Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0756 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 8.1e-91 337.0 167 100.0
CDE02G0900 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 4.5e-33 145.2 179 51.4
CSS0028139 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 6.3e-19 98.2 87 55.2
MBI06_g19633_MAGBIO Magnolia biondii HOM05D006640 ORTHO05D008078 8.2e-19 97.8 127 45.7
GSVIVG01013394001 Vitis vinifera HOM05D006640 ORTHO05D008078 1.8e-18 96.7 110 46.4
Cpa.g.sc26.165 Carica papaya HOM05D006640 ORTHO05D008078 3.1e-18 95.9 94 53.2
Sabra05G0196400 Salix brachista HOM05D006640 ORTHO05D008078 3.1e-18 95.9 130 42.3
Hma1.2p1_0612F.1_g188900 Hydrangea macrophylla HOM05D006640 ORTHO05D008078 7.0e-18 94.7 110 46.4
Peaxi162Scf00680g00119 Petunia axillaris HOM05D006640 ORTHO05D008078 7.0e-18 94.7 164 36.6
Nn5g31001 Nelumbo nucifera HOM05D006640 ORTHO05D008078 2.6e-17 92.8 101 48.5
vmacro05542 Vaccinium macrocarpon HOM05D006640 ORTHO05D008078 5.9e-17 91.7 114 42.1
Ciclev10002549m.g Citrus clementina HOM05D006640 ORTHO05D008078 1.3e-16 90.5 173 33.5
Prupe.5G009200 Prunus persica HOM05D006640 ORTHO05D008078 1.3e-16 90.5 171 35.7
TAR625G0363 Trochodendron aralioides HOM05D006640 ORTHO05D008078 1.3e-16 90.5 170 34.1
CiPaw.07G136100 Carya illinoinensis HOM05D006640 ORTHO05D008078 1.7e-16 90.1 110 42.7
QL02p015123 Quercus lobata HOM05D006640 ORTHO05D008078 1.7e-16 90.1 166 34.9
Haze_19181 Corylus avellana HOM05D006640 ORTHO05D008078 2.2e-16 89.7 106 43.4
Eucgr.F01788 Eucalyptus grandis HOM05D006640 ORTHO05D008078 2.9e-16 89.4 119 43.7
Nitab4.5_0000383g0410 Nicotiana tabacum HOM05D006640 ORTHO05D008078 5.0e-16 88.6 110 42.7
Cfa010319 Carpinus fangiana HOM05D006640 ORTHO05D008078 6.5e-16 88.2 107 43.0
Cfa020797 Carpinus fangiana HOM05D006640 ORTHO05D008078 6.5e-16 88.2 107 42.1
RcHm_v2.0_Chr3g0481381 Rosa chinensis HOM05D006640 ORTHO05D008078 6.5e-16 88.2 78 51.3
CAN.G1138.9 Capsicum annuum HOM05D006640 ORTHO05D008078 8.5e-16 87.8 111 40.5
Sc24g0000300 Simmondsia chinensis HOM05D006640 ORTHO05D008078 8.5e-16 87.8 114 41.2
RcHm_v2.0_Chr7g0215911 Rosa chinensis HOM05D006640 ORTHO05D008078 1.1e-15 87.4 130 36.2
SalBow1G3286 Salvia bowleyana HOM05D006640 ORTHO05D008078 2.5e-15 86.3 120 41.7
SalBow7G4342 Salvia bowleyana HOM05D006640 ORTHO05D008078 2.5e-15 86.3 120 41.7
ATR0807G089 Amborella trichopoda HOM05D006640 ORTHO05D008078 3.2e-15 85.9 177 33.9
PSO541G3394 Papaver somniferum HOM05D006640 ORTHO05D008078 4.2e-15 85.5 169 33.1
FvH4_5g25620 Fragaria vesca HOM05D006640 ORTHO05D008078 5.5e-15 85.1 110 38.2
FAN18G3620 Fragaria x ananassa HOM05D006640 ORTHO05D008078 5.5e-15 85.1 110 38.2
Manes.13G069100 Manihot esculenta HOM05D006640 ORTHO05D008078 5.5e-15 85.1 106 42.5
Oeu011315.3 Olea europaea HOM05D006640 ORTHO05D008078 5.5e-15 85.1 108 39.8
Solyc04g082560.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 5.5e-15 85.1 167 32.3
Solyc08g069130.1 Solanum lycopersicum HOM05D006640 ORTHO05D008078 5.5e-15 85.1 167 32.3
Sopen04g036190 Solanum pennellii HOM05D006640 ORTHO05D008078 5.5e-15 85.1 167 31.7
