Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0748 Ceratophyllum demersum HOM05D005447 ORTHO05D006730 1.4e-142 509.6 251 100.0
Dinv27967 Davidia involucrata HOM05D005447 ORTHO05D006730 1.6e-66 256.9 176 71.0
Actinidia30302 Actinidia chinensis HOM05D005447 ORTHO05D006730 2.1e-66 256.5 177 71.2
Eucgr.C03005 Eucalyptus grandis HOM05D005447 ORTHO05D006730 4.6e-66 255.4 176 69.3
TAR626G0638 Trochodendron aralioides HOM05D005447 ORTHO05D006730 1.0e-65 254.2 176 68.2
CSS0040006 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 1.3e-65 253.8 176 69.9
CSS0008615 Camellia sinensis var. sinensis HOM05D005447 ORTHO05D006730 1.8e-65 253.4 176 69.3
Nn8g38949 Nelumbo nucifera HOM05D005447 ORTHO05D006730 8.7e-65 251.1 176 68.2
Cpa.g.sc7.194 Carica papaya HOM05D005447 ORTHO05D006730 1.5e-64 250.4 176 69.3
Cfa017935 Carpinus fangiana HOM05D005447 ORTHO05D006730 2.5e-64 249.6 176 69.3
CANSAT25G3707 Cannabis sativa HOM05D005447 ORTHO05D006730 5.7e-64 248.4 178 66.9
EL10Ac2g03925 Beta vulgaris HOM05D005447 ORTHO05D006730 9.7e-64 247.7 176 67.6
Peaxi162Scf00064g01636 Petunia axillaris HOM05D005447 ORTHO05D006730 9.7e-64 247.7 179 68.2
Sopen12g031820 Solanum pennellii HOM05D005447 ORTHO05D006730 9.7e-64 247.7 178 65.7
PGSC0003DMG400029302 Solanum tuberosum HOM05D005447 ORTHO05D006730 9.7e-64 247.7 178 65.7
Cc08_g10370 Coffea canephora HOM05D005447 ORTHO05D006730 1.3e-63 247.3 177 68.4
Solyc12g095920.2 Solanum lycopersicum HOM05D005447 ORTHO05D006730 1.3e-63 247.3 178 65.7
Peaxi162Scf00436g00831 Petunia axillaris HOM05D005447 ORTHO05D006730 3.7e-63 245.7 178 65.7
CiPaw.16G030000 Carya illinoinensis HOM05D005447 ORTHO05D006730 6.3e-63 245.0 176 67.6
Aqoxy6G02809 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 1.8e-62 243.4 176 67.6
Ciclev10009241m.g Citrus clementina HOM05D005447 ORTHO05D006730 1.8e-62 243.4 176 68.2
Migut.A00152 Erythranthe guttata HOM05D005447 ORTHO05D006730 1.8e-62 243.4 176 64.8
QL02p001555 Quercus lobata HOM05D005447 ORTHO05D006730 4.1e-62 242.3 176 67.0
Hund03355 Selenicereus undatus HOM05D005447 ORTHO05D006730 5.3e-62 241.9 176 66.5
Nitab4.5_0000738g0170 Nicotiana tabacum HOM05D005447 ORTHO05D006730 6.9e-62 241.5 179 64.8
Sed0025565 Sechium edule HOM05D005447 ORTHO05D006730 1.2e-61 240.7 176 65.3
THA.LOC104803734 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 1.2e-61 240.7 176 67.0
Hma1.2p1_1213F.1_g267530 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.0e-61 240.0 178 65.2
Hma1.2p1_2708F.1_g327220 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 2.0e-61 240.0 178 65.2
RcHm_v2.0_Chr6g0310521 Rosa chinensis HOM05D005447 ORTHO05D006730 2.0e-61 240.0 172 66.9
Aqoxy7G03929 Aquilegia oxysepala HOM05D005447 ORTHO05D006730 2.6e-61 239.6 176 67.0
CsaV3_4G035510 Cucumis sativus L. HOM05D005447 ORTHO05D006730 3.4e-61 239.2 176 64.2
FvH4_2g32160 Fragaria vesca HOM05D005447 ORTHO05D006730 3.4e-61 239.2 172 66.3
