Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0678 Ceratophyllum demersum HOM05D005983 ORTHO05D007438 1.0e-96 356.7 176 100.0
GSVIVG01004724001 Vitis vinifera HOM05D005983 ORTHO05D007438 1.4e-48 196.8 165 60.6
MBI04_g09520_MAGBIO Magnolia biondii HOM05D005983 ORTHO05D007438 4.0e-48 195.3 171 59.1
TAR713G0001 Trochodendron aralioides HOM05D005983 ORTHO05D007438 1.3e-46 190.3 164 58.5
ATR0317G025 Amborella trichopoda HOM05D005983 ORTHO05D007438 1.7e-46 189.9 159 59.7
COL.COLO4_37146 Corchorus olitorius HOM05D005983 ORTHO05D007438 2.9e-46 189.1 143 63.6
QL12p011684 Quercus lobata HOM05D005983 ORTHO05D007438 6.4e-46 188.0 168 60.1
arahy.Tifrunner.gnm1.ann1.0NSC2B Arachis hypogaea HOM05D005983 ORTHO05D007438 1.4e-45 186.8 162 56.8
Ciclev10020120m.g Citrus clementina HOM05D005983 ORTHO05D007438 2.4e-45 186.0 145 62.1
arahy.Tifrunner.gnm1.ann1.NE97L5 Arachis hypogaea HOM05D005983 ORTHO05D007438 3.2e-45 185.7 162 56.2
Glyma.01G207800 Glycine max HOM05D005983 ORTHO05D007438 4.1e-45 185.3 163 56.4
Hma1.2p1_0316F.1_g122960 Hydrangea macrophylla HOM05D005983 ORTHO05D007438 7.0e-45 184.5 146 59.6
Nn1g00952 Nelumbo nucifera HOM05D005983 ORTHO05D007438 1.2e-44 183.7 165 57.0
Haze_01067 Corylus avellana HOM05D005983 ORTHO05D007438 1.6e-44 183.3 168 57.7
Lj2g0002324 Lotus japonicus HOM05D005983 ORTHO05D007438 1.6e-44 183.3 164 57.3
CANSAT21G0098 Cannabis sativa HOM05D005983 ORTHO05D007438 2.0e-44 183.0 173 56.6
CiPaw.11G080800 Carya illinoinensis HOM05D005983 ORTHO05D007438 2.7e-44 182.6 169 58.6
Duzib084G0278 Durio zibethinus HOM05D005983 ORTHO05D007438 2.7e-44 182.6 152 58.6
CSS0015193 Camellia sinensis var. sinensis HOM05D005983 ORTHO05D007438 3.5e-44 182.2 168 56.5
Sc01g0008340 Simmondsia chinensis HOM05D005983 ORTHO05D007438 4.6e-44 181.8 164 57.3
Ca_24588_v3 Cicer arietinum L. HOM05D005983 ORTHO05D007438 1.0e-43 180.6 141 63.1
Duzib205G1394 Durio zibethinus HOM05D005983 ORTHO05D007438 1.0e-43 180.6 136 62.5
Gorai.003G172200 Gossypium raimondii HOM05D005983 ORTHO05D007438 1.3e-43 180.3 141 61.0
Migut.A01119 Erythranthe guttata HOM05D005983 ORTHO05D007438 1.7e-43 179.9 172 57.0
Gohir.D03G163500 Gossypium hirsutum HOM05D005983 ORTHO05D007438 2.3e-43 179.5 141 61.0
Eucgr.E00410 Eucalyptus grandis HOM05D005983 ORTHO05D007438 3.0e-43 179.1 123 66.7
TPR.G18111 Trifolium pratense HOM05D005983 ORTHO05D007438 5.0e-43 178.3 170 56.5
Actinidia02145 Actinidia chinensis HOM05D005983 ORTHO05D007438 6.6e-43 177.9 157 57.3
Phvul.002G057200 Phaseolus vulgaris HOM05D005983 ORTHO05D007438 6.6e-43 177.9 151 57.0
Atru.chr9.1290 Acer truncatum HOM05D005983 ORTHO05D007438 8.6e-43 177.6 161 56.5
Thecc.03G249100 Theobroma cacao HOM05D005983 ORTHO05D007438 1.1e-42 177.2 146 61.6
SalBow6G6019 Salvia bowleyana HOM05D005983 ORTHO05D007438 1.5e-42 176.8 155 58.1
Lalb_Chr05g0214371 Lupinus albus HOM05D005983 ORTHO05D007438 1.9e-42 176.4 165 51.5
Cpa.g.sc29.178 Carica papaya HOM05D005983 ORTHO05D007438 2.5e-42 176.0 160 56.9
