Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 3.2e-78 295.0 150 100.0
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 6.0e-53 211.1 150 69.3
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 6.6e-52 207.6 146 67.8
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 2.5e-51 205.7 146 68.5
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 9.6e-51 203.8 149 67.1
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 1.4e-49 199.9 146 65.8
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 2.4e-49 199.1 148 64.2
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 3.1e-49 198.7 146 65.1
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 3.1e-49 198.7 178 60.7
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 3.1e-49 198.7 148 66.2
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 3.1e-49 198.7 149 64.4
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 5.2e-49 198.0 147 65.3
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 9.0e-49 197.2 146 65.8
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 9.0e-49 197.2 149 63.8
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 2.6e-48 195.7 146 65.8
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 3.4e-48 195.3 146 65.8
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 3.4e-48 195.3 156 63.5
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 3.4e-48 195.3 149 63.1
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 4.4e-48 194.9 146 65.1
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 9.9e-48 193.7 146 63.0
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 9.9e-48 193.7 146 63.7
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 9.9e-48 193.7 146 64.4
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 9.9e-48 193.7 142 66.2
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 2.9e-47 192.2 142 64.8
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 2.9e-47 192.2 142 66.2
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 4.9e-47 191.4 146 64.4
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 6.4e-47 191.0 149 62.4
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 6.4e-47 191.0 146 64.4
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 8.4e-47 190.7 146 64.4
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 2.4e-46 189.1 142 64.8
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 3.2e-46 188.7 146 63.0
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 9.3e-46 187.2 147 63.3
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 3.5e-45 185.3 147 58.5
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 4.6e-45 184.9 148 60.8
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 6.0e-45 184.5 144 61.8
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 1.3e-44 183.3 148 60.8
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 3.9e-44 181.8 147 59.2
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 5.1e-44 181.4 146 63.0
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 6.6e-44 181.0 170 57.1
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 2.5e-43 179.1 146 61.6
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 5.6e-43 177.9 143 60.1
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 7.3e-43 177.6 148 60.1
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 7.3e-43 177.6 146 58.2
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 9.6e-43 177.2 148 58.1
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 9.6e-43 177.2 149 56.4
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 1.6e-42 176.4 146 57.5
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 2.8e-42 175.6 143 60.8
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 2.8e-42 175.6 146 57.5
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 2.8e-42 175.6 146 58.2
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 3.6e-42 175.3 151 55.0
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 6.2e-42 174.5 144 56.9
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 8.1e-42 174.1 145 57.2
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 8.1e-42 174.1 147 61.2
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 1.1e-41 173.7 144 59.0
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 1.1e-41 173.7 146 59.6
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 1.4e-41 173.3 142 57.0
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 1.8e-41 172.9 130 65.4
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.8e-41 172.9 164 54.9
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 1.8e-41 172.9 146 58.2
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 4.0e-41 171.8 148 55.4
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 1.5e-40 169.9 142 57.7
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 2.0e-40 169.5 122 66.4
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 2.6e-40 169.1 146 57.5
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 1.3e-39 166.8 146 58.2
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 1.7e-39 166.4 168 51.8
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 1.7e-39 166.4 144 56.9
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 1.7e-39 166.4 122 63.9
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 2.2e-39 166.0 148 55.4
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 3.8e-39 165.2 147 56.5
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 4.9e-39 164.9 120 65.0
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 8.4e-39 164.1 146 53.4
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 1.4e-38 163.3 146 55.5
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 1.4e-38 163.3 146 55.5
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 1.4e-38 163.3 146 55.5
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 1.9e-38 162.9 146 56.2
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 1.9e-38 162.9 149 55.0
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 5.4e-38 161.4 146 55.5
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 3.5e-37 158.7 146 54.8
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 3.5e-37 158.7 146 54.8
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 3.5e-37 158.7 146 54.8
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 7.9e-37 157.5 146 53.4
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 7.9e-37 157.5 120 62.5
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 3.9e-36 155.2 121 62.0
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 1.5e-35 153.3 148 50.7
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 3.3e-35 152.1 108 66.7
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 1.4e-33 146.7 122 59.0
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 2.6e-32 142.5 127 55.1
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 5.8e-32 141.4 98 67.3
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 1.3e-31 140.2 109 59.6
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 2.2e-31 139.4 151 50.3
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 2.9e-31 139.0 111 60.4
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 1.1e-30 137.1 111 60.4
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 1.9e-30 136.3 124 56.5
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 2.4e-30 136.0 108 61.1
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 5.1e-28 128.3 112 54.5
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 8.7e-28 127.5 147 47.6
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 5.6e-27 124.8 104 56.7
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 1.3e-26 123.6 142 43.7
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 1.3e-23 113.6 143 39.2
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 2.9e-23 112.5 134 42.5
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 8.4e-23 110.9 127 43.3
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 1.2e-21 107.1 80 65.0
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 2.1e-21 106.3 83 60.2
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 1.8e-20 103.2 124 39.5
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 2.5e-19 99.4 67 68.7
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 5.7e-19 98.2 68 67.6
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 7.4e-19 97.8 122 37.7
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 8.2e-18 94.4 71 59.2
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 1.4e-17 93.6 66 65.2
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 3.1e-17 92.4 87 52.9
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 3.1e-17 92.4 71 62.0
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 5.0e-15 85.1 82 52.4
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 1.2e-13 80.5 97 43.3
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 4.8e-10 68.6 68 50.0
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 5.0e-07 58.5 57 50.9
Cre03.g201500 Chlamydomonas reinhardtii HOM05D006886 ORTHO05D008494 8.5e-07 57.8 119 26.1


User provided reference genes

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