Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0695 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 8.7e-120 434.1 299 100.0
MBI05_g43168_MAGBIO Magnolia biondii HOM05D005571 ORTHO05D006919 4.4e-23 112.8 152 50.0
TAR628G0603 Trochodendron aralioides HOM05D005571 ORTHO05D006919 1.2e-17 94.7 177 42.9
Manes.18G005301 Manihot esculenta HOM05D005571 ORTHO05D006919 2.1e-17 94.0 164 42.7
Nn6g31737 Nelumbo nucifera HOM05D005571 ORTHO05D006919 2.8e-17 93.6 157 47.1
Aqoxy6G01708 Aquilegia oxysepala HOM05D005571 ORTHO05D006919 1.8e-16 90.9 195 38.5
Thecc.08G059400 Theobroma cacao HOM05D005571 ORTHO05D006919 1.3e-14 84.7 199 36.7
Manes.05G133900 Manihot esculenta HOM05D005571 ORTHO05D006919 3.8e-14 83.2 174 40.2
Dinv05532 Davidia involucrata HOM05D005571 ORTHO05D006919 1.1e-13 81.6 171 38.6
Duzib093G0863 Durio zibethinus HOM05D005571 ORTHO05D006919 1.9e-13 80.9 164 39.0
PSO675G2006 Papaver somniferum HOM05D005571 ORTHO05D006919 1.9e-13 80.9 171 38.6
Potri.002G010400 Populus trichocarpa HOM05D005571 ORTHO05D006919 3.2e-13 80.1 166 39.8
CDE05G1909 Ceratophyllum demersum HOM05D005571 ORTHO05D006919 4.2e-13 79.7 157 38.9
HPP92_021048 Vanilla planifolia HOM05D005571 ORTHO05D006919 4.2e-13 79.7 184 37.5
Actinidia17042 Actinidia chinensis HOM05D005571 ORTHO05D006919 5.4e-13 79.3 165 35.2
CSS0030992 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 7.1e-13 79.0 180 37.2
DCAR_009532 Daucus carota HOM05D005571 ORTHO05D006919 7.1e-13 79.0 156 41.0
PSO541G4697 Papaver somniferum HOM05D005571 ORTHO05D006919 7.1e-13 79.0 171 38.6
TWI56G1114 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 7.1e-13 79.0 151 41.7
FAN27G2782 Fragaria x ananassa HOM05D005571 ORTHO05D006919 9.2e-13 78.6 181 38.7
FvH4_2g37430 Fragaria vesca HOM05D005571 ORTHO05D006919 1.2e-12 78.2 196 38.3
QL02p014184 Quercus lobata HOM05D005571 ORTHO05D006919 2.1e-12 77.4 183 37.2
FAN20G2818 Fragaria x ananassa HOM05D005571 ORTHO05D006919 3.5e-12 76.6 192 37.0
FAN15G1374 Fragaria x ananassa HOM05D005571 ORTHO05D006919 7.8e-12 75.5 170 40.0
Actinidia15492 Actinidia chinensis HOM05D005571 ORTHO05D006919 1.0e-11 75.1 166 38.0
Ciclev10002509m.g Citrus clementina HOM05D005571 ORTHO05D006919 1.3e-11 74.7 179 35.2
Cc10_g00650 Coffea canephora HOM05D005571 ORTHO05D006919 1.3e-11 74.7 176 33.5
Nitab4.5_0000588g0080 Nicotiana tabacum HOM05D005571 ORTHO05D006919 1.3e-11 74.7 154 41.6
ClCG08G009410 Citrullus lanatus HOM05D005571 ORTHO05D006919 1.7e-11 74.3 162 37.7
COL.COLO4_05218 Corchorus olitorius HOM05D005571 ORTHO05D006919 1.7e-11 74.3 195 33.3
Lj1g0015612 Lotus japonicus HOM05D005571 ORTHO05D006919 3.0e-11 73.6 163 36.2
RcHm_v2.0_Chr6g0304291 Rosa chinensis HOM05D005571 ORTHO05D006919 3.0e-11 73.6 166 38.0
