Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0719 Ceratophyllum demersum HOM05D005252 ORTHO05D006788 1.3e-134 483.0 234 100.0
MBI06_g19632_MAGBIO Magnolia biondii HOM05D005252 ORTHO05D006788 1.4e-64 250.4 219 57.5
TAR622G0726 Trochodendron aralioides HOM05D005252 ORTHO05D006788 6.9e-64 248.1 221 55.2
ClCG05G011370 Citrullus lanatus HOM05D005252 ORTHO05D006788 2.6e-63 246.1 222 55.0
Cfa007750 Carpinus fangiana HOM05D005252 ORTHO05D006788 3.4e-63 245.7 222 56.3
Haze_14323 Corylus avellana HOM05D005252 ORTHO05D006788 3.4e-63 245.7 221 56.1
Nn5g27060 Nelumbo nucifera HOM05D005252 ORTHO05D006788 4.5e-63 245.4 221 56.1
Cpa.g.sc178.38 Carica papaya HOM05D005252 ORTHO05D006788 2.9e-62 242.7 230 53.5
Sed0007469 Sechium edule HOM05D005252 ORTHO05D006788 3.8e-62 242.3 222 55.0
Actinidia28776 Actinidia chinensis HOM05D005252 ORTHO05D006788 1.4e-61 240.4 225 53.8
QL02p064187 Quercus lobata HOM05D005252 ORTHO05D006788 4.2e-61 238.8 232 53.4
CsaV3_3G021090 Cucumis sativus L. HOM05D005252 ORTHO05D006788 2.1e-60 236.5 222 52.3
CSS0014125 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 2.7e-60 236.1 227 53.7
Glyma.14G209800 Glycine max HOM05D005252 ORTHO05D006788 6.0e-60 235.0 219 51.1
VMungo0647G0073 Vigna mungo HOM05D005252 ORTHO05D006788 7.9e-60 234.6 225 51.6
PSO782G3987 Papaver somniferum HOM05D005252 ORTHO05D006788 1.8e-59 233.4 224 53.6
vmacro18507 Vaccinium macrocarpon HOM05D005252 ORTHO05D006788 1.8e-59 233.4 224 51.3
Ca_05755_v3 Cicer arietinum L. HOM05D005252 ORTHO05D006788 3.0e-59 232.6 226 49.6
CiPaw.04G049400 Carya illinoinensis HOM05D005252 ORTHO05D006788 3.9e-59 232.3 223 54.3
PSO063G5026 Papaver somniferum HOM05D005252 ORTHO05D006788 3.9e-59 232.3 224 52.7
Potri.004G081400 Populus trichocarpa HOM05D005252 ORTHO05D006788 1.9e-58 229.9 224 53.6
MD17G1287300 Malus domestica HOM05D005252 ORTHO05D006788 2.5e-58 229.6 221 52.0
Atru.chr1.2124 Acer truncatum HOM05D005252 ORTHO05D006788 3.3e-58 229.2 231 50.6
HanXRQChr14g0443361 Helianthus annuus HOM05D005252 ORTHO05D006788 3.3e-58 229.2 227 51.5
Medtr5g076640 Medicago truncatula HOM05D005252 ORTHO05D006788 3.3e-58 229.2 227 50.7
RcHm_v2.0_Chr3g0488621 Rosa chinensis HOM05D005252 ORTHO05D006788 3.3e-58 229.2 222 52.3
CSS0009455 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 7.4e-58 228.0 227 52.4
Lsat_1_v5_gn_2_71861 Lactuca sativa HOM05D005252 ORTHO05D006788 9.6e-58 227.6 230 50.4
LjContig00141g0010829 Lotus japonicus HOM05D005252 ORTHO05D006788 9.6e-58 227.6 223 49.3
Prupe.3G014000 Prunus persica HOM05D005252 ORTHO05D006788 1.6e-57 226.9 218 52.3
