Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0700 Ceratophyllum demersum HOM05D006813 ORTHO05D008657 9.4e-220 766.5 380 100.0
MBI07_g46965_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 1.2e-147 526.9 354 70.9
Nn4g23302 Nelumbo nucifera HOM05D006813 ORTHO05D008657 2.4e-146 522.7 362 69.3
QL02p085115 Quercus lobata HOM05D006813 ORTHO05D008657 3.2e-143 512.3 345 71.6
TAR371G1040 Trochodendron aralioides HOM05D006813 ORTHO05D008657 3.2e-143 512.3 358 70.4
Haze_14484 Corylus avellana HOM05D006813 ORTHO05D008657 1.6e-142 510.0 357 69.2
Sc14g0006120 Simmondsia chinensis HOM05D006813 ORTHO05D008657 7.8e-142 507.7 363 65.8
CSS0034099 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.3e-141 506.9 355 69.9
ATR0730G176 Amborella trichopoda HOM05D006813 ORTHO05D008657 1.7e-141 506.5 343 72.0
VMungo0464G0720 Vigna mungo HOM05D006813 ORTHO05D008657 1.7e-141 506.5 362 68.2
Actinidia06110 Actinidia chinensis HOM05D006813 ORTHO05D008657 3.0e-141 505.8 346 70.2
Cfa007604 Carpinus fangiana HOM05D006813 ORTHO05D008657 1.9e-140 503.1 358 69.3
Glyma.19G026800 Glycine max HOM05D006813 ORTHO05D008657 2.5e-140 502.7 346 70.5
Lj2g0012161 Lotus japonicus HOM05D006813 ORTHO05D008657 9.6e-140 500.7 376 67.0
Medtr6g013150 Medicago truncatula HOM05D006813 ORTHO05D008657 9.6e-140 500.7 377 66.3
CSS0013443 Camellia sinensis var. sinensis HOM05D006813 ORTHO05D008657 1.3e-139 500.4 374 65.8
Manes.02G049900 Manihot esculenta HOM05D006813 ORTHO05D008657 2.1e-139 499.6 356 69.1
Glyma.13G060100 Glycine max HOM05D006813 ORTHO05D008657 3.6e-139 498.8 364 67.3
Aqoxy3G03517 Aquilegia oxysepala HOM05D006813 ORTHO05D008657 4.8e-139 498.4 340 71.2
Lalb_Chr02g0159111 Lupinus albus HOM05D006813 ORTHO05D008657 6.2e-139 498.0 340 70.6
Atru.chr8.345 Acer truncatum HOM05D006813 ORTHO05D008657 1.4e-138 496.9 354 67.8
PGR004G2573 Punica granatum HOM05D006813 ORTHO05D008657 1.4e-138 496.9 359 67.4
Potri.004G120900 Populus trichocarpa HOM05D006813 ORTHO05D008657 1.8e-138 496.5 345 69.3
GSVIVG01011472001 Vitis vinifera HOM05D006813 ORTHO05D008657 2.0e-137 493.0 351 67.2
TWI34G0739 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 4.5e-137 491.9 342 69.3
HPP92_015887 Vanilla planifolia HOM05D006813 ORTHO05D008657 4.5e-137 491.9 347 69.5
RcHm_v2.0_Chr2g0166981 Rosa chinensis HOM05D006813 ORTHO05D008657 5.8e-137 491.5 375 65.9
arahy.Tifrunner.gnm1.ann1.GGC6H3 Arachis hypogaea HOM05D006813 ORTHO05D008657 7.6e-137 491.1 360 67.2
arahy.Tifrunner.gnm1.ann1.DSSH0H Arachis hypogaea HOM05D006813 ORTHO05D008657 9.9e-137 490.7 360 67.2
