Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0601 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 8.0e-95 350.5 190 100.0
CDE12G0226 Ceratophyllum demersum HOM05D005654 ORTHO05D006438 1.0e-89 333.6 190 95.3
CiPaw.08G137200 Carya illinoinensis HOM05D005654 ORTHO05D006438 2.6e-45 186.0 190 56.8
MBI01_g45163_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 2.6e-45 186.0 198 54.5
Nn1g05784 Nelumbo nucifera HOM05D005654 ORTHO05D006438 1.7e-44 183.3 187 55.6
TAR381G0206 Trochodendron aralioides HOM05D005654 ORTHO05D006438 3.2e-43 179.1 185 55.1
Haze_03832 Corylus avellana HOM05D005654 ORTHO05D006438 2.1e-42 176.4 185 55.1
PSO170G2173 Papaver somniferum HOM05D005654 ORTHO05D006438 7.9e-42 174.5 187 54.0
QL06p034798 Quercus lobata HOM05D005654 ORTHO05D006438 1.0e-41 174.1 184 55.4
QL10p007390 Quercus lobata HOM05D005654 ORTHO05D006438 1.0e-41 174.1 184 55.4
Nitab4.5_0007445g0010 Nicotiana tabacum HOM05D005654 ORTHO05D006438 1.3e-41 173.7 189 52.4
Migut.H02503 Erythranthe guttata HOM05D005654 ORTHO05D006438 2.3e-41 172.9 188 52.1
GSVIVG01018856001 Vitis vinifera HOM05D005654 ORTHO05D006438 3.9e-41 172.2 185 53.5
Sed0005955 Sechium edule HOM05D005654 ORTHO05D006438 5.1e-41 171.8 187 54.0
Lj3g0016616 Lotus japonicus HOM05D005654 ORTHO05D006438 1.9e-40 169.9 187 52.4
PSO528G0264 Papaver somniferum HOM05D005654 ORTHO05D006438 2.5e-40 169.5 192 52.6
QL08p063081 Quercus lobata HOM05D005654 ORTHO05D006438 3.3e-40 169.1 190 53.2
PSO339G4156 Papaver somniferum HOM05D005654 ORTHO05D006438 5.6e-40 168.3 186 53.2
PGR119G1083 Punica granatum HOM05D005654 ORTHO05D006438 5.6e-40 168.3 189 52.4
Hma1.2p1_1114F.1_g258780 Hydrangea macrophylla HOM05D005654 ORTHO05D006438 7.4e-40 167.9 193 49.2
CSS0048601 Camellia sinensis var. sinensis HOM05D005654 ORTHO05D006438 9.6e-40 167.5 190 51.1
Peaxi162Scf00329g00119 Petunia axillaris HOM05D005654 ORTHO05D006438 9.6e-40 167.5 185 51.4
RcHm_v2.0_Chr6g0277811 Rosa chinensis HOM05D005654 ORTHO05D006438 9.6e-40 167.5 190 57.9
Dinv33576 Davidia involucrata HOM05D005654 ORTHO05D006438 1.3e-39 167.2 185 51.4
Manes.02G099200 Manihot esculenta HOM05D005654 ORTHO05D006438 1.3e-39 167.2 196 50.5
Lalb_Chr06g0172541 Lupinus albus HOM05D005654 ORTHO05D006438 1.6e-39 166.8 191 50.8
FAN07G1349 Fragaria x ananassa HOM05D005654 ORTHO05D006438 2.1e-39 166.4 184 54.3
Nitab4.5_0002707g0030 Nicotiana tabacum HOM05D005654 ORTHO05D006438 2.1e-39 166.4 190 52.1
Actinidia26105 Actinidia chinensis HOM05D005654 ORTHO05D006438 3.7e-39 165.6 183 51.9
CANSAT01G3286 Cannabis sativa HOM05D005654 ORTHO05D006438 3.7e-39 165.6 191 54.5
Aqoxy6G01210 Aquilegia oxysepala HOM05D005654 ORTHO05D006438 4.8e-39 165.2 192 50.0
MELO3C005244.2 Cucumis melo HOM05D005654 ORTHO05D006438 8.1e-39 164.5 196 51.0
FvH4_2g15150 Fragaria vesca HOM05D005654 ORTHO05D006438 8.1e-39 164.5 186 54.3
