Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0753 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 7.5e-178 627.1 320 100.0
CDE06G1226 Ceratophyllum demersum HOM05D004925 ORTHO05D005643 1.7e-134 483.0 320 81.2
Nn2g15712 Nelumbo nucifera HOM05D004925 ORTHO05D005643 4.1e-51 206.1 321 45.8
MBI19_g23208_MAGBIO Magnolia biondii HOM05D004925 ORTHO05D005643 5.9e-50 202.2 343 43.1
TAR369G0809 Trochodendron aralioides HOM05D004925 ORTHO05D005643 1.3e-44 184.5 311 42.4
TAR623G0394 Trochodendron aralioides HOM05D004925 ORTHO05D005643 8.3e-44 181.8 278 43.9
CiPaw.13G000800 Carya illinoinensis HOM05D004925 ORTHO05D005643 3.6e-39 166.4 263 42.6
Dinv43491 Davidia involucrata HOM05D004925 ORTHO05D005643 1.8e-38 164.1 321 40.2
Dinv43931 Davidia involucrata HOM05D004925 ORTHO05D005643 6.8e-38 162.2 316 39.6
GSVIVG01001367001 Vitis vinifera HOM05D004925 ORTHO05D005643 3.2e-35 153.3 284 40.1
Aqoxy1G00133 Aquilegia oxysepala HOM05D004925 ORTHO05D005643 9.2e-35 151.8 264 42.0
Thecc.01G416300 Theobroma cacao HOM05D004925 ORTHO05D005643 7.8e-34 148.7 170 49.4
Hma1.2p1_0860F.1_g229570 Hydrangea macrophylla HOM05D004925 ORTHO05D005643 1.0e-33 148.3 310 39.0
MSTRG.5000 Avicennia marina HOM05D004925 ORTHO05D005643 1.3e-33 147.9 313 39.0
Manes.10G151100 Manihot esculenta HOM05D004925 ORTHO05D005643 1.3e-33 147.9 184 46.2
COL.COLO4_25137 Corchorus olitorius HOM05D004925 ORTHO05D005643 3.9e-33 146.4 170 48.2
Peaxi162Scf00878g00036 Petunia axillaris HOM05D004925 ORTHO05D005643 6.6e-33 145.6 304 38.5
CAN.G261.6 Capsicum annuum HOM05D004925 ORTHO05D005643 1.5e-32 144.4 207 48.3
Cfa004806 Carpinus fangiana HOM05D004925 ORTHO05D005643 7.3e-32 142.1 309 36.9
Rhsim01G0134400 Rhododendron simsii HOM05D004925 ORTHO05D005643 7.3e-32 142.1 306 40.2
SalBow4G1354 Salvia bowleyana HOM05D004925 ORTHO05D005643 1.6e-31 141.0 287 38.7
SalBow4G3044 Salvia bowleyana HOM05D004925 ORTHO05D005643 2.8e-31 140.2 289 39.1
RcHm_v2.0_Chr1g0313411 Rosa chinensis HOM05D004925 ORTHO05D005643 6.2e-31 139.0 228 42.1
CsaV3_3G032460 Cucumis sativus L. HOM05D004925 ORTHO05D005643 8.1e-31 138.7 314 38.5
CANSAT11G0505 Cannabis sativa HOM05D004925 ORTHO05D005643 1.4e-30 137.9 194 44.3
Haze_10419 Corylus avellana HOM05D006965 ORTHO05D008652 1.8e-30 137.5 147 52.4
Haze_10424 Corylus avellana HOM05D006965 ORTHO05D008652 1.8e-30 137.5 147 52.4
Gohir.D08G037401 Gossypium hirsutum HOM05D004925 ORTHO05D005643 1.8e-30 137.5 177 45.2
Oeu053533.1 Olea europaea HOM05D004925 ORTHO05D005643 3.1e-30 136.7 319 36.7
SGA_v2.0_scaffold95G28775 Striga asiatica HOM05D004925 ORTHO05D005643 3.1e-30 136.7 301 36.9
Potri.001G229800 Populus trichocarpa HOM05D004925 ORTHO05D005643 4.0e-30 136.3 184 46.7
FAN03G1097 Fragaria x ananassa HOM05D004925 ORTHO05D005643 5.2e-30 136.0 159 50.3
MD02G1318600 Malus domestica HOM05D004925 ORTHO05D005643 5.2e-30 136.0 305 37.0