Cfa014080 Carpinus fangiana HOM05D005571 ORTHO05D006919 3.9e-11 73.2 137 40.9
Haze_22782 Corylus avellana HOM05D005571 ORTHO05D006919 3.9e-11 73.2 178 37.1
PGSC0003DMG400009903 Solanum tuberosum HOM05D005571 ORTHO05D006919 3.9e-11 73.2 195 35.9
Potri.005G250800 Populus trichocarpa HOM05D005571 ORTHO05D006919 5.1e-11 72.8 187 36.9
MELO3C026535.2 Cucumis melo HOM05D005571 ORTHO05D006919 6.6e-11 72.4 165 36.4
Peaxi162Scf00893g00005 Petunia axillaris HOM05D005571 ORTHO05D006919 8.7e-11 72.0 183 38.3
Sabra02G0007800 Salix brachista HOM05D005571 ORTHO05D006919 8.7e-11 72.0 180 36.1
GSVIVG01008671001 Vitis vinifera HOM05D005571 ORTHO05D006919 8.7e-11 72.0 147 43.5
Phvul.009G010900 Phaseolus vulgaris HOM05D005571 ORTHO05D006919 1.5e-10 71.2 150 38.7
Oeu035840.1 Olea europaea HOM05D005571 ORTHO05D006919 1.9e-10 70.9 167 37.1
Rhsim06G0007100 Rhododendron simsii HOM05D005571 ORTHO05D006919 1.9e-10 70.9 191 36.1
CiPaw.08G073400 Carya illinoinensis HOM05D005571 ORTHO05D006919 2.5e-10 70.5 184 35.3
Sabra05G0194000 Salix brachista HOM05D005571 ORTHO05D006919 2.5e-10 70.5 184 37.0
Sopen04g035980 Solanum pennellii HOM05D005571 ORTHO05D006919 2.5e-10 70.5 179 36.9
CiPaw.07G138600 Carya illinoinensis HOM05D005571 ORTHO05D006919 3.3e-10 70.1 170 36.5
CAN.G311.116 Capsicum annuum HOM05D005571 ORTHO05D006919 4.3e-10 69.7 185 37.3
CsaV3_6G031520 Cucumis sativus L. HOM05D005571 ORTHO05D006919 4.3e-10 69.7 163 35.6
Duzib116G0932 Durio zibethinus HOM05D005571 ORTHO05D006919 4.3e-10 69.7 155 38.1
Oeu064631.1 Olea europaea HOM05D005571 ORTHO05D006919 4.3e-10 69.7 167 38.9
VMungo1309G0957 Vigna mungo HOM05D005571 ORTHO05D006919 4.3e-10 69.7 175 36.0
AL8G19260 Arabidopsis lyrata HOM05D005571 ORTHO05D006919 5.6e-10 69.3 162 34.0
vmacro21809 Vaccinium macrocarpon HOM05D005571 ORTHO05D006919 7.3e-10 68.9 153 37.9
Medtr3g115300 Medicago truncatula HOM05D005571 ORTHO05D006919 9.6e-10 68.6 169 36.7
PGR083G0609 Punica granatum HOM05D005571 ORTHO05D006919 9.6e-10 68.6 157 36.9
Ca_15432_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.3e-09 68.2 156 35.9
Ca_15457_v3 Cicer arietinum L. HOM05D005571 ORTHO05D006919 1.3e-09 68.2 156 35.9
Hma1.2p1_0157F.1_g069390 Hydrangea macrophylla HOM05D005571 ORTHO05D006919 2.1e-09 67.4 186 33.9
Lalb_Chr23g0265781 Lupinus albus HOM05D005571 ORTHO05D006919 2.1e-09 67.4 191 36.1
Oeu000692.1 Olea europaea HOM05D005571 ORTHO05D006919 2.1e-09 67.4 157 36.3
Gohir.A05G179400 Gossypium hirsutum HOM05D005571 ORTHO05D006919 2.8e-09 67.0 167 36.5
Ah.11g041150 Amaranthus hybridus HOM05D005571 ORTHO05D006919 3.6e-09 66.6 186 31.2
MSTRG.24929 Avicennia marina HOM05D005571 ORTHO05D006919 4.8e-09 66.2 191 35.6
CSS0029462 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.8e-09 66.2 187 33.2