MD10G1009400 Malus domestica HOM05D005654 ORTHO05D006438 1.1e-38 164.1 189 58.2
SalBow8G3171 Salvia bowleyana HOM05D005654 ORTHO05D006438 1.1e-38 164.1 192 51.6
THA.LOC104819191 Tarenaya hassleriana HOM05D005654 ORTHO05D006438 1.1e-38 164.1 194 51.5
FAN17G0825 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.4e-38 163.7 186 53.8
Phvul.010G058900 Phaseolus vulgaris HOM05D005654 ORTHO05D006438 1.4e-38 163.7 184 52.2
Sopen04g003980 Solanum pennellii HOM05D005654 ORTHO05D006438 1.8e-38 163.3 185 51.4
Gohir.A11G179400 Gossypium hirsutum HOM05D005654 ORTHO05D006438 2.4e-38 162.9 192 49.5
Gohir.D11G187100 Gossypium hirsutum HOM05D005654 ORTHO05D006438 2.4e-38 162.9 194 48.5
Thecc.01G026300 Theobroma cacao HOM05D005654 ORTHO05D006438 2.4e-38 162.9 192 49.5
Glyma.13G002400 Glycine max HOM05D005654 ORTHO05D006438 3.1e-38 162.5 187 50.8
Gorai.007G199000 Gossypium raimondii HOM05D005654 ORTHO05D006438 3.1e-38 162.5 192 49.5
FAN22G0080 Fragaria x ananassa HOM05D005654 ORTHO05D006438 5.3e-38 161.8 186 53.2
PGSC0003DMG400025306 Solanum tuberosum HOM05D005654 ORTHO05D006438 5.3e-38 161.8 185 49.7
Lj5g0021075 Lotus japonicus HOM05D005654 ORTHO05D006438 6.9e-38 161.4 183 50.3
Prupe.8G013400 Prunus persica HOM05D005654 ORTHO05D006438 9.0e-38 161.0 189 51.9
Solyc04g008800.3 Solanum lycopersicum HOM05D005654 ORTHO05D006438 9.0e-38 161.0 185 50.8
COL.COLO4_21992 Corchorus olitorius HOM05D005654 ORTHO05D006438 1.2e-37 160.6 188 50.5
CsaV3_5G027780 Cucumis sativus L. HOM05D005654 ORTHO05D006438 1.2e-37 160.6 196 50.0
Lj2A460T79 Lonicera japonica HOM05D005654 ORTHO05D006438 1.2e-37 160.6 193 50.3
CAN.G419.13 Capsicum annuum HOM05D005654 ORTHO05D006438 1.5e-37 160.2 188 47.9
VMungo0331G0515 Vigna mungo HOM05D005654 ORTHO05D006438 1.5e-37 160.2 184 53.3
Sc18g0007030 Simmondsia chinensis HOM05D005654 ORTHO05D006438 2.0e-37 159.8 199 51.3
TWI60G0108 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 2.0e-37 159.8 196 48.5
MSTRG.23266 Avicennia marina HOM05D005654 ORTHO05D006438 2.6e-37 159.5 192 47.4
Cc07_g10180 Coffea canephora HOM05D005654 ORTHO05D006438 3.4e-37 159.1 191 48.7
Eucgr.H02778 Eucalyptus grandis HOM05D005654 ORTHO05D006438 3.4e-37 159.1 186 52.2
ATR0605G129 Amborella trichopoda HOM05D005654 ORTHO05D006438 5.8e-37 158.3 130 73.8
ClCG09G019610 Citrullus lanatus HOM05D005654 ORTHO05D006438 5.8e-37 158.3 192 51.0
Glyma.20G066700 Glycine max HOM05D005654 ORTHO05D006438 7.6e-37 157.9 187 50.3
Ca_14022_v3 Cicer arietinum L. HOM05D005654 ORTHO05D006438 1.3e-36 157.1 185 54.6
FvH4_4g16440 Fragaria vesca HOM05D005654 ORTHO05D006438 1.3e-36 157.1 184 52.7
FAN12G4326 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.3e-36 157.1 184 52.7
Lsat_1_v5_gn_9_115780 Lactuca sativa HOM05D005654 ORTHO05D006438 1.7e-36 156.8 192 49.0
ECA248G0981 Erigeron canadensis HOM05D005654 ORTHO05D006438 2.2e-36 156.4 188 50.0
