Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0645 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 4.4e-171 604.7 353 100.0
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 1.5e-25 121.3 263 35.4
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 6.2e-24 115.9 323 32.5
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 1.2e-22 111.7 267 31.5
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 1.9e-20 104.4 261 31.0
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 4.6e-19 99.8 266 30.5
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 6.0e-19 99.4 246 32.5
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.0e-18 98.6 249 32.5
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 1.3e-18 98.2 261 30.3
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.7e-18 97.8 249 32.5
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 3.9e-18 96.7 249 31.3
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 1.1e-17 95.1 258 29.8
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 2.5e-17 94.0 304 27.6
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 5.6e-17 92.8 258 29.5
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 5.6e-17 92.8 256 32.0
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 1.6e-16 91.3 255 28.6
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 3.6e-16 90.1 253 30.0
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 8.1e-16 89.0 305 28.9
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 1.1e-15 88.6 255 29.4
CDE04G1248 Ceratophyllum demersum HOM05D006757 ORTHO05D004651 1.8e-15 87.8 85 58.8
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 4.0e-15 86.7 247 28.7
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 8.9e-15 85.5 246 26.8
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 1.5e-14 84.7 257 29.2
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 1.5e-14 84.7 245 24.9
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 1.5e-14 84.7 258 31.8
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 2.0e-14 84.3 264 28.8
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 4.4e-14 83.2 250 29.6
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 4.4e-14 83.2 310 25.8
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 4.4e-14 83.2 304 27.6
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 5.8e-14 82.8 253 25.7
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 1.3e-13 81.6 256 30.9
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 2.9e-13 80.5 244 29.9
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 2.9e-13 80.5 262 29.4
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 3.8e-13 80.1 265 27.9
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 3.8e-13 80.1 304 27.6
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 4.9e-13 79.7 256 27.7
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 1.1e-12 78.6 265 27.9
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.4e-12 78.2 250 26.0
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 1.9e-12 77.8 257 29.2
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 1.9e-12 77.8 244 26.6
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 3.2e-12 77.0 253 26.9
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 3.2e-12 77.0 253 26.9
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 5.4e-12 76.3 255 27.8
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 7.1e-12 75.9 258 27.9
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 4.6e-11 73.2 299 23.4
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 7.8e-11 72.4 249 26.1
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 1.0e-10 72.0 237 27.4
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 1.0e-10 72.0 255 27.5
SEGI_38740 Sequoiadendron giganteum HOM05D006757 ORTHO05D004651 1.3e-10 71.6 205 28.3
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 5.1e-10 69.7 254 25.6
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 5.1e-10 69.7 315 24.4
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 2.5e-09 67.4 241 26.6
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 4.3e-09 66.6 313 24.0
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 1.2e-08 65.1 280 22.1
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 3.6e-08 63.5 307 24.1
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.6e-08 63.5 153 27.5
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 4.7e-08 63.2 130 33.1
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 6.2e-08 62.8 241 24.1
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 8.1e-08 62.4 306 28.1
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 1.8e-07 61.2 236 24.6
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 1.8e-07 61.2 306 22.2
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 2.4e-07 60.8 144 30.6
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.2e-06 58.5 249 26.9


User provided reference genes

Program Settings