FAN27G1388 Fragaria x ananassa HOM05D005447 ORTHO05D006730 3.4e-61 239.2 172 66.3
MELO3C016858.2 Cucumis melo HOM05D005447 ORTHO05D006730 4.5e-61 238.8 176 64.2
HPP92_026778 Vanilla planifolia HOM05D005447 ORTHO05D006730 4.5e-61 238.8 177 65.0
vmacro00161 Vaccinium macrocarpon HOM05D005447 ORTHO05D006730 5.9e-61 238.4 198 61.1
Medtr3g081440 Medicago truncatula HOM05D005447 ORTHO05D006730 7.7e-61 238.0 171 66.1
TWI34G1470 Tripterygium wilfordii HOM05D005447 ORTHO05D006730 1.0e-60 237.7 176 67.0
Lsat_1_v5_gn_6_7400 Lactuca sativa HOM05D005447 ORTHO05D006730 1.3e-60 237.3 176 64.8
Prupe.1G414700 Prunus persica HOM05D005447 ORTHO05D006730 1.7e-60 236.9 172 65.7
Ca_15869_v3 Cicer arietinum L. HOM05D005447 ORTHO05D006730 3.8e-60 235.7 171 65.5
Lju3103C0G11 Lonicera japonica HOM05D005447 ORTHO05D006730 3.8e-60 235.7 205 60.0
MD08G1073300 Malus domestica HOM05D005447 ORTHO05D006730 3.8e-60 235.7 172 66.3
Lj1g0020487 Lotus japonicus HOM05D005447 ORTHO05D006730 8.5e-60 234.6 172 64.5
Manes.16G078100 Manihot esculenta HOM05D005447 ORTHO05D006730 1.1e-59 234.2 176 64.8
PSO063G2264 Papaver somniferum HOM05D005447 ORTHO05D006730 1.1e-59 234.2 178 66.9
Sc06g0000920 Simmondsia chinensis HOM05D005447 ORTHO05D006730 1.1e-59 234.2 176 65.9
SGA_v2.0_scaffold1040G53805 Striga asiatica HOM05D005447 ORTHO05D006730 1.1e-59 234.2 176 62.5
C07p59440 Brassica napus HOM05D005447 ORTHO05D006730 1.4e-59 233.8 176 63.6
BolC7t46387H Brassica oleracea HOM05D005447 ORTHO05D006730 1.4e-59 233.8 176 63.6
SalBow4G2766 Salvia bowleyana HOM05D005447 ORTHO05D006730 1.4e-59 233.8 176 61.9
Atru.chr7.2018 Acer truncatum HOM05D005447 ORTHO05D006730 1.9e-59 233.4 176 64.8
Carub.0007s0752 Capsella rubella HOM05D005447 ORTHO05D006730 2.5e-59 233.0 176 63.1
Aa31sc248G10 Aethionema arabicum HOM05D005447 ORTHO05D006730 4.2e-59 232.3 176 64.2
PSO832G2924 Papaver somniferum HOM05D005447 ORTHO05D006730 4.2e-59 232.3 178 66.3
A03p61720 Brassica napus HOM05D005447 ORTHO05D006730 5.5e-59 231.9 176 63.6
BraA03t15210Z Brassica rapa HOM05D005447 ORTHO05D006730 5.5e-59 231.9 176 63.6
Psat5g036560 Pisum sativum HOM05D005447 ORTHO05D006730 5.5e-59 231.9 172 62.8
unitig_748.g8015 Utricularia gibba HOM05D005447 ORTHO05D006730 7.2e-59 231.5 176 63.6
Gorai.009G046500 Gossypium raimondii HOM05D005447 ORTHO05D006730 9.4e-59 231.1 166 69.9
arahy.Tifrunner.gnm1.ann1.PT16FZ Arachis hypogaea HOM05D005447 ORTHO05D006730 1.6e-58 230.3 177 62.1
DCAR_004444 Daucus carota HOM05D005447 ORTHO05D006730 1.6e-58 230.3 176 64.2
AL7G18730 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 2.1e-58 229.9 176 61.9
AT4G32960 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 2.1e-58 229.9 176 61.9
MSTRG.11670 Avicennia marina HOM05D005447 ORTHO05D006730 2.1e-58 229.9 176 61.4
CARHR240980 Cardamine hirsuta HOM05D005447 ORTHO05D006730 2.1e-58 229.9 176 63.6