Sabra07G0015400 Salix brachista HOM05D005654 ORTHO05D006438 6.5e-36 154.8 189 51.3
AT3G51010 Arabidopsis thaliana HOM05D005654 ORTHO05D006438 8.4e-36 154.5 196 50.5
Glyma.16G220800 Glycine max HOM05D005654 ORTHO05D006438 1.1e-35 154.1 184 51.1
Manes.01G140500 Manihot esculenta HOM05D005654 ORTHO05D006438 1.1e-35 154.1 196 49.0
Medtr8g077440 Medicago truncatula HOM05D005654 ORTHO05D006438 1.1e-35 154.1 185 53.0
AL5G31430 Arabidopsis lyrata HOM05D005654 ORTHO05D006438 1.9e-35 153.3 198 49.0
MD05G1010700 Malus domestica HOM05D005654 ORTHO05D006438 3.2e-35 152.5 185 54.6
HPP92_013005 Vanilla planifolia HOM05D005654 ORTHO05D006438 4.2e-35 152.1 182 50.5
BcaNung00403 Brassica carinata HOM05D005654 ORTHO05D006438 5.5e-35 151.8 193 50.3
BraA03t13914Z Brassica rapa HOM05D000363 ORTHO05D005000 1.2e-34 150.6 191 50.3
arahy.Tifrunner.gnm1.ann1.IV76VY Arachis hypogaea HOM05D005654 ORTHO05D006438 2.1e-34 149.8 202 48.0
A03p48070 Brassica napus HOM05D000363 ORTHO05D005000 2.1e-34 149.8 191 49.7
TPR.G24134 Trifolium pratense HOM05D005654 ORTHO05D006438 2.1e-34 149.8 183 51.9
Carub.0005s1741 Capsella rubella HOM05D005654 ORTHO05D006438 2.7e-34 149.4 196 48.0
Dinv33575 Davidia involucrata HOM05D005654 ORTHO05D006438 2.7e-34 149.4 120 65.0
C07p46090 Brassica napus HOM05D000363 ORTHO05D005000 3.5e-34 149.1 191 49.7
BolC7t45125H Brassica oleracea HOM05D000363 ORTHO05D005000 3.5e-34 149.1 191 49.7
Sp5g11200 Schrenkiella parvula HOM05D005654 ORTHO05D006438 4.6e-34 148.7 197 49.7
Thhalv10010748m.g Eutrema salsugineum HOM05D005654 ORTHO05D006438 1.0e-33 147.5 196 48.5
BcaC07g39579 Brassica carinata HOM05D005654 ORTHO05D006438 1.3e-33 147.1 191 51.3
C08p26310 Brassica napus HOM05D005654 ORTHO05D006438 1.3e-33 147.1 191 51.3
A09p44110 Brassica napus HOM05D000363 ORTHO05D006438 1.8e-33 146.7 191 50.3
BraA09t39870Z Brassica rapa HOM05D005654 ORTHO05D006438 1.8e-33 146.7 191 50.8
HanXRQChr10g0278901 Helianthus annuus HOM05D005654 ORTHO05D006438 1.8e-33 146.7 183 48.6
BolC8t50249H Brassica oleracea HOM05D005654 ORTHO05D006438 2.3e-33 146.4 191 51.3
BcaB01g00554 Brassica carinata HOM05D005654 ORTHO05D006438 3.9e-33 145.6 194 51.0
SGA_v2.0_scaffold9G04932 Striga asiatica HOM05D005654 ORTHO05D006438 3.9e-33 145.6 126 67.5
BcaC06g33063 Brassica carinata HOM05D005654 ORTHO05D006438 5.1e-33 145.2 191 49.2
Oeu035320.1 Olea europaea HOM05D005654 ORTHO05D006438 1.5e-32 143.7 130 60.8
AUR62027117 Chenopodium quinoa HOM05D005654 ORTHO05D006438 1.6e-31 140.2 204 50.0
Oeu021744.2 Olea europaea HOM05D005654 ORTHO05D006438 1.6e-31 140.2 240 40.4
Aa31LG4G19130 Aethionema arabicum HOM05D005654 ORTHO05D006438 3.1e-30 136.0 194 46.4
Zm00001eb265250 Zea mays HOM05D005654 ORTHO05D006438 3.1e-30 136.0 121 62.0
Lj4A211T64 Lonicera japonica HOM05D005654 ORTHO05D006438 1.5e-29 133.7 202 42.6
AUR62012893 Chenopodium quinoa HOM05D005654 ORTHO05D006438 2.6e-29 132.9 204 49.0