EL10Ac3g05131 Beta vulgaris HOM05D006640 ORTHO05D008078 9.4e-15 84.3 170 34.7
TPR.G34155 Trifolium pratense HOM05D006640 ORTHO05D008078 9.4e-15 84.3 171 35.1
Atru.chr3.582 Acer truncatum HOM05D006640 ORTHO05D008078 1.2e-14 84.0 106 41.5
FAN08G2005 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.2e-14 84.0 113 36.3
Lalb_Chr01g0007731 Lupinus albus HOM05D006640 ORTHO05D008078 1.2e-14 84.0 104 42.3
CANSAT54G1336 Cannabis sativa HOM05D006640 ORTHO05D008078 1.6e-14 83.6 105 40.0
FAN04G1358 Fragaria x ananassa HOM05D006640 ORTHO05D008078 1.6e-14 83.6 110 38.2
Aqoxy6G01598 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 3.6e-14 82.4 166 33.1
PSO675G3428 Papaver somniferum HOM05D006640 ORTHO05D008078 3.6e-14 82.4 169 32.0
Cc10_g14910 Coffea canephora HOM05D006640 ORTHO05D008078 4.7e-14 82.0 167 33.5
MD15G1440200 Malus domestica HOM05D006640 ORTHO05D008078 4.7e-14 82.0 111 40.5
Medtr4g032370 Medicago truncatula HOM05D006640 ORTHO05D008078 4.7e-14 82.0 167 32.3
Glyma.08G337600 Glycine max HOM05D003402 ORTHO05D003939 6.1e-14 81.6 120 38.3
Psat7g226480 Pisum sativum HOM05D006640 ORTHO05D008078 6.1e-14 81.6 171 32.7
Lj6g0027905 Lotus japonicus HOM05D006640 ORTHO05D008078 8.0e-14 81.3 120 39.2
Medtr1g103240 Medicago truncatula HOM05D006640 ORTHO05D008078 1.0e-13 80.9 120 40.8
Migut.E01492 Erythranthe guttata HOM05D006640 ORTHO05D008078 1.4e-13 80.5 120 40.8
Sed0007887 Sechium edule HOM05D006640 ORTHO05D008078 1.4e-13 80.5 139 38.1
COL.COLO4_22727 Corchorus olitorius HOM05D006640 ORTHO05D008078 1.8e-13 80.1 166 30.7
SalBow6G0872 Salvia bowleyana HOM05D006640 ORTHO05D008078 1.8e-13 80.1 108 40.7
Nitab4.5_0001208g0130 Nicotiana tabacum HOM05D006640 ORTHO05D008078 2.3e-13 79.7 102 42.2
Potri.005G253200 Populus trichocarpa HOM05D006640 ORTHO05D008078 3.0e-13 79.3 168 32.7
Ca_19713_v3 Cicer arietinum L. HOM05D006640 ORTHO05D008078 5.2e-13 78.6 104 38.5
Os10g0566900 Oryza sativa ssp. japonica HOM05D006640 ORTHO05D008078 5.2e-13 78.6 163 33.1
DCAR_013930 Daucus carota HOM05D006640 ORTHO05D008078 6.7e-13 78.2 121 38.0
Phvul.006G070300 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 6.7e-13 78.2 117 37.6
MSTRG.990 Avicennia marina HOM05D006640 ORTHO05D008078 1.2e-12 77.4 120 40.0
Rhsim08G0078300 Rhododendron simsii HOM05D006640 ORTHO05D008078 1.5e-12 77.0 167 32.3
Glyma.08G337400 Glycine max HOM05D001876 ORTHO05D002002 2.0e-12 76.6 133 35.3
Lsat_1_v5_gn_0_27580 Lactuca sativa HOM05D006640 ORTHO05D008078 2.0e-12 76.6 158 34.2
VMungo0540G0999 Vigna mungo HOM05D006640 ORTHO05D008078 2.0e-12 76.6 107 38.3
Thecc.03G029100 Theobroma cacao HOM05D006640 ORTHO05D008078 2.6e-12 76.3 110 38.2
SGA_v2.0_scaffold184G39969 Striga asiatica HOM05D006640 ORTHO05D008078 3.3e-12 75.9 166 29.5
Duzib205G0266 Durio zibethinus HOM05D006640 ORTHO05D008078 4.4e-12 75.5 169 31.4
ClCG02G003390 Citrullus lanatus HOM05D006640 ORTHO05D008078 9.7e-12 74.3 173 32.4
Phvul.008G111000 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 2.2e-11 73.2 114 36.0
MELO3C013247.2 Cucumis melo HOM05D006640 ORTHO05D008078 2.8e-11 72.8 173 32.4
