Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0616 Ceratophyllum demersum HOM05D005879 ORTHO05D007432 3.6e-175 618.2 331 100.0
Nn2g14007 Nelumbo nucifera HOM05D005879 ORTHO05D007432 2.7e-106 389.4 352 58.5
PSO339G2019 Papaver somniferum HOM05D005879 ORTHO05D007432 4.8e-103 378.6 362 53.9
PSO801G0022 Papaver somniferum HOM05D005879 ORTHO05D007432 2.4e-102 376.3 362 53.9
TAR381G0927 Trochodendron aralioides HOM05D005879 ORTHO05D007432 1.2e-101 374.0 355 55.8
Dinv21896 Davidia involucrata HOM05D005879 ORTHO05D007432 6.3e-95 351.7 349 52.1
PSO170G2230 Papaver somniferum HOM05D005879 ORTHO05D007432 2.0e-93 346.7 348 53.4
Aqoxy3G00238 Aquilegia oxysepala HOM05D005879 ORTHO05D007432 2.2e-92 343.2 352 52.0
MBI05_g37046_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 5.7e-88 328.6 378 49.2
THA.LOC104807688 Tarenaya hassleriana HOM05D005879 ORTHO05D007432 6.3e-87 325.1 349 49.9
Lalb_Chr06g0163471 Lupinus albus HOM05D005879 ORTHO05D007432 2.6e-85 319.7 350 49.7
Gohir.A11G202400 Gossypium hirsutum HOM05D005879 ORTHO05D007432 5.9e-85 318.5 357 49.3
Prupe.6G188100 Prunus persica HOM05D005879 ORTHO05D007432 4.2e-83 312.4 350 48.3
EL10Ac5g10569 Beta vulgaris HOM05D005879 ORTHO05D007432 7.2e-83 311.6 348 48.9
MD05G1043000 Malus domestica HOM05D005879 ORTHO05D007432 9.4e-83 311.2 352 48.0
arahy.Tifrunner.gnm1.ann1.Y76I0L Arachis hypogaea HOM05D005879 ORTHO05D007432 2.1e-82 310.1 347 48.4
Hma1.2p1_0308F.1_g120270 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 3.6e-82 309.3 342 50.0
TWI77G0137 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 3.6e-82 309.3 356 48.3
Cfa017077 Carpinus fangiana HOM05D005879 ORTHO05D007432 4.7e-82 308.9 338 47.0
Haze_24910 Corylus avellana HOM05D005879 ORTHO05D007432 1.0e-81 307.8 331 47.4
Haze_24914 Corylus avellana HOM05D005879 ORTHO05D007432 1.0e-81 307.8 331 47.4
Ah.11g050680 Amaranthus hybridus HOM05D005879 ORTHO05D007432 1.8e-81 307.0 339 48.7
FAN26G1261 Fragaria x ananassa HOM05D005879 ORTHO05D007432 1.8e-81 307.0 326 48.5
Lj4g0026645 Lotus japonicus HOM05D005879 ORTHO05D007432 2.3e-81 306.6 334 49.4
Sopen05g031350 Solanum pennellii HOM05D005879 ORTHO05D007432 2.3e-81 306.6 331 49.2
CARHR246770 Cardamine hirsuta HOM05D005879 ORTHO05D007432 3.0e-81 306.2 347 48.4
Solyc05g052840.1 Solanum lycopersicum HOM05D005879 ORTHO05D007432 3.0e-81 306.2 331 49.2
Sc05g0001510 Simmondsia chinensis HOM05D005879 ORTHO05D007432 3.9e-81 305.8 354 47.7
RcHm_v2.0_Chr2g0113151 Rosa chinensis HOM05D005879 ORTHO05D007432 5.1e-81 305.4 347 47.8
CiPaw.03G142700 Carya illinoinensis HOM05D005879 ORTHO05D007432 8.8e-81 304.7 330 48.8
QL06p049237 Quercus lobata HOM05D005879 ORTHO05D007432 8.8e-81 304.7 360 46.9
AUR62008049 Chenopodium quinoa HOM05D005879 ORTHO05D007432 1.1e-80 304.3 342 49.1
CsaV3_4G004590 Cucumis sativus L. HOM05D005879 ORTHO05D007432 1.1e-80 304.3 334 49.1