Aqoxy5G03845 Aquilegia oxysepala HOM05D005983 ORTHO05D007438 3.3e-42 175.6 170 51.8
MELO3C005523.2 Cucumis melo HOM05D005983 ORTHO05D007438 3.3e-42 175.6 170 56.5
Psat2g176840 Pisum sativum HOM05D005983 ORTHO05D007438 7.3e-42 174.5 165 54.5
TWI15G0813 Tripterygium wilfordii HOM05D005983 ORTHO05D007438 7.3e-42 174.5 163 58.3
VMungo1215G0088 Vigna mungo HOM05D005983 ORTHO05D007438 7.3e-42 174.5 138 58.0
Potri.003G078300 Populus trichocarpa HOM05D005983 ORTHO05D007438 9.5e-42 174.1 160 57.5
ClCG01G004150 Citrullus lanatus HOM05D005983 ORTHO05D007438 1.6e-41 173.3 170 55.3
Gohir.A03G007500 Gossypium hirsutum HOM05D005983 ORTHO05D007438 1.6e-41 173.3 141 59.6
Carub.0007s2469 Capsella rubella HOM05D005983 ORTHO05D007438 3.6e-41 172.2 147 58.5
PGR042G2168 Punica granatum HOM05D005983 ORTHO05D007438 4.7e-41 171.8 125 65.6
Hund14571 Selenicereus undatus HOM05D005983 ORTHO05D007438 4.7e-41 171.8 143 59.4
Thhalv10025592m.g Eutrema salsugineum HOM05D005983 ORTHO05D007438 8.1e-41 171.0 161 54.7
PGSC0003DMG402011882 Solanum tuberosum HOM05D005983 ORTHO05D007438 8.1e-41 171.0 171 54.4
MD06G1055900 Malus domestica HOM05D005983 ORTHO05D007438 1.1e-40 170.6 162 55.6
Medtr5g012880 Medicago truncatula HOM05D005983 ORTHO05D007438 1.1e-40 170.6 167 55.1
Prupe.5G066800 Prunus persica HOM05D005983 ORTHO05D007438 1.1e-40 170.6 155 56.8
Sed0018188 Sechium edule HOM05D005983 ORTHO05D007438 1.1e-40 170.6 156 57.7
AT4G16700 Arabidopsis thaliana HOM05D005983 ORTHO05D007438 1.4e-40 170.2 115 68.7
SGA_v2.0_scaffold104G30169 Striga asiatica HOM05D005983 ORTHO05D007438 1.4e-40 170.2 136 59.6
Cc08_g12250 Coffea canephora HOM05D005983 ORTHO05D007438 1.8e-40 169.9 162 52.5
Solyc06g060780.4 Solanum lycopersicum HOM05D005983 ORTHO05D007438 1.8e-40 169.9 171 53.8
Sopen06g020900 Solanum pennellii HOM05D005983 ORTHO05D007438 1.8e-40 169.9 171 53.8
AL7G38030 Arabidopsis lyrata HOM05D005983 ORTHO05D007438 2.3e-40 169.5 170 51.2
CARHR223230 Cardamine hirsuta HOM05D005983 ORTHO05D007438 4.0e-40 168.7 147 57.1
HanXRQChr16g0510961 Helianthus annuus HOM05D005983 ORTHO05D007438 4.0e-40 168.7 160 51.9
Sabra03G0048600 Salix brachista HOM05D005983 ORTHO05D007438 4.0e-40 168.7 161 55.9
PSO357G0330 Papaver somniferum HOM05D005983 ORTHO05D007438 1.2e-39 167.2 118 63.6
ECA233G1798 Erigeron canadensis HOM05D005983 ORTHO05D007438 1.5e-39 166.8 115 66.1
Sed0010070 Sechium edule HOM05D005983 ORTHO05D007438 2.0e-39 166.4 170 54.1
BcaC09g50403 Brassica carinata HOM05D005983 ORTHO05D007438 2.6e-39 166.0 137 58.4
A01p20580 Brassica napus HOM05D005983 ORTHO05D007438 2.6e-39 166.0 137 58.4
C01p25880 Brassica napus HOM05D005983 ORTHO05D007438 2.6e-39 166.0 137 58.4
BolC1t02533H Brassica oleracea HOM05D005983 ORTHO05D007438 2.6e-39 166.0 137 58.4
BraA01t01986Z Brassica rapa HOM05D005983 ORTHO05D007438 2.6e-39 166.0 137 58.4
DCAR_004965 Daucus carota HOM05D005983 ORTHO05D007438 2.6e-39 166.0 167 53.3
Nitab4.5_0000618g0100 Nicotiana tabacum HOM05D005983 ORTHO05D007438 2.6e-39 166.0 146 58.2
Lj2A220G37 Lonicera japonica HOM05D005983 ORTHO05D007438 4.4e-39 165.2 111 66.7