Gohir.D05G045300 Gossypium hirsutum HOM05D005447 ORTHO05D006730 2.1e-58 229.9 166 69.3
Gohir.A05G043700 Gossypium hirsutum HOM05D005447 ORTHO05D006730 2.7e-58 229.6 166 69.3
HanXRQChr09g0251181 Helianthus annuus HOM05D005447 ORTHO05D006730 2.7e-58 229.6 177 65.0
Thecc.09G051400 Theobroma cacao HOM05D005447 ORTHO05D006730 2.7e-58 229.6 166 69.3
arahy.Tifrunner.gnm1.ann1.H6GXLW Arachis hypogaea HOM05D005447 ORTHO05D006730 3.6e-58 229.2 177 61.6
Sabra18G0050000 Salix brachista HOM05D005447 ORTHO05D006730 4.6e-58 228.8 178 64.6
Hma1.2p1_0482F.1_g162683 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 6.1e-58 228.4 171 64.9
Hma1.2p1_1944F.1_g308590 Hydrangea macrophylla HOM05D005447 ORTHO05D006730 6.1e-58 228.4 171 64.9
BcaNung02148 Brassica carinata HOM05D005447 ORTHO05D006730 7.9e-58 228.0 176 62.5
Lalb_Chr08g0245101 Lupinus albus HOM05D005447 ORTHO05D006730 7.9e-58 228.0 170 63.5
Duzib168G1543 Durio zibethinus HOM05D005447 ORTHO05D006730 1.0e-57 227.6 166 69.3
Thhalv10025994m.g Eutrema salsugineum HOM05D005447 ORTHO05D006730 1.0e-57 227.6 176 61.4
Potri.018G061800 Populus trichocarpa HOM05D005447 ORTHO05D006730 1.4e-57 227.3 178 64.0
Duzib187G1160 Durio zibethinus HOM05D005447 ORTHO05D006730 2.3e-57 226.5 166 69.9
ATR0789G081 Amborella trichopoda HOM05D005447 ORTHO05D006730 5.1e-57 225.3 165 64.8
Nitab4.5_0011306g0050 Nicotiana tabacum HOM05D005447 ORTHO05D006730 8.8e-57 224.6 198 58.6
Sp7g30740 Schrenkiella parvula HOM05D005447 ORTHO05D006730 8.8e-57 224.6 176 61.9
ECA233G2666 Erigeron canadensis HOM05D005447 ORTHO05D006730 1.5e-56 223.8 177 62.7
Psat5g106840 Pisum sativum HOM05D005447 ORTHO05D006730 1.5e-56 223.8 174 60.9
PGR044G0161 Punica granatum HOM05D005447 ORTHO05D006730 2.0e-56 223.4 176 64.2
Glyma.06G051000 Glycine max HOM05D005447 ORTHO05D006730 7.4e-56 221.5 177 61.6
Prupe.6G150100 Prunus persica HOM05D005447 ORTHO05D006730 1.3e-55 220.7 171 62.0
VMungo1309G1567 Vigna mungo HOM05D005447 ORTHO05D006730 8.2e-55 218.0 172 59.9
Os06g0150100 Oryza sativa ssp. japonica HOM05D005447 ORTHO05D006730 1.1e-54 217.6 164 64.0
Phvul.009G076500 Phaseolus vulgaris HOM05D005447 ORTHO05D006730 4.1e-54 215.7 172 59.3
COL.COLO4_21030 Corchorus olitorius HOM05D005447 ORTHO05D006730 1.5e-53 213.8 166 65.7
DCAR_004445 Daucus carota HOM05D005447 ORTHO05D006730 2.0e-53 213.4 176 59.7
Zm00001eb270840 Zea mays HOM05D005447 ORTHO05D006730 3.4e-53 212.6 165 61.8
AUR62022047 Chenopodium quinoa HOM05D005447 ORTHO05D006730 1.0e-52 211.1 176 61.4
SEGI_08476 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 2.2e-52 209.9 169 60.9
AUR62009180 Chenopodium quinoa HOM05D005447 ORTHO05D006730 3.8e-52 209.1 176 60.2
Carub.0007s0751 Capsella rubella HOM05D005447 ORTHO05D006730 4.2e-51 205.7 178 56.2
AL7G18720 Arabidopsis lyrata HOM05D005447 ORTHO05D006730 1.6e-50 203.8 178 58.4
AT4G32970 Arabidopsis thaliana HOM05D005447 ORTHO05D006730 1.4e-49 200.7 178 56.7
