Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 5.6e-203 710.7 348 100.0
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 4.2e-174 614.8 317 92.7
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 1.1e-121 440.7 325 64.3
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 5.4e-121 438.3 325 64.0
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.7e-114 416.8 319 62.1
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 3.7e-114 415.6 315 62.5
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 3.7e-114 415.6 348 57.8
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 2.7e-112 409.5 312 60.6
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 3.5e-112 409.1 359 56.8
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 4.5e-112 408.7 338 58.0
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 4.5e-112 408.7 312 62.5
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 5.9e-112 408.3 316 62.0
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 7.7e-112 407.9 325 60.6
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 1.0e-111 407.5 323 61.0
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 2.9e-111 406.0 344 57.0
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 6.6e-111 404.8 319 61.8
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 6.6e-111 404.8 289 65.7
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 6.6e-111 404.8 324 59.3
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.1e-110 404.1 314 59.6
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 1.5e-110 403.7 324 59.6
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 1.9e-110 403.3 324 59.3
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.5e-110 402.9 314 61.1
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 3.3e-110 402.5 321 59.8
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 1.2e-109 400.6 314 59.9
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.6e-109 400.2 320 60.3
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 3.6e-109 399.1 317 60.9
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 3.6e-109 399.1 271 67.9
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 3.6e-109 399.1 349 57.0
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 8.0e-109 397.9 346 57.2
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 1.4e-108 397.1 344 57.3
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 1.4e-108 397.1 360 56.1
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 1.8e-108 396.7 291 62.5
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 6.8e-108 394.8 331 56.8
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 8.9e-108 394.4 334 56.6
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 1.2e-107 394.0 323 57.6
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 2.6e-107 392.9 323 58.5
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 2.6e-107 392.9 297 63.0
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 4.4e-107 392.1 347 56.2
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 4.4e-107 392.1 324 57.7
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 5.7e-107 391.7 342 56.4
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 7.5e-107 391.3 325 57.8
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 2.9e-106 389.4 341 57.2
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 3.7e-106 389.0 323 58.5
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 3.7e-106 389.0 325 56.6
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 6.4e-106 388.3 323 58.5
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 8.3e-106 387.9 323 58.5
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 1.4e-105 387.1 327 57.8
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 1.8e-105 386.7 327 58.1
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 3.2e-105 386.0 318 57.9
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 3.2e-105 386.0 291 62.2
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 5.4e-105 385.2 304 58.9
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 5.4e-105 385.2 348 55.5
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 7.0e-105 384.8 349 55.0
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 9.2e-105 384.4 279 65.2
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 1.2e-104 384.0 323 58.2
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 2.0e-104 383.3 323 57.0
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 2.0e-104 383.3 323 57.6
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 3.5e-104 382.5 354 53.7
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 5.9e-104 381.7 325 58.2
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.0e-103 380.9 349 54.7
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 1.7e-103 380.2 316 58.9
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 3.0e-103 379.4 327 57.2
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 3.0e-103 379.4 319 58.6
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 3.9e-103 379.0 307 61.6
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 5.0e-103 378.6 304 58.9
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 6.6e-103 378.3 290 63.1
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 8.6e-103 377.9 321 57.3
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 8.6e-103 377.9 325 56.3
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 1.5e-102 377.1 290 62.8
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 3.3e-102 375.9 323 57.0
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 9.5e-102 374.4 308 58.4
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 1.6e-101 373.6 327 56.0
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 8.0e-101 371.3 314 58.0
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 8.0e-101 371.3 319 56.7
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 1.0e-100 370.9 323 57.3
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 6.8e-100 368.2 314 57.3
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 6.8e-100 368.2 314 57.3
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 6.8e-100 368.2 314 57.3
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 1.5e-99 367.1 318 56.9
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 1.5e-99 367.1 353 53.0
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 3.4e-99 365.9 336 54.2
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 5.8e-99 365.2 290 59.3
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 9.8e-99 364.4 325 56.0
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 6.4e-98 361.7 342 55.6
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 1.9e-97 360.1 352 52.8
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 5.4e-97 358.6 250 65.6
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 5.4e-97 358.6 370 50.3
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 7.8e-96 354.8 245 66.9
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 5.0e-95 352.1 316 54.7
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 4.3e-94 349.0 329 53.2
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 6.0e-88 328.6 290 54.5
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 1.5e-83 313.9 215 67.0
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 4.7e-77 292.4 276 52.9
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 3.1e-76 289.7 245 55.1
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 1.7e-74 283.9 323 47.1
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 1.3e-58 231.1 294 40.5
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 8.4e-58 228.4 323 40.2
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 2.7e-56 223.4 150 70.0
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 8.7e-55 218.4 339 38.3
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 4.9e-50 202.6 293 37.2
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 1.5e-46 191.0 328 34.8
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 3.3e-46 189.9 269 38.7
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 4.8e-45 186.0 178 50.0
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 1.7e-42 177.6 124 66.1
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 1.7e-42 177.6 124 66.1
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 1.3e-39 167.9 117 65.8
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 3.9e-31 139.8 99 68.7
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 6.7e-31 139.0 123 54.5
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 1.1e-30 138.3 139 53.2
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 1.5e-30 137.9 135 50.4
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 7.4e-30 135.6 162 46.3
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 2.9e-26 123.6 313 29.7
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 5.3e-20 102.8 209 31.1
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 1.1e-12 78.6 222 31.5
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 2.9e-10 70.5 94 45.7
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 5.0e-10 69.7 92 46.7


User provided reference genes

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