Aa31LG2G12890 Aethionema arabicum HOM05D005983 ORTHO05D007438 5.8e-39 164.9 115 65.2
PSO170G1657 Papaver somniferum HOM05D005983 ORTHO05D007438 5.8e-39 164.9 118 62.7
Peaxi162Scf01022g00324 Petunia axillaris HOM05D005983 ORTHO05D007438 7.5e-39 164.5 145 57.9
BcaNung00159 Brassica carinata HOM05D005983 ORTHO05D007438 1.3e-38 163.7 137 57.7
Sp7g15340 Schrenkiella parvula HOM05D005983 ORTHO05D007438 1.3e-38 163.7 156 54.5
CAN.G62.33 Capsicum annuum HOM05D005983 ORTHO05D007438 2.2e-38 162.9 167 52.7
Lsat_1_v5_gn_6_18021 Lactuca sativa HOM05D005983 ORTHO05D007438 9.2e-37 157.5 146 56.2
RcHm_v2.0_Chr7g0203641 Rosa chinensis HOM05D005983 ORTHO05D007438 1.2e-36 157.1 163 54.0
unitig_744.g24471 Utricularia gibba HOM05D005983 ORTHO05D007438 1.2e-36 157.1 117 59.8
FAN08G1502 Fragaria x ananassa HOM05D005983 ORTHO05D007438 2.1e-36 156.4 163 54.0
FAN04G1995 Fragaria x ananassa HOM05D005983 ORTHO05D007438 6.0e-36 154.8 163 53.4
FvH4_5g19150 Fragaria vesca HOM05D005983 ORTHO05D007438 3.0e-35 152.5 163 52.8
FAN18G0274 Fragaria x ananassa HOM05D005983 ORTHO05D007438 3.0e-35 152.5 163 52.8
Manes.01G082200 Manihot esculenta HOM05D005983 ORTHO05D007438 6.6e-35 151.4 100 69.0
Os03g0101900 Oryza sativa ssp. japonica HOM05D005983 ORTHO05D007438 6.6e-35 151.4 139 52.5
CsaV3_5G004310 Cucumis sativus L. HOM05D005983 ORTHO05D007438 1.9e-34 149.8 100 69.0
EL10Ac5g12377 Beta vulgaris HOM05D005983 ORTHO05D007438 9.5e-34 147.5 211 43.6
Pp3c10_660 Physcomitrium patens HOM05D005983 ORTHO05D007438 4.0e-32 142.1 133 50.4
Actinidia14414 Actinidia chinensis HOM05D005983 ORTHO05D007438 1.2e-31 140.6 151 50.3
Dinv21647 Davidia involucrata HOM05D005983 ORTHO05D007438 4.4e-31 138.7 143 51.0
Mapoly0144s0014 Marchantia polymorpha HOM05D005983 ORTHO05D007438 1.3e-30 137.1 115 53.0
SMO351G0559 Selaginella moellendorffii HOM05D005983 ORTHO05D007438 2.2e-30 136.3 103 59.2
Rhsim01G0100800 Rhododendron simsii HOM05D005983 ORTHO05D007438 2.4e-29 132.9 252 33.7
Ah.12g054210 Amaranthus hybridus HOM05D005983 ORTHO05D007438 1.6e-28 130.2 166 48.2
AUR62007103 Chenopodium quinoa HOM05D005983 ORTHO05D007438 4.6e-28 128.6 135 54.1
AUR62019966 Chenopodium quinoa HOM05D005983 ORTHO05D007438 4.6e-28 128.6 135 54.8
HPP92_015120 Vanilla planifolia HOM05D005983 ORTHO05D007438 1.3e-22 110.5 85 60.0
vmacro00190 Vaccinium macrocarpon HOM05D005983 ORTHO05D007438 2.2e-22 109.8 104 56.7
SEGI_40726 Sequoiadendron giganteum HOM05D005983 ORTHO05D007438 8.4e-22 107.8 86 60.5
CBR_g40206 Chara braunii HOM05D005983 ORTHO05D007438 4.3e-18 95.5 134 40.3
THA.LOC104815498 Tarenaya hassleriana HOM05D005983 ORTHO05D007438 5.6e-10 68.6 141 34.0
SHI02535 Sapria himalayana HOM05D005983 ORTHO05D007438 6.2e-09 65.1 57 59.6
RcHm_v2.0_Chr7g0203671 Rosa chinensis HOM05D005983 ORTHO05D007438 2.4e-08 63.2 100 39.0
Lsat_1_v5_gn_4_25380 Lactuca sativa HOM05D005983 ORTHO05D007438 4.0e-08 62.4 43 60.5


User provided reference genes

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