arahy.Tifrunner.gnm1.ann1.UX6KKC Arachis hypogaea HOM05D005252 ORTHO05D006788 2.8e-57 226.1 219 49.8
Hma1.2p1_0158F.1_g069575 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 4.8e-57 225.3 219 53.9
Hma1.2p1_0158F.1_g069580 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 4.8e-57 225.3 219 53.9
Ciclev10011537m.g Citrus clementina HOM05D005252 ORTHO05D006788 8.2e-57 224.6 224 51.3
FvH4_1g27420 Fragaria vesca HOM05D005252 ORTHO05D006788 8.2e-57 224.6 223 51.6
Dinv19082 Davidia involucrata HOM05D000783 ORTHO05D000705 1.1e-56 224.2 204 56.4
TPR.G5289 Trifolium pratense HOM05D005252 ORTHO05D006788 1.4e-56 223.8 227 48.9
EL10Ac4g08917 Beta vulgaris HOM05D005252 ORTHO05D006788 5.3e-56 221.9 227 49.8
Duzib133G0566 Durio zibethinus HOM05D005252 ORTHO05D006788 9.0e-56 221.1 226 52.2
Phvul.008G241400 Phaseolus vulgaris HOM05D005252 ORTHO05D006788 9.0e-56 221.1 225 48.9
arahy.Tifrunner.gnm1.ann1.Y82BEI Arachis hypogaea HOM05D005252 ORTHO05D006788 1.2e-55 220.7 219 48.9
FAN28G2815 Fragaria x ananassa HOM05D005252 ORTHO05D006788 1.5e-55 220.3 225 51.1
Thecc.04G057900 Theobroma cacao HOM05D005252 ORTHO05D006788 2.0e-55 219.9 223 52.0
Zm00001eb320090 Zea mays HOM05D005252 ORTHO05D006788 2.0e-55 219.9 226 46.9
arahy.Tifrunner.gnm1.ann1.P1K6DT Arachis hypogaea HOM05D005252 ORTHO05D006788 3.4e-55 219.2 219 48.9
Psat2g042800 Pisum sativum HOM05D005252 ORTHO05D006788 3.4e-55 219.2 225 47.6
Lalb_Chr04g0251511 Lupinus albus HOM05D005252 ORTHO05D006788 4.5e-55 218.8 225 47.6
Glyma.02G240302 Glycine max HOM05D005252 ORTHO05D006788 5.9e-55 218.4 217 47.5
TWI74G0077 Tripterygium wilfordii HOM05D005252 ORTHO05D006788 5.9e-55 218.4 221 52.5
THA.LOC104820865 Tarenaya hassleriana HOM05D005252 ORTHO05D006788 7.6e-55 218.0 230 49.1
Ah.06g191550 Amaranthus hybridus HOM05D005252 ORTHO05D006788 1.0e-54 217.6 223 50.7
Peaxi162Scf00713g00214 Petunia axillaris HOM05D005252 ORTHO05D006788 1.0e-54 217.6 225 50.2
DCAR_003403 Daucus carota HOM05D005252 ORTHO05D006788 2.9e-54 216.1 225 50.2
GSVIVG01035253001 Vitis vinifera HOM05D005252 ORTHO05D006788 5.0e-54 215.3 221 50.2
FAN23G1936 Fragaria x ananassa HOM05D005252 ORTHO05D006788 6.5e-54 214.9 225 49.8
PGR004G2027 Punica granatum HOM05D005252 ORTHO05D006788 6.5e-54 214.9 223 51.6
Nitab4.5_0008137g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 8.5e-54 214.5 218 51.4
Aqoxy3G04163 Aquilegia oxysepala HOM05D005252 ORTHO05D006788 1.9e-53 213.4 222 50.0
Nitab4.5_0000483g0240 Nicotiana tabacum HOM05D005252 ORTHO05D006788 1.9e-53 213.4 223 50.2