Actinidia01957 Actinidia chinensis HOM05D006813 ORTHO05D008657 1.3e-136 490.3 346 68.5
TWI34G0213 Tripterygium wilfordii HOM05D006813 ORTHO05D008657 1.3e-136 490.3 342 69.9
Phvul.004G032400 Phaseolus vulgaris HOM05D006813 ORTHO05D008657 1.7e-136 490.0 358 67.0
Sabra04G0067300 Salix brachista HOM05D006813 ORTHO05D008657 4.2e-135 485.3 366 65.6
FvH4_6g47790 Fragaria vesca HOM05D006813 ORTHO05D008657 5.4e-135 485.0 366 65.0
FAN14G3538 Fragaria x ananassa HOM05D006813 ORTHO05D008657 5.4e-135 485.0 366 65.0
Cc07_g03730 Coffea canephora HOM05D006813 ORTHO05D008657 9.3e-135 484.2 375 62.9
Nitab4.5_0000568g0240 Nicotiana tabacum HOM05D006813 ORTHO05D008657 1.2e-134 483.8 340 66.8
EL10Ac2g03036 Beta vulgaris HOM05D006813 ORTHO05D008657 2.1e-134 483.0 355 65.9
Nitab4.5_0001591g0010 Nicotiana tabacum HOM05D006813 ORTHO05D008657 2.1e-134 483.0 382 62.3
Thecc.04G088600 Theobroma cacao HOM05D006813 ORTHO05D008657 2.1e-134 483.0 367 64.3
Ciclev10013781m.g Citrus clementina HOM05D006813 ORTHO05D008657 2.7e-134 482.6 371 64.2
Gohir.A05G369200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 3.5e-134 482.3 367 63.8
Psat1g069960 Pisum sativum HOM05D006813 ORTHO05D008657 3.5e-134 482.3 381 63.0
AUR62034457 Chenopodium quinoa HOM05D006813 ORTHO05D008657 4.6e-134 481.9 363 64.7
DCAR_025399 Daucus carota HOM05D006813 ORTHO05D008657 4.6e-134 481.9 363 64.5
PSO063G1088 Papaver somniferum HOM05D006813 ORTHO05D008657 1.3e-133 480.3 344 66.9
CiPaw.03G021100 Carya illinoinensis HOM05D006813 ORTHO05D008657 2.3e-133 479.6 344 67.7
Gorai.012G051400 Gossypium raimondii HOM05D006813 ORTHO05D008657 2.3e-133 479.6 367 63.8
PSO063G3583 Papaver somniferum HOM05D006813 ORTHO05D008657 5.1e-133 478.4 344 67.2
MELO3C022015.2 Cucumis melo HOM05D006813 ORTHO05D008657 6.7e-133 478.0 365 64.9
MD09G1056700 Malus domestica HOM05D006813 ORTHO05D008657 6.7e-133 478.0 355 65.6
ECA232G0359 Erigeron canadensis HOM05D006813 ORTHO05D008657 8.7e-133 477.6 349 66.2
Gohir.D04G046200 Gossypium hirsutum HOM05D006813 ORTHO05D008657 8.7e-133 477.6 367 63.5
Solyc02g088350.4 Solanum lycopersicum HOM05D006813 ORTHO05D008657 1.9e-132 476.5 340 67.6
CAN.G206.184 Capsicum annuum HOM05D006813 ORTHO05D008657 2.5e-132 476.1 340 66.5
Sopen02g033040 Solanum pennellii HOM05D006813 ORTHO05D008657 4.3e-132 475.3 340 66.8
PGSC0003DMG400001435 Solanum tuberosum HOM05D006813 ORTHO05D008657 3.7e-131 472.2 340 66.2
ClCG11G004590 Citrullus lanatus HOM05D006813 ORTHO05D008657 8.1e-131 471.1 365 64.4
THA.LOC104805490 Tarenaya hassleriana HOM05D006813 ORTHO05D008657 8.1e-131 471.1 357 63.9