CsaV3_UNG120970 Cucumis sativus L. HOM05D005879 ORTHO05D007432 1.1e-80 304.3 334 49.1
CsaV3_UNG160200 Cucumis sativus L. HOM05D005879 ORTHO05D007432 1.1e-80 304.3 334 49.1
CsaV3_UNG223580 Cucumis sativus L. HOM05D005879 ORTHO05D007432 1.1e-80 304.3 334 49.1
HanXRQChr17g0554861 Helianthus annuus HOM05D005879 ORTHO05D007432 1.1e-80 304.3 348 48.0
ClCG07G017360 Citrullus lanatus HOM05D005879 ORTHO05D007432 1.5e-80 303.9 354 47.7
PGSC0003DMG400027189 Solanum tuberosum HOM05D005879 ORTHO05D007432 1.5e-80 303.9 352 47.2
Gohir.D11G220800 Gossypium hirsutum HOM05D005879 ORTHO05D007432 2.0e-80 303.5 330 50.0
AL7G12180 Arabidopsis lyrata HOM05D005879 ORTHO05D007432 2.6e-80 303.1 328 50.0
ATR0584G053 Amborella trichopoda HOM05D005879 ORTHO05D007432 3.3e-80 302.8 351 47.3
Eucgr.B03900 Eucalyptus grandis HOM05D005879 ORTHO05D007432 3.3e-80 302.8 351 47.9
AUR62028624 Chenopodium quinoa HOM05D005879 ORTHO05D007432 4.4e-80 302.4 342 48.5
FvH4_1g20700 Fragaria vesca HOM05D005879 ORTHO05D007432 5.7e-80 302.0 348 45.4
arahy.Tifrunner.gnm1.ann1.F9QSZL Arachis hypogaea HOM05D005879 ORTHO05D007432 7.4e-80 301.6 354 46.9
TPR.G6200 Trifolium pratense HOM05D005879 ORTHO05D007432 1.7e-79 300.4 381 43.8
Carub.0007s0187 Capsella rubella HOM05D005879 ORTHO05D007432 2.2e-79 300.1 333 49.5
Gorai.007G237000 Gossypium raimondii HOM05D005879 ORTHO05D007432 3.7e-79 299.3 351 48.1
HPP92_013925 Vanilla planifolia HOM05D005879 ORTHO05D007432 4.8e-79 298.9 338 47.9
Aa31LG6G15340 Aethionema arabicum HOM05D005879 ORTHO05D007432 8.2e-79 298.1 333 47.7
Thhalv10025595m.g Eutrema salsugineum HOM05D005879 ORTHO05D007432 2.4e-78 296.6 353 47.6
Cpa.g.sc615.1 Carica papaya HOM05D005879 ORTHO05D007432 3.1e-78 296.2 355 45.9
Ca_17743_v3 Cicer arietinum L. HOM05D005879 ORTHO05D007432 3.1e-78 296.2 360 45.0
MELO3C017607.2 Cucumis melo HOM05D005879 ORTHO05D007432 5.3e-78 295.4 354 46.9
BraA03t15633Z Brassica rapa HOM05D005879 ORTHO05D007432 7.0e-78 295.0 330 50.0
Manes.12G134100 Manihot esculenta HOM05D005879 ORTHO05D007432 7.0e-78 295.0 354 45.2
A03p65800 Brassica napus HOM05D005879 ORTHO05D007432 1.6e-77 293.9 330 49.7
TWI81G0999 Tripterygium wilfordii HOM05D005879 ORTHO05D007432 1.6e-77 293.9 334 49.1
Sed0022481 Sechium edule HOM05D005879 ORTHO05D007432 2.0e-77 293.5 346 46.0
AT4G39920 Arabidopsis thaliana HOM05D005879 ORTHO05D007432 2.6e-77 293.1 348 47.1
Glyma.08G134800 Glycine max HOM05D005879 ORTHO05D007432 4.5e-77 292.4 344 45.6
VMungo0251G0721 Vigna mungo HOM05D005879 ORTHO05D007432 4.5e-77 292.4 338 45.6
Potri.005G074700 Populus trichocarpa HOM05D005879 ORTHO05D007432 7.7e-77 291.6 339 46.0
BolC7t46692H Brassica oleracea HOM05D005879 ORTHO05D007432 1.0e-76 291.2 328 48.2
Ciclev10020973m.g Citrus clementina HOM05D005879 ORTHO05D007432 1.0e-76 291.2 337 47.5
Medtr8g090180 Medicago truncatula HOM05D005879 ORTHO05D007432 1.0e-76 291.2 355 43.4