PSO384G4128 Papaver somniferum HOM05D004925 ORTHO05D005643 6.8e-30 135.6 275 38.9
Gohir.A08G026720 Gossypium hirsutum HOM05D004925 ORTHO05D005643 8.9e-30 135.2 176 46.6
MD07G1002600 Malus domestica HOM05D004925 ORTHO05D005643 8.9e-30 135.2 315 35.9
Hund25510 Selenicereus undatus HOM05D004925 ORTHO05D005643 8.9e-30 135.2 316 36.7
FvH4_7g00160 Fragaria vesca HOM05D004925 ORTHO05D005643 1.5e-29 134.4 159 49.7
FAN06G2494 Fragaria x ananassa HOM05D004925 ORTHO05D005643 1.5e-29 134.4 159 49.7
FAN10G2396 Fragaria x ananassa HOM05D004925 ORTHO05D005643 1.5e-29 134.4 159 49.7
Gorai.004G035400 Gossypium raimondii HOM05D004925 ORTHO05D005643 2.0e-29 134.0 178 44.9
ClCG10G012660 Citrullus lanatus HOM05D004925 ORTHO05D005643 3.4e-29 133.3 321 36.4
FAN01G0312 Fragaria x ananassa HOM05D004925 ORTHO05D005643 7.5e-29 132.1 165 49.7
FAN01G2076 Fragaria x ananassa HOM05D004925 ORTHO05D005643 7.5e-29 132.1 267 39.0
Sc17g0006850 Simmondsia chinensis HOM05D004925 ORTHO05D005643 7.5e-29 132.1 177 44.1
TWI09G1281 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 9.9e-29 131.7 275 37.8
Cc02_g27070 Coffea canephora HOM05D004925 ORTHO05D005643 2.2e-28 130.6 186 48.9
HanXRQChr01g0018661 Helianthus annuus HOM05D004925 ORTHO05D005643 2.2e-28 130.6 255 38.0
Solyc01g073920.3 Solanum lycopersicum HOM05D004925 ORTHO05D005643 2.2e-28 130.6 318 36.5
Sed0003173 Sechium edule HOM05D004925 ORTHO05D005643 3.7e-28 129.8 175 45.7
Duzib114G0283 Durio zibethinus HOM05D004925 ORTHO05D005643 1.9e-27 127.5 178 43.8
Phvul.005G039900 Phaseolus vulgaris HOM05D004925 ORTHO05D005643 1.9e-27 127.5 289 38.4
AT2G32840 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 2.4e-27 127.1 315 36.2
Atru.chr11.2695 Acer truncatum HOM05D004925 ORTHO05D005643 3.2e-27 126.7 287 37.6
Sopen01g033490 Solanum pennellii HOM05D004925 ORTHO05D005643 3.2e-27 126.7 327 35.2
Migut.N01664 Erythranthe guttata HOM05D004925 ORTHO05D005643 4.1e-27 126.3 254 39.8
Lalb_Chr03g0033881 Lupinus albus HOM05D004925 ORTHO05D005643 5.4e-27 125.9 170 45.3
QL04p000066 Quercus lobata HOM05D004925 ORTHO05D005643 5.4e-27 125.9 306 35.6
TWI73G1095 Tripterygium wilfordii HOM05D004925 ORTHO05D005643 5.4e-27 125.9 268 39.2
arahy.Tifrunner.gnm1.ann1.WEBP2W Arachis hypogaea HOM05D004925 ORTHO05D005643 7.1e-27 125.6 160 46.2
ECA248G0029 Erigeron canadensis HOM05D004925 ORTHO05D005643 7.1e-27 125.6 238 40.8
Lsat_1_v5_gn_1_110881 Lactuca sativa HOM05D004925 ORTHO05D005643 7.1e-27 125.6 234 41.5
vmacro12585 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 7.1e-27 125.6 352 33.8
Glyma.15G269200 Glycine max HOM05D004925 ORTHO05D005643 9.2e-27 125.2 234 41.5
Eucgr.G03409 Eucalyptus grandis HOM05D004925 ORTHO05D005643 1.2e-26 124.8 239 41.0
HanXRQChr11g0341651 Helianthus annuus HOM05D004925 ORTHO05D005643 1.6e-26 124.4 205 42.4
Nitab4.5_0000892g0140 Nicotiana tabacum HOM05D004925 ORTHO05D005643 2.3e-25 120.6 351 33.3