Lsat_1_v5_gn_4_170001 Lactuca sativa HOM05D006813 ORTHO05D008657 1.1e-130 470.7 345 67.2
HanXRQChr09g0264041 Helianthus annuus HOM05D006813 ORTHO05D008657 3.1e-130 469.2 344 66.9
CsaV3_5G038340 Cucumis sativus L. HOM05D006813 ORTHO05D008657 5.3e-130 468.4 342 66.4
SalBow1G5727 Salvia bowleyana HOM05D006813 ORTHO05D008657 1.5e-129 466.8 338 68.0
Duzib264G0095 Durio zibethinus HOM05D006813 ORTHO05D008657 2.0e-129 466.5 367 64.0
Rhsim10G0035200 Rhododendron simsii HOM05D006813 ORTHO05D008657 7.6e-129 464.5 342 66.1
AT3G29185 Arabidopsis thaliana HOM05D006813 ORTHO05D008657 2.2e-128 463.0 363 62.0
Os03g0758900 Oryza sativa ssp. japonica HOM05D006813 ORTHO05D008657 2.2e-128 463.0 347 65.1
Dinv33795 Davidia involucrata HOM05D006813 ORTHO05D008657 2.9e-128 462.6 309 71.2
CANSAT64G1527 Cannabis sativa HOM05D006813 ORTHO05D008657 4.9e-128 461.8 367 63.5
MSTRG.3341 Avicennia marina HOM05D006813 ORTHO05D008657 3.2e-127 459.1 355 64.5
MD17G1054200 Malus domestica HOM05D006813 ORTHO05D008657 3.2e-127 459.1 382 59.7
AL5G19100 Arabidopsis lyrata HOM05D006813 ORTHO05D008657 1.6e-126 456.8 358 61.7
BcaC06g30887 Brassica carinata HOM05D006813 ORTHO05D008657 1.0e-125 454.1 364 61.0
C07p38090 Brassica napus HOM05D006813 ORTHO05D008657 1.3e-125 453.8 363 60.6
BolC7t44331H Brassica oleracea HOM05D006813 ORTHO05D008657 1.3e-125 453.8 363 60.6
Thhalv10004355m.g Eutrema salsugineum HOM05D006813 ORTHO05D008657 2.3e-125 453.0 363 61.2
Sp2g17800 Schrenkiella parvula HOM05D006813 ORTHO05D008657 2.3e-125 453.0 363 59.8
BcaC06g33677 Brassica carinata HOM05D006813 ORTHO05D008657 1.9e-124 449.9 365 60.0
vmacro05678 Vaccinium macrocarpon HOM05D006813 ORTHO05D008657 1.9e-124 449.9 344 64.8
AUR62018125 Chenopodium quinoa HOM05D006813 ORTHO05D008657 2.5e-124 449.5 321 68.5
A06p40070 Brassica napus HOM05D006813 ORTHO05D008657 3.3e-124 449.1 363 60.3
BraA06t26922Z Brassica rapa HOM05D006813 ORTHO05D008657 3.3e-124 449.1 363 60.3
COL.COLO4_12242 Corchorus olitorius HOM05D006813 ORTHO05D008657 4.3e-124 448.7 317 68.5
Lju41A8T104 Lonicera japonica HOM05D006813 ORTHO05D008657 3.7e-123 445.7 371 60.6
Peaxi162Scf00166g00933 Petunia axillaris HOM05D006813 ORTHO05D008657 3.7e-123 445.7 318 66.7
Migut.K01297 Erythranthe guttata HOM05D006813 ORTHO05D008657 8.2e-123 444.5 350 63.1
Zm00001eb057930 Zea mays HOM05D006813 ORTHO05D008657 1.4e-122 443.7 345 64.6
Aa31LG2G4040 Aethionema arabicum HOM05D006813 ORTHO05D008657 2.4e-122 443.0 376 58.0
Hund13179 Selenicereus undatus HOM05D006813 ORTHO05D008657 4.0e-122 442.2 383 57.4