Cc07_g15080 Coffea canephora HOM05D005879 ORTHO05D007432 2.2e-76 290.0 349 47.0
Nitab4.5_0009581g0010 Nicotiana tabacum HOM05D005879 ORTHO05D007432 2.9e-76 289.7 365 45.2
CAN.G151.26 Capsicum annuum HOM05D005879 ORTHO05D007432 3.8e-76 289.3 334 45.8
Atru.chr7.1487 Acer truncatum HOM05D005879 ORTHO05D007432 5.0e-76 288.9 343 46.9
Peaxi162Scf00054g00186 Petunia axillaris HOM05D005879 ORTHO05D007432 5.0e-76 288.9 356 46.1
C07p62780 Brassica napus HOM05D005879 ORTHO05D007432 6.5e-76 288.5 332 48.5
Lsat_1_v5_gn_8_137181 Lactuca sativa HOM05D005879 ORTHO05D007432 8.5e-76 288.1 328 48.8
Migut.L00135 Erythranthe guttata HOM05D005879 ORTHO05D007432 1.5e-75 287.3 337 48.7
COL.COLO4_27255 Corchorus olitorius HOM05D005879 ORTHO05D007432 2.5e-75 286.6 301 51.8
ECA233G0618 Erigeron canadensis HOM05D005879 ORTHO05D007432 9.4e-75 284.6 330 47.3
Sp7g35960 Schrenkiella parvula HOM05D005879 ORTHO05D007432 3.6e-74 282.7 343 46.4
Duzib147G1529 Durio zibethinus HOM05D005879 ORTHO05D007432 4.7e-74 282.3 240 57.9
Oeu032409.1 Olea europaea HOM05D005879 ORTHO05D007432 8.0e-74 281.6 338 48.8
MSTRG.3773 Avicennia marina HOM05D005879 ORTHO05D007432 1.4e-73 280.8 342 47.4
Sabra05G0061500 Salix brachista HOM05D005879 ORTHO05D007432 1.4e-73 280.8 337 45.1
Phvul.002G256800 Phaseolus vulgaris HOM05D005879 ORTHO05D007432 2.3e-73 280.0 338 45.3
DCAR_003483 Daucus carota HOM05D005879 ORTHO05D007432 8.8e-73 278.1 332 46.4
SGA_v2.0_scaffold334G49051 Striga asiatica HOM05D005879 ORTHO05D007432 1.3e-71 274.2 345 46.1
SGA_v2.0_scaffold115G32189 Striga asiatica HOM05D005879 ORTHO05D007432 1.7e-71 273.9 344 46.2
FAN19G0980 Fragaria x ananassa HOM05D005879 ORTHO05D007432 2.0e-69 266.9 319 43.9
Rhsim01G0133800 Rhododendron simsii HOM05D005879 ORTHO05D007432 2.7e-69 266.5 369 42.3
RhsimUnG0233600 Rhododendron simsii HOM05D005879 ORTHO05D007432 2.7e-69 266.5 369 42.3
vmacro12962 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 3.5e-69 266.2 382 41.1
Thecc.01G100600 Theobroma cacao HOM05D005879 ORTHO05D007432 7.7e-69 265.0 248 52.8
unitig_32.g10701 Utricularia gibba HOM05D005879 ORTHO05D007432 3.8e-68 262.7 337 45.1
Glyma.05G177800 Glycine max HOM05D005879 ORTHO05D007432 1.9e-67 260.4 341 43.7
Zm00001eb243870 Zea mays HOM05D005879 ORTHO05D007432 2.0e-64 250.4 342 45.0
Hma1.2p1_0308F.1_g120280 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 8.3e-63 245.0 185 59.5
SalBow7G4497 Salvia bowleyana HOM05D005879 ORTHO05D007432 1.4e-62 244.2 324 43.2
PGR102G2441 Punica granatum HOM05D005879 ORTHO05D007432 2.4e-62 243.4 352 40.6
Os02g0557000 Oryza sativa ssp. japonica HOM05D005879 ORTHO05D007432 4.1e-62 242.7 340 42.1
vmacro17311 Vaccinium macrocarpon HOM05D005879 ORTHO05D007432 1.1e-59 234.6 322 40.1
VMungo0540G1211 Vigna mungo HOM05D005879 ORTHO05D007432 8.8e-57 224.9 226 46.9
Atru.chr11.1549 Acer truncatum HOM05D005879 ORTHO05D007432 1.2e-56 224.6 187 57.8