BcaC03g18544 Brassica carinata HOM05D005252 ORTHO05D006788 2.5e-53 213.0 226 47.3
Lj2C511T2 Lonicera japonica HOM05D005252 ORTHO05D006788 3.2e-53 212.6 228 49.6
SGA_v2.0_scaffold115G32046 Striga asiatica HOM05D005252 ORTHO05D006788 4.2e-53 212.2 225 48.4
COL.COLO4_20051 Corchorus olitorius HOM05D005252 ORTHO05D006788 5.5e-53 211.8 222 51.8
SalBow5G4252 Salvia bowleyana HOM05D005252 ORTHO05D006788 5.5e-53 211.8 217 48.8
SalBow5G4267 Salvia bowleyana HOM05D005252 ORTHO05D006788 5.5e-53 211.8 217 48.8
CAN.G1681.16 Capsicum annuum HOM05D005252 ORTHO05D006788 7.2e-53 211.5 229 48.9
Os07g0471100 Oryza sativa ssp. japonica HOM05D005252 ORTHO05D006788 9.3e-53 211.1 226 45.6
BcaNung00410 Brassica carinata HOM05D005252 ORTHO05D006788 1.6e-52 210.3 222 47.3
BolC2t06801H Brassica oleracea HOM05D005252 ORTHO05D006788 1.6e-52 210.3 226 46.5
BraA02t05370Z Brassica rapa HOM05D005252 ORTHO05D006788 2.7e-52 209.5 226 47.8
C02p08920 Brassica napus HOM05D005252 ORTHO05D006788 3.6e-52 209.1 226 46.5
CARHR195970 Cardamine hirsuta HOM05D005252 ORTHO05D006788 3.6e-52 209.1 224 48.2
A02p04080 Brassica napus HOM05D005252 ORTHO05D006788 7.9e-52 208.0 225 47.6
Gohir.A12G052400 Gossypium hirsutum HOM05D005252 ORTHO05D006788 1.3e-51 207.2 246 44.7
Gohir.D12G051000 Gossypium hirsutum HOM05D005252 ORTHO05D006788 2.3e-51 206.5 246 45.5
Thhalv10015946m.g Eutrema salsugineum HOM05D005252 ORTHO05D006788 3.0e-51 206.1 232 47.0
Gorai.008G054300 Gossypium raimondii HOM05D005252 ORTHO05D006788 5.1e-51 205.3 246 45.1
Sp6g26990 Schrenkiella parvula HOM05D005252 ORTHO05D006788 6.7e-51 204.9 230 46.5
Cc07_g12720 Coffea canephora HOM05D005252 ORTHO05D006788 8.7e-51 204.5 217 49.3
Migut.K00975 Erythranthe guttata HOM05D005252 ORTHO05D006788 8.7e-51 204.5 213 47.9
CANSAT56G0277 Cannabis sativa HOM05D005252 ORTHO05D006788 1.1e-50 204.1 221 47.5
AUR62004761 Chenopodium quinoa HOM05D005252 ORTHO05D006788 1.9e-50 203.4 220 47.3
Eucgr.F02912 Eucalyptus grandis HOM05D005252 ORTHO05D006788 3.3e-50 202.6 206 51.0
AUR62037491 Chenopodium quinoa HOM05D005252 ORTHO05D006788 4.3e-50 202.2 224 48.2
FAN28G2525 Fragaria x ananassa HOM05D005252 ORTHO05D006788 4.3e-50 202.2 215 49.8
Oeu060821.2 Olea europaea HOM05D005252 ORTHO05D006788 7.4e-50 201.4 226 46.0
Sabra04G0054100 Salix brachista HOM05D005252 ORTHO05D006788 6.3e-49 198.4 228 47.4
Rhsim08G0021900 Rhododendron simsii HOM05D005252 ORTHO05D006788 8.2e-49 198.0 144 64.6
AT5G17240 Arabidopsis thaliana HOM05D005252 ORTHO05D006788 1.1e-48 197.6 230 45.7
Aa31LG11G12430 Aethionema arabicum HOM05D005252 ORTHO05D006788 1.4e-48 197.2 224 46.4