Hund00373 Selenicereus undatus HOM05D005654 ORTHO05D006438 2.6e-29 132.9 197 42.6
arahy.Tifrunner.gnm1.ann1.I9PPQ0 Arachis hypogaea HOM05D005654 ORTHO05D006438 1.3e-28 130.6 187 46.5
Os05g0126200 Oryza sativa ssp. japonica HOM05D005654 ORTHO05D006438 8.4e-28 127.9 121 65.3
Nn5g29728 Nelumbo nucifera HOM05D005654 ORTHO05D006438 3.5e-26 122.5 136 49.3
Ciclev10003765m.g Citrus clementina HOM05D005654 ORTHO05D006438 1.1e-24 117.5 136 48.5
DCAR_025978 Daucus carota HOM05D005654 ORTHO05D006438 1.5e-24 117.1 191 49.2
SGA_v2.0_scaffold280G46859 Striga asiatica HOM05D005654 ORTHO05D006438 9.7e-24 114.4 132 48.5
EL10Ac9g22080 Beta vulgaris HOM05D005654 ORTHO05D006438 1.3e-23 114.0 256 35.5
Ah.08g209860 Amaranthus hybridus HOM05D005654 ORTHO05D006438 4.8e-23 112.1 143 46.2
Cfa006918 Carpinus fangiana HOM05D005654 ORTHO05D006438 5.3e-22 108.6 95 62.1
FAN20G0529 Fragaria x ananassa HOM05D005654 ORTHO05D006438 5.9e-21 105.1 131 54.2
Cpa.g.sc217.22 Carica papaya HOM05D005654 ORTHO05D006438 1.0e-20 104.4 165 40.6
Sed0001903 Sechium edule HOM05D005654 ORTHO05D006438 2.2e-20 103.2 94 59.6
Potri.007G018300 Populus trichocarpa HOM05D005654 ORTHO05D006438 2.9e-20 102.8 146 43.2
Psat0s439g0080 Pisum sativum HOM05D005654 ORTHO05D006438 8.5e-20 101.3 131 44.3
FAN24G1434 Fragaria x ananassa HOM05D005654 ORTHO05D006438 1.1e-19 100.9 168 42.3
TWI09G1445 Tripterygium wilfordii HOM05D005654 ORTHO05D006438 2.5e-19 99.8 89 61.8
Psat2g190960 Pisum sativum HOM05D005654 ORTHO05D006438 4.2e-19 99.0 130 45.4
CARHR160580 Cardamine hirsuta HOM05D005654 ORTHO05D006438 9.4e-19 97.8 95 60.0
unitig_747.g21954 Utricularia gibba HOM05D005654 ORTHO05D006438 1.6e-18 97.1 117 50.4
Rhsim08G0123600 Rhododendron simsii HOM05D005654 ORTHO05D006438 1.0e-17 94.4 190 35.8
Zm00001eb414250 Zea mays HOM05D005654 ORTHO05D006438 1.0e-17 94.4 93 59.1
SEGI_21166 Sequoiadendron giganteum HOM05D005654 ORTHO05D006438 2.5e-16 89.7 118 46.6
Zm00001eb355020 Zea mays HOM05D005654 ORTHO05D006438 3.3e-16 89.4 126 45.2
MBI01_g11791_MAGBIO Magnolia biondii HOM05D005654 ORTHO05D006438 4.2e-11 72.4 145 37.9
Zm00001eb035810 Zea mays HOM05D005654 ORTHO05D006438 1.2e-10 70.9 77 54.5
Lalb_Chr02g0154671 Lupinus albus HOM05D005654 ORTHO05D006438 7.9e-10 68.2 88 43.2
Zm00001eb078300 Zea mays HOM05D000349 ORTHO05D010734 1.4e-09 67.4 83 50.6
Zm00001eb309330 Zea mays HOM05D000349 ORTHO05D006438 1.4e-09 67.4 83 50.6
SHI03481 Sapria himalayana HOM05D005654 ORTHO05D006438 3.9e-09 65.9 105 38.1
SHI05467 Sapria himalayana HOM05D005654 ORTHO05D006438 1.3e-07 60.8 64 56.2
Zm00001eb093520 Zea mays HOM05D005654 ORTHO05D006438 3.7e-07 59.3 52 59.6
FAN15G1271 Fragaria x ananassa HOM05D005654 ORTHO05D006438 4.8e-07 58.9 61 59.0
Mapoly0001s0539 Marchantia polymorpha HOM05D024399 ORTHO05D023494 2.4e-06 56.6 111 37.8


User provided reference genes

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