arahy.Tifrunner.gnm1.ann1.DH96WI Arachis hypogaea HOM05D005879 ORTHO05D007432 2.2e-55 220.3 283 44.5
SEGI_25682 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 2.0e-53 213.8 195 51.8
SMO143G0283 Selaginella moellendorffii HOM05D005879 ORTHO05D007432 8.6e-52 208.4 326 37.1
AagrBONN_evm.TU.Sc2ySwM_117.1918 Anthoceros agrestis HOM05D005879 ORTHO05D007432 1.1e-51 208.0 335 35.5
Mapoly0002s0046 Marchantia polymorpha HOM05D005879 ORTHO05D007432 4.7e-50 202.6 345 37.7
Pp3c13_2250 Physcomitrium patens HOM05D005879 ORTHO05D007432 8.9e-49 198.4 341 36.7
FAN23G0004 Fragaria x ananassa HOM05D005879 ORTHO05D007432 1.7e-47 194.1 128 68.0
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 2.4e-46 190.3 363 32.2
Potri.007G093800 Populus trichocarpa HOM05D005879 ORTHO05D007432 4.6e-45 186.0 327 37.3
Psat7g055120 Pisum sativum HOM05D005879 ORTHO05D007432 2.3e-44 183.7 322 36.3
MD01G1031400 Malus domestica HOM05D005879 ORTHO05D007432 5.0e-44 182.6 128 63.3
Atru.chr7.1491 Acer truncatum HOM05D005879 ORTHO05D007432 5.0e-36 156.0 241 38.6
C03p78540 Brassica napus HOM05D005879 ORTHO05D007432 2.3e-33 147.1 308 35.1
MCO11G662 Micromonas commoda HOM05D005879 ORTHO05D007432 1.5e-32 144.4 347 29.4
BolC3t20106H Brassica oleracea HOM05D005879 ORTHO05D007432 2.0e-32 144.1 288 36.8
HPP92_014012 Vanilla planifolia HOM05D005879 ORTHO05D007432 2.0e-32 144.1 238 40.3
Actinidia28237 Actinidia chinensis HOM05D005879 ORTHO05D007432 5.8e-32 142.5 112 59.8
BcaB03g12293 Brassica carinata HOM05D005879 ORTHO05D007432 3.9e-28 129.8 201 41.3
Cre03.g200150 Chlamydomonas reinhardtii HOM05D005879 ORTHO05D007432 3.9e-28 129.8 142 45.1
PRCOL_00003435 Prasinoderma coloniale HOM05D005879 ORTHO05D007432 8.6e-28 128.6 239 32.2
MBI15_g14577_MAGBIO Magnolia biondii HOM05D005879 ORTHO05D007432 2.8e-26 123.6 78 66.7
Migut.L00117 Erythranthe guttata HOM05D005879 ORTHO05D007432 4.0e-25 119.8 86 64.0
Hma1.2p1_0297F.1_g117050 Hydrangea macrophylla HOM05D005879 ORTHO05D007432 2.7e-21 107.1 104 56.7
GSVIVG01004856001 Vitis vinifera HOM05D005879 ORTHO05D007432 7.8e-21 105.5 139 43.2
BraA08t34278Z Brassica rapa HOM05D005879 ORTHO05D007432 2.8e-18 97.1 77 64.9
SEGI_41531 Sequoiadendron giganteum HOM05D005879 ORTHO05D007432 1.3e-15 88.2 144 39.6
A08p23210 Brassica napus HOM05D005879 ORTHO05D007432 3.5e-13 80.1 70 60.0
BcaNung02300 Brassica carinata HOM05D005879 ORTHO05D007432 7.8e-13 79.0 148 39.9
PRCOL_00004923 Prasinoderma coloniale HOM05D005879 ORTHO05D034414 7.8e-13 79.0 151 28.5
Pp3c4_21480 Physcomitrium patens HOM05D005879 ORTHO05D007432 9.9e-08 62.0 58 51.7
Cfa025806 Carpinus fangiana HOM05D005879 ORTHO05D123935 1.1e-06 58.5 114 29.8
Medtr1g108500 Medicago truncatula HOM05D011368 ORTHO05D000135 4.2e-06 56.6 81 34.6


User provided reference genes

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