Brassica carinata HOM05D007231 ORTHO05D009024 3.8e-68 262.3 241 55.2
Os12g0144000 Oryza sativa ssp. japonica HOM05D007231 ORTHO05D009024 3.8e-68 262.3 244 52.9
AT1G03250 Arabidopsis thaliana HOM05D007231 ORTHO05D009024 5.0e-68 261.9 233 57.9
A10p01800 Brassica napus HOM05D007231 ORTHO05D009024 8.4e-68 261.2 241 54.8
Zm00001eb342980 Zea mays HOM05D007231 ORTHO05D009024 8.4e-68 261.2 239 54.4
ATR0626G005 Amborella trichopoda HOM05D007231 ORTHO05D009024 1.1e-67 260.8 199 58.8
HanXRQChr11g0327631 Helianthus annuus HOM05D007231 ORTHO05D009024 1.4e-67 260.4 235 56.2
VMungo0720G1677 Vigna mungo HOM05D002055 ORTHO05D002120 1.9e-67 260.0 225 59.6
AL1G12740 Arabidopsis lyrata HOM05D007231 ORTHO05D009024 2.5e-67 259.6 233 57.1
CARHR002550 Cardamine hirsuta HOM05D007231 ORTHO05D009024 3.2e-67 259.2 241 56.0
BraA10t42455Z Brassica rapa HOM05D007231 ORTHO05D009024 4.2e-67 258.8 241 54.8
Migut.D00275 Erythranthe guttata HOM05D007231 ORTHO05D009024 5.5e-67 258.5 240 54.6
TWI14G0923 Tripterygium wilfordii HOM05D002055 ORTHO05D002120 9.3e-67 257.7 190 63.2
Zm00001eb196600 Zea mays HOM05D007231 ORTHO05D009024 9.3e-67 257.7 243 52.3
MELO3C015851.2 Cucumis melo HOM05D007231 ORTHO05D009024 1.6e-66 256.9 239 54.4
Ca_09766_v3 Cicer arietinum L. HOM05D002055 ORTHO05D002120 2.1e-66 256.5 233 56.7
Thhalv10008549m.g Eutrema salsugineum HOM05D007231 ORTHO05D009024 2.1e-66 256.5 244 54.9
BcaC05g24551 Brassica carinata HOM05D007231 ORTHO05D009024 2.7e-66 256.1 238 55.5
C05p01780 Brassica napus HOM05D007231 ORTHO05D009024 4.6e-66 255.4 223 58.3
Carub.0001s0236 Capsella rubella HOM05D007231 ORTHO05D009024 4.6e-66 255.4 233 55.8
CsaV3_7G028660 Cucumis sativus L. HOM05D007231 ORTHO05D009024 7.9e-66 254.6 221 56.6
Sp1g02240 Schrenkiella parvula HOM05D007231 ORTHO05D009024 7.9e-66 254.6 239 55.2
SGA_v2.0_scaffold11G05804 Striga asiatica HOM05D002055 ORTHO05D002120 3.0e-65 252.7 249 53.8
SGA_v2.0_scaffold1G00456 Striga asiatica HOM05D007231 ORTHO05D009024 3.0e-65 252.7 206 62.6
BolC5t28956H Brassica oleracea HOM05D007231 ORTHO05D009024 3.9e-65 252.3 248 53.2
Psat6g125920 Pisum sativum HOM05D007231 ORTHO05D009024 3.9e-65 252.3 234 55.6
ECA248G0248 Erigeron canadensis HOM05D002055 ORTHO05D002120 6.7e-65 251.5 229 55.9
Sed0024964 Sechium edule HOM05D002055 ORTHO05D002120 6.7e-65 251.5 204 58.3
Hund05352 Selenicereus undatus HOM05D007231 ORTHO05D009024 1.3e-63 247.3 224 57.1
Medtr1g072510 Medicago truncatula HOM05D007231 ORTHO05D009024 2.8e-63 246.1 234 55.1
FAN20G2044 Fragaria x ananassa HOM05D007231 ORTHO05D009024 3.7e-63 245.7 290 47.9
AUR62036799 Chenopodium quinoa HOM05D007231 ORTHO05D009024 4.5e-61 238.8 261 48.7
EL10Ac7g17220 Beta vulgaris HOM05D007231 ORTHO05D009024 7.7e-61 238.0 293 45.1
unitig_0.g109 Utricularia gibba HOM05D007231 ORTHO05D009024 1.1e-59 234.2 209 52.6
CSS0040014 Camellia sinensis var. sinensis HOM05D007231 ORTHO05D009024 5.5e-59 231.9 190 58.9
HPP92_016066 Vanilla planifolia HOM05D006695 ORTHO05D008239 7.9e-58 228.0 191 58.1
Duzib138G1636 Durio zibethinus HOM05D007231 ORTHO05D009024 5.1e-57 225.3 241 50.6
ClCG09G006940 Citrullus lanatus HOM05D002055 ORTHO05D002120 2.0e-56 223.4 173 60.1
PGR044G2216 Punica granatum HOM05D007231 ORTHO05D009024 1.8e-54 216.9 185 58.9
Ciclev10022442m.g Citrus clementina HOM05D007231 ORTHO05D009024 1.7e-52 210.3 185 55.7
AUR62039907 Chenopodium quinoa HOM05D007231 ORTHO05D009024 6.1e-50 201.8 152 57.9
Sc05g0004910 Simmondsia chinensis HOM05D007231 ORTHO05D009024 1.8e-49 200.3 159 61.6
SEGI_15193 Sequoiadendron giganteum HOM05D007231 ORTHO05D009024 2.8e-39 166.4 217 39.6
CDE02G1070 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 5.3e-38 162.2 130 68.5
CDE02G2493 Ceratophyllum demersum HOM05D007231 ORTHO05D009024 3.4e-32 142.9 77 92.2
Mapoly0057s0044 Marchantia polymorpha HOM05D007231 ORTHO05D009024 1.4e-30 137.5 176 42.0
SMO137G0298 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 7.5e-24 115.2 167 41.9
SMO170G0043 Selaginella moellendorffii HOM05D007231 ORTHO05D009024 1.7e-23 114.0 167 41.3
TPR.G19967 Trifolium pratense HOM05D007231 ORTHO05D009024 1.8e-22 110.5 119 49.6
Pp3c4_28170 Physcomitrium patens HOM05D007231 ORTHO05D009024 1.6e-21 107.5 213 34.7
AagrBONN_evm.TU.Sc2ySwM_117.667 Anthoceros agrestis HOM05D007231 ORTHO05D009024 8.6e-20 101.7 209 29.2
MCO13G326 Micromonas commoda HOM05D007231 ORTHO05D009024 5.2e-17 92.4 216 29.6
Cre01.g040100 Chlamydomonas reinhardtii HOM05D007231 ORTHO05D009024 8.3e-15 85.1 189 30.2
BcaC05g24635 Brassica carinata HOM05D007231 ORTHO05D009024 5.9e-13 79.0 78 53.8
TPR.G24733 Trifolium pratense HOM05D007231 ORTHO05D009024 1.3e-12 77.8 57 70.2
Cc01_g19320 Coffea canephora HOM05D007231 ORTHO05D009024 1.2e-08 64.7 135 34.1


User provided reference genes

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