SGA_v2.0_scaffold154G37082 Striga asiatica HOM05D006813 ORTHO05D008657 2.9e-120 436.0 377 58.6
Oeu023718.1 Olea europaea HOM05D006813 ORTHO05D008657 1.1e-114 417.5 304 68.4
TPR.G26959 Trifolium pratense HOM05D006813 ORTHO05D008657 4.1e-114 415.6 296 68.2
Zm00001eb214510 Zea mays HOM05D006813 ORTHO05D008657 7.7e-113 411.4 352 60.5
unitig_0.g2631 Utricularia gibba HOM05D004633 ORTHO05D005503 1.5e-108 397.1 363 56.5
SEGI_06128 Sequoiadendron giganteum HOM05D006813 ORTHO05D008657 2.8e-107 392.9 357 54.6
CARHR152350 Cardamine hirsuta HOM05D006813 ORTHO05D008657 4.8e-107 392.1 353 57.2
Dinv11496 Davidia involucrata HOM05D006813 ORTHO05D008657 4.8e-99 365.5 269 66.5
Prupe.3G262000 Prunus persica HOM05D006813 ORTHO05D008657 1.2e-97 360.9 248 69.0
Sed0010301 Sechium edule HOM05D006813 ORTHO05D008657 2.0e-97 360.1 257 67.3
MBI07_g25549_MAGBIO Magnolia biondii HOM05D006813 ORTHO05D008657 2.6e-97 359.8 282 64.9
Carub.0005s0792 Capsella rubella HOM05D006813 ORTHO05D008657 6.5e-96 355.1 256 64.8
FAN05G4860 Fragaria x ananassa HOM05D006813 ORTHO05D008657 8.2e-91 338.2 313 56.9
Mapoly0015s0143 Marchantia polymorpha HOM05D006813 ORTHO05D008657 2.9e-88 329.7 337 49.6
SalBow1G0723 Salvia bowleyana HOM05D006813 ORTHO05D008657 5.5e-87 325.5 243 66.7
Pp3c27_2000 Physcomitrium patens HOM05D006813 ORTHO05D008657 4.0e-85 319.3 333 46.8
Ca_04860_v3 Cicer arietinum L. HOM05D006813 ORTHO05D002040 2.6e-84 316.6 384 46.6
Haze_14493 Corylus avellana HOM05D006813 ORTHO05D008657 3.8e-80 302.8 252 59.9
SMO347G0068 Selaginella moellendorffii HOM05D006813 ORTHO05D008657 1.5e-68 264.2 344 39.2
HPP92_015898 Vanilla planifolia HOM05D006813 ORTHO05D008657 1.0e-61 241.5 183 65.0
AagrBONN_evm.TU.Sc2ySwM_117.3657 Anthoceros agrestis HOM05D006813 ORTHO05D008657 1.8e-37 161.0 179 48.0
BcaC06g30885 Brassica carinata HOM05D006813 ORTHO05D008657 1.5e-36 157.9 125 56.8
FAN10G0034 Fragaria x ananassa HOM05D004096 ORTHO05D000898 1.0e-32 145.2 159 48.4
TPR.G26199 Trifolium pratense HOM05D006813 ORTHO05D001332 1.5e-31 141.4 86 73.3
HPP92_015897 Vanilla planifolia HOM05D006813 ORTHO05D008657 5.6e-31 139.4 101 66.3
SalBow1G7870 Salvia bowleyana HOM05D006813 ORTHO05D008657 2.1e-30 137.5 91 72.5
MD09G1057100 Malus domestica HOM05D006813 ORTHO05D008657 4.8e-30 136.3 150 49.3
HanXRQChr08g0223741 Helianthus annuus HOM05D006813 ORTHO05D008657 1.0e-16 92.0 85 54.1
ECA247G1425 Erigeron canadensis HOM05D006813 ORTHO05D008657 8.1e-14 82.4 50 68.0
TAR633G2432 Trochodendron aralioides HOM05D006813 ORTHO05D414814 4.5e-12 76.6 93 47.3


User provided reference genes

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