CARHR240970 Cardamine hirsuta HOM05D005447 ORTHO05D006730 1.5e-48 197.2 176 56.2
THA.LOC104818575 Tarenaya hassleriana HOM05D005447 ORTHO05D006730 3.3e-48 196.1 177 55.9
Pp3c6_24590 Physcomitrium patens HOM05D005447 ORTHO05D006730 6.3e-47 191.8 174 55.7
Haze_18213 Corylus avellana HOM05D005447 ORTHO05D006730 2.4e-46 189.9 131 71.8
Nitab4.5_0001179g0010 Nicotiana tabacum HOM05D005447 ORTHO05D006730 2.6e-45 186.4 130 66.9
Lj7C280G4 Lonicera japonica HOM05D005447 ORTHO05D006730 3.5e-45 186.0 205 51.2
Oeu057690.3 Olea europaea HOM05D005447 ORTHO05D006730 4.5e-45 185.7 128 69.5
AUR62022045 Chenopodium quinoa HOM05D005447 ORTHO05D006730 4.2e-43 179.1 126 67.5
Mapoly0129s0035 Marchantia polymorpha HOM05D005447 ORTHO05D006730 4.2e-43 179.1 170 51.2
ClCG05G017740 Citrullus lanatus HOM05D005447 ORTHO05D006730 1.4e-41 174.1 128 64.1
Ah.11g044670 Amaranthus hybridus HOM05D005447 ORTHO05D006730 5.7e-40 168.7 176 50.0
FAN15G0839 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.4e-38 163.3 101 74.3
SMO367G0921 Selaginella moellendorffii HOM05D005447 ORTHO05D006730 5.0e-36 155.6 170 44.7
AagrBONN_evm.TU.Sc2ySwM_344.4531 Anthoceros agrestis HOM05D005447 ORTHO05D006730 2.5e-35 153.3 154 51.9
CBR_g6395 Chara braunii HOM05D005447 ORTHO05D006730 3.0e-33 146.4 180 46.1
Eucgr.C03947 Eucalyptus grandis HOM05D005447 ORTHO05D006730 4.1e-30 136.0 106 64.2
Nitab4.5_0000359g0050 Nicotiana tabacum HOM05D006502 ORTHO05D006730 5.9e-29 132.1 77 75.3
FAN24G0255 Fragaria x ananassa HOM05D005447 ORTHO05D006730 2.6e-24 116.7 98 60.2
Oeu036349.1 Olea europaea HOM05D005447 ORTHO05D006730 5.7e-24 115.5 97 59.8
AUR62009181 Chenopodium quinoa HOM05D005447 ORTHO05D006730 2.2e-23 113.6 102 54.9
FAN20G2744 Fragaria x ananassa HOM05D005447 ORTHO05D006730 3.7e-23 112.8 98 58.2
C01p05700 Brassica napus HOM05D005447 ORTHO05D006730 1.0e-20 104.8 88 59.1
BolC1t00551H Brassica oleracea HOM05D005447 ORTHO05D006730 1.0e-20 104.8 88 59.1
GSVIVG01035346001 Vitis vinifera HOM05D005447 ORTHO05D006730 1.0e-20 104.8 90 60.0
MSTRG.25940 Avicennia marina HOM05D005447 ORTHO05D006730 1.3e-20 104.4 65 69.2
SEGI_23140 Sequoiadendron giganteum HOM05D005447 ORTHO05D006730 1.6e-18 97.4 101 50.5
VMungo0540G0355 Vigna mungo HOM05D005447 ORTHO05D006730 2.1e-18 97.1 105 44.8
VMungo0251G2120 Vigna mungo HOM05D005447 ORTHO05D006730 4.1e-14 82.8 105 41.0
Actinidia01202 Actinidia chinensis HOM05D005447 ORTHO05D006730 9.5e-11 71.6 53 62.3
Cre13.g604850 Chlamydomonas reinhardtii HOM05D005447 ORTHO05D006730 1.2e-10 71.2 194 29.4
AUR62025497 Chenopodium quinoa HOM05D005447 ORTHO05D006730 7.5e-08 62.0 47 61.7
TPR.G36227 Trifolium pratense HOM05D005447 ORTHO05D006730 3.2e-06 56.6 43 58.1
SHI18783 Sapria himalayana HOM05D005447 ORTHO05D006730 7.0e-06 55.5 40 65.0


User provided reference genes

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