HanXRQChr11g0341641 Helianthus annuus HOM05D004925 ORTHO05D005643 3.0e-25 120.2 208 40.9
AL4G28340 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 3.9e-25 119.8 273 37.7
PSO339G6120 Papaver somniferum HOM05D004925 ORTHO05D005643 6.6e-25 119.0 267 35.6
arahy.Tifrunner.gnm1.ann1.BFX48A Arachis hypogaea HOM05D004925 ORTHO05D005643 1.5e-24 117.9 159 43.4
QL04p003160 Quercus lobata HOM05D004925 ORTHO05D005643 1.5e-24 117.9 351 31.9
THA.LOC104801020 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 1.5e-24 117.9 289 37.7
Carub.0004s1427 Capsella rubella HOM05D004925 ORTHO05D005643 1.9e-24 117.5 271 36.2
MELO3C030929.2 Cucumis melo HOM05D004925 ORTHO05D005643 2.5e-24 117.1 377 34.5
Glyma.08G148900 Glycine max HOM05D004925 ORTHO05D005643 3.3e-24 116.7 299 36.1
ATR0598G164 Amborella trichopoda HOM05D004925 ORTHO05D005643 4.3e-24 116.3 303 34.3
Medtr2g060910 Medicago truncatula HOM05D004925 ORTHO05D005643 9.5e-24 115.2 146 46.6
Actinidia21578 Actinidia chinensis HOM05D004925 ORTHO05D005643 2.8e-23 113.6 190 44.2
Ca_02951_v3 Cicer arietinum L. HOM05D004925 ORTHO05D005643 2.8e-23 113.6 146 45.9
HanXRQChr11g0341871 Helianthus annuus HOM05D004925 ORTHO05D005643 2.8e-23 113.6 139 50.4
Cpa.g.sc189.17 Carica papaya HOM05D004925 ORTHO05D005643 3.6e-23 113.2 152 46.7
Actinidia15855 Actinidia chinensis HOM05D004925 ORTHO05D005643 8.1e-23 112.1 298 34.6
Oeu024926.1 Olea europaea HOM05D004925 ORTHO05D005643 1.1e-22 111.7 393 30.0
CARHR126790 Cardamine hirsuta HOM05D004925 ORTHO05D005643 1.8e-22 110.9 306 32.4
Medtr4g125960 Medicago truncatula HOM05D004925 ORTHO05D005643 4.0e-22 109.8 269 34.9
Sp4g15220 Schrenkiella parvula HOM05D004925 ORTHO05D005643 5.2e-22 109.4 323 32.5
Zm00001eb399260 Zea mays HOM05D004925 ORTHO05D005643 5.2e-22 109.4 308 32.8
BcaB02g10501 Brassica carinata HOM05D004925 ORTHO05D005643 1.2e-21 108.2 261 33.7
Thhalv10016920m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 1.5e-21 107.8 313 33.2
Lj3g0011601 Lotus japonicus HOM05D004925 ORTHO05D005643 2.6e-21 107.1 309 34.3
TPR.G11699 Trifolium pratense HOM05D004925 ORTHO05D005643 4.4e-21 106.3 142 45.1
SEGI_38326 Sequoiadendron giganteum HOM05D004925 ORTHO05D005643 1.3e-20 104.8 209 38.8
HPP92_020314 Vanilla planifolia HOM05D004925 ORTHO05D005643 1.3e-20 104.8 172 43.6
Prupe.2G004100 Prunus persica HOM05D004925 ORTHO05D005643 1.7e-20 104.4 312 32.4
PGR119G0958 Punica granatum HOM05D004925 ORTHO05D005643 1.7e-20 104.4 243 34.6
unitig_22.g5889 Utricularia gibba HOM05D004925 ORTHO05D005643 1.7e-20 104.4 290 32.8
A05p12810 Brassica napus HOM05D004925 ORTHO05D005643 4.9e-20 102.8 305 32.5
BcaB01g00977 Brassica carinata HOM05D004925 ORTHO05D005643 8.4e-20 102.1 268 34.3
C04p16720 Brassica napus HOM05D004925 ORTHO05D005643 1.9e-19 100.9 311 33.4
BolC4t23220H Brassica oleracea HOM05D004925 ORTHO05D005643 2.4e-19 100.5 263 35.7