CSS0036253 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 3.7e-11 72.4 110 39.1
Hund21079 Selenicereus undatus HOM05D006640 ORTHO05D008078 3.7e-11 72.4 110 38.2
Sp2g08620 Schrenkiella parvula HOM05D006218 ORTHO05D007338 6.3e-11 71.6 98 38.8
Nitab4.5_0010095g0020 Nicotiana tabacum HOM05D006640 ORTHO05D008078 8.2e-11 71.2 87 44.8
Gorai.006G062900 Gossypium raimondii HOM05D006640 ORTHO05D008078 1.1e-10 70.9 114 36.0
AUR62005948 Chenopodium quinoa HOM05D006640 ORTHO05D008078 1.4e-10 70.5 169 33.7
CsaV3_7G001930 Cucumis sativus L. HOM05D006640 ORTHO05D008078 1.8e-10 70.1 130 34.6
CSS0000785 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 4.1e-10 68.9 126 34.9
CSS0011114 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 4.1e-10 68.9 66 51.5
THA.LOC104820569 Tarenaya hassleriana HOM05D006640 ORTHO05D008078 5.3e-10 68.6 119 36.1
Duzib205G1379 Durio zibethinus HOM05D006640 ORTHO05D008078 7.0e-10 68.2 99 37.4
Atru.chr3.42 Acer truncatum HOM05D006640 ORTHO05D008078 1.2e-09 67.4 61 49.2
Mapoly0033s0101 Marchantia polymorpha HOM05D006640 ORTHO05D008078 1.6e-09 67.0 129 31.0
Dinv27390 Davidia involucrata HOM05D006640 ORTHO05D008078 3.5e-09 65.9 82 45.1
FAN13G1910 Fragaria x ananassa HOM05D006640 ORTHO05D008078 3.5e-09 65.9 66 42.4
Lj4C809G7 Lonicera japonica HOM05D006640 ORTHO05D008078 3.5e-09 65.9 66 47.0
Aa31LG9G12490 Aethionema arabicum HOM05D006640 ORTHO05D008078 5.9e-09 65.1 113 34.5
Gohir.A09G046800 Gossypium hirsutum HOM05D006640 ORTHO05D008078 5.9e-09 65.1 114 34.2
PGR083G0938 Punica granatum HOM05D006640 ORTHO05D008078 5.9e-09 65.1 170 29.4
Peaxi162Scf00139g00094 Petunia axillaris HOM05D006640 ORTHO05D008078 7.7e-09 64.7 87 41.4
AL8G16350 Arabidopsis lyrata HOM05D006640 ORTHO05D008078 1.0e-08 64.3 118 31.4
CARHR179670 Cardamine hirsuta HOM05D006640 ORTHO05D008078 1.0e-08 64.3 126 32.5
AT5G43822 Arabidopsis thaliana HOM05D006640 ORTHO05D008078 1.7e-08 63.5 118 32.2
HanXRQChr02g0057271 Helianthus annuus HOM05D006640 ORTHO05D008078 1.7e-08 63.5 85 38.8
AUR62028117 Chenopodium quinoa HOM05D006640 ORTHO05D008078 2.2e-08 63.2 88 42.0
Thhalv10003275m.g Eutrema salsugineum HOM05D006640 ORTHO05D008078 2.2e-08 63.2 117 31.6
MD08G1245100 Malus domestica HOM05D006640 ORTHO05D008078 2.9e-08 62.8 83 42.2
ECA232G3411 Erigeron canadensis HOM05D006640 ORTHO05D008078 6.5e-08 61.6 96 38.5
Carub.0008s0481 Capsella rubella HOM05D006640 ORTHO05D008078 8.5e-08 61.2 124 29.8
Lsat_1_v5_gn_9_28760 Lactuca sativa HOM05D006640 ORTHO05D008078 8.5e-08 61.2 86 36.0
HPP92_007449 Vanilla planifolia HOM05D006640 ORTHO05D008078 8.5e-08 61.2 98 33.7
HanXRQChr05g0147651 Helianthus annuus HOM05D006640 ORTHO05D008078 2.5e-07 59.7 96 36.5
Pp3c20_21140 Physcomitrium patens HOM05D000227 ORTHO05D008078 2.5e-07 59.7 114 33.3
Gohir.D09G047201 Gossypium hirsutum HOM05D006640 ORTHO05D008078 7.2e-07 58.2 86 36.0
BcaC06g31675 Brassica carinata HOM05D006640 ORTHO05D008078 4.7e-06 55.5 102 31.4


User provided reference genes

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