AL6G28290 Arabidopsis lyrata HOM05D005252 ORTHO05D006788 6.9e-48 194.9 230 46.1
FAN19G2162 Fragaria x ananassa HOM05D005252 ORTHO05D006788 6.9e-48 194.9 148 62.8
CSS0013830 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 1.5e-47 193.7 223 47.5
Sopen02g025950 Solanum pennellii HOM05D005252 ORTHO05D006788 1.5e-47 193.7 224 48.2
PGSC0003DMG400016732 Solanum tuberosum HOM05D005252 ORTHO05D006788 1.5e-47 193.7 224 48.2
ECA238G3559 Erigeron canadensis HOM05D005252 ORTHO05D006788 2.6e-47 193.0 213 47.9
Sc20g0000830 Simmondsia chinensis HOM05D005252 ORTHO05D006788 2.6e-47 193.0 222 48.6
Hund22213 Selenicereus undatus HOM05D005252 ORTHO05D006788 3.4e-47 192.6 210 48.1
Solyc02g081320.4 Solanum lycopersicum HOM05D005252 ORTHO05D006788 1.3e-46 190.7 224 46.9
arahy.Tifrunner.gnm1.ann1.2Q625H Arachis hypogaea HOM05D005252 ORTHO05D006788 3.8e-46 189.1 196 47.4
Nitab4.5_0011448g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 6.5e-46 188.3 218 47.7
SEGI_32636 Sequoiadendron giganteum HOM05D005252 ORTHO05D006788 3.9e-43 179.1 251 39.8
unitig_748.g8447 Utricularia gibba HOM05D001485 ORTHO05D001384 1.1e-42 177.6 206 49.0
HPP92_025609 Vanilla planifolia HOM05D005252 ORTHO05D006788 2.0e-42 176.8 204 46.1
Manes.01G124000 Manihot esculenta HOM05D005252 ORTHO05D006788 3.1e-40 169.5 207 47.3
SHI24494 Sapria himalayana HOM05D005252 ORTHO05D006788 3.2e-37 159.5 215 41.9
ATR0807G103 Amborella trichopoda HOM05D005252 ORTHO05D006788 9.7e-34 147.9 225 40.0
Pp3c1_22230 Physcomitrium patens HOM05D005252 ORTHO05D006788 9.1e-32 141.4 253 37.9
AagrBONN_evm.TU.Sc2ySwM_344.1683 Anthoceros agrestis HOM05D005252 ORTHO05D006788 5.5e-29 132.1 152 46.1
Mapoly0060s0114 Marchantia polymorpha HOM05D005252 ORTHO05D006788 7.2e-29 131.7 244 34.8
Psat6g212680 Pisum sativum HOM05D005252 ORTHO05D006788 3.0e-27 126.3 100 58.0
AagrBONN_evm.TU.Sc2ySwM_344.1689 Anthoceros agrestis HOM05D005252 ORTHO05D006788 6.7e-27 125.2 152 44.1
SMO244G0074 Selaginella moellendorffii HOM05D005252 ORTHO05D006788 8.8e-27 124.8 234 35.0
Carub.0006s1543 Capsella rubella HOM05D005252 ORTHO05D006788 7.2e-21 105.1 73 68.5
CBR_g38413 Chara braunii HOM05D005252 ORTHO05D006788 1.6e-20 104.0 156 39.7
BcaC03g18542 Brassica carinata HOM05D005252 ORTHO05D032136 3.6e-12 76.3 58 60.3
Cre10.g437829 Chlamydomonas reinhardtii HOM05D005252 ORTHO05D006788 3.6e-12 76.3 163 30.7
MCO06G238 Micromonas commoda HOM05D005252 ORTHO05D006788 8.6e-06 55.1 67 46.3


User provided reference genes

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