Sp1g03770 Schrenkiella parvula HOM05D004925 ORTHO05D005643 3.2e-19 100.1 290 32.1
Sed0010000 Sechium edule HOM05D004925 ORTHO05D005643 4.1e-19 99.8 316 34.2
BraA10t42612Z Brassica rapa HOM05D004925 ORTHO05D005643 5.4e-19 99.4 191 36.1
vmacro21158 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 7.1e-19 99.0 336 32.1
A10p03360 Brassica napus HOM05D004925 ORTHO05D005643 2.1e-18 97.4 315 30.8
Mapoly0040s0118 Marchantia polymorpha HOM05D004925 ORTHO05D005643 2.1e-18 97.4 156 44.2
Lalb_Chr25g0283541 Lupinus albus HOM05D004925 ORTHO05D005643 2.7e-18 97.1 260 33.5
BraA05t20219Z Brassica rapa HOM05D004925 ORTHO05D005643 4.6e-18 96.3 323 31.0
C05p03080 Brassica napus HOM05D004925 ORTHO05D005643 2.3e-17 94.0 308 33.8
BolC5t29090H Brassica oleracea HOM05D004925 ORTHO05D005643 3.0e-17 93.6 150 41.3
AUR62015612 Chenopodium quinoa HOM05D004925 ORTHO05D005643 5.1e-17 92.8 157 41.4
Aa31LG5G4490 Aethionema arabicum HOM05D004925 ORTHO05D005643 6.6e-17 92.4 302 32.1
Ciclev10032226m.g Citrus clementina HOM05D004925 ORTHO05D005643 8.7e-17 92.0 308 30.8
THA.LOC104816029 Tarenaya hassleriana HOM05D004925 ORTHO05D005643 1.5e-16 91.3 176 38.1
Thhalv10009447m.g Eutrema salsugineum HOM05D004925 ORTHO05D005643 4.3e-16 89.7 154 42.2
AT1G04930 Arabidopsis thaliana HOM05D004925 ORTHO05D005643 5.6e-16 89.4 174 37.4
Pp3c22_21740 Physcomitrium patens HOM05D004925 ORTHO05D005643 1.2e-15 88.2 213 33.3
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 2.1e-15 87.4 327 28.7
CARHR004330 Cardamine hirsuta HOM05D004925 ORTHO05D005643 3.6e-15 86.7 152 40.8
SGA_v2.0_scaffold4G02236 Striga asiatica HOM05D001227 ORTHO05D001082 1.8e-14 84.3 273 34.4
Sabra16G0137200 Salix brachista HOM05D004925 ORTHO05D005643 9.0e-14 82.0 92 54.3
EL10Ac8g20283 Beta vulgaris HOM05D004925 ORTHO05D005643 3.4e-13 80.1 210 34.3
Aa31LG1G19930 Aethionema arabicum HOM05D004925 ORTHO05D005643 2.4e-11 73.9 301 28.9
Os03g0234600 Oryza sativa ssp. japonica HOM05D004925 ORTHO05D005643 2.4e-11 73.9 107 41.1
AL1G14650 Arabidopsis lyrata HOM05D004925 ORTHO05D005643 1.6e-10 71.2 174 34.5
HanXRQChr11g0341671 Helianthus annuus HOM05D004925 ORTHO05D005643 3.5e-10 70.1 51 70.6
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 7.8e-10 68.9 372 25.3
Nitab4.5_0005278g0010 Nicotiana tabacum HOM05D004925 ORTHO05D005643 2.5e-08 63.9 278 29.5
Lj7A564G31 Lonicera japonica HOM05D004925 ORTHO05D005643 5.6e-08 62.8 66 47.0
A09p67630 Brassica napus HOM05D004925 ORTHO05D005643 9.6e-08 62.0 117 41.0
Oeu013586.1 Olea europaea HOM05D004925 ORTHO05D005643 9.6e-08 62.0 54 51.9
Rhsim06G0015600 Rhododendron simsii HOM05D004925 ORTHO05D005643 2.1e-07 60.8 298 27.5
Haze_10406 Corylus avellana HOM05D004925 ORTHO05D005643 5.3e-06 56.2 72 44.4
BcaB03g16451 Brassica carinata HOM05D004925 ORTHO05D005643 9.0e-06 55.5 87 40.2


User provided reference genes

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