CSS0039739 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 4.8e-09 66.2 172 36.0
Gohir.D05G182600 Gossypium hirsutum HOM05D005571 ORTHO05D006919 4.8e-09 66.2 167 37.1
Gorai.009G187900 Gossypium raimondii HOM05D005571 ORTHO05D006919 4.8e-09 66.2 167 37.1
Atru.chr13.137 Acer truncatum HOM05D005571 ORTHO05D006919 6.2e-09 65.9 107 44.9
Hund01764 Selenicereus undatus HOM05D005571 ORTHO05D006919 6.2e-09 65.9 146 36.3
TPR.G38112 Trifolium pratense HOM05D005571 ORTHO05D006919 8.1e-09 65.5 170 35.3
Glyma.04G017800 Glycine max HOM05D005571 ORTHO05D006919 1.4e-08 64.7 148 38.5
SGA_v2.0_scaffold133G34635 Striga asiatica HOM05D005571 ORTHO05D006919 1.4e-08 64.7 162 38.3
Glyma.06G018100 Glycine max HOM05D005571 ORTHO05D006919 1.8e-08 64.3 149 36.9
Lj4A11T70 Lonicera japonica HOM05D005571 ORTHO05D006919 1.8e-08 64.3 174 35.1
CSS0038566 Camellia sinensis var. sinensis HOM05D005571 ORTHO05D006919 2.4e-08 63.9 176 39.8
SalBow5G5667 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.4e-08 63.9 167 37.1
SalBow7G0698 Salvia bowleyana HOM05D005571 ORTHO05D006919 2.4e-08 63.9 167 37.1
AT5G42330 Arabidopsis thaliana HOM05D005571 ORTHO05D006919 6.9e-08 62.4 144 36.8
Cfa012650 Carpinus fangiana HOM05D005571 ORTHO05D006919 6.9e-08 62.4 129 39.5
Migut.C00385 Erythranthe guttata HOM05D005571 ORTHO05D006919 6.9e-08 62.4 160 40.0
TWI12G0392 Tripterygium wilfordii HOM05D005571 ORTHO05D006919 6.9e-08 62.4 149 37.6
Sed0002015 Sechium edule HOM05D005571 ORTHO05D006919 1.2e-07 61.6 184 33.2
HanXRQChr14g0428071 Helianthus annuus HOM05D005571 ORTHO05D006919 1.5e-07 61.2 186 33.3
THA.LOC104825425 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 3.4e-07 60.1 125 34.4
SHI42933 Sapria himalayana HOM05D005571 ORTHO05D006919 4.4e-07 59.7 160 33.8
ECA238G3324 Erigeron canadensis HOM05D005571 ORTHO05D007881 7.6e-07 58.9 94 43.6
THA.LOC104813174 Tarenaya hassleriana HOM05D005571 ORTHO05D006919 7.6e-07 58.9 182 35.7
arahy.Tifrunner.gnm1.ann1.G9B5FS Arachis hypogaea HOM05D005571 ORTHO05D006919 9.9e-07 58.5 170 32.4
BcaB08g36584 Brassica carinata HOM05D005571 ORTHO05D006919 9.9e-07 58.5 148 35.1
Lsat_1_v5_gn_2_4041 Lactuca sativa HOM05D005571 ORTHO05D006919 9.9e-07 58.5 144 36.8
Aa31LG9G12460 Aethionema arabicum HOM05D005571 ORTHO05D006919 2.9e-06 57.0 122 39.3
arahy.Tifrunner.gnm1.ann1.VC4QUA Arachis hypogaea HOM05D005571 ORTHO05D006919 2.9e-06 57.0 166 32.5
unitig_747.g21542 Utricularia gibba HOM05D005571 ORTHO05D006919 3.8e-06 56.6 184 34.2
Psat0s2670g0120 Pisum sativum HOM05D005571 ORTHO05D006919 4.9e-06 56.2 170 37.1
EL10Ac1g01953 Beta vulgaris HOM05D005571 ORTHO05D006919 8.4e-06 55.5 121 34.7


User provided reference genes

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