Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0573 Ceratophyllum demersum HOM05D004752 ORTHO05D005523 1.3e-45 186.0 96 100.0
CDE07G1886 Ceratophyllum demersum HOM05D004752 ORTHO05D005523 2.8e-43 178.3 96 96.9
Lj6g0009552 Lotus japonicus HOM05D004752 ORTHO05D005523 1.9e-28 129.0 97 68.0
Potri.019G081700 Populus trichocarpa HOM05D004752 ORTHO05D005523 7.3e-28 127.1 97 67.0
TAR628G0740 Trochodendron aralioides HOM05D004752 ORTHO05D005523 7.3e-28 127.1 97 70.1
TAR381G0821 Trochodendron aralioides HOM05D004752 ORTHO05D005523 6.2e-27 124.0 97 68.0
Manes.18G103200 Manihot esculenta HOM05D004752 ORTHO05D005523 1.1e-26 123.2 99 62.6
MELO3C008132.2 Cucumis melo HOM05D004752 ORTHO05D005523 1.8e-26 122.5 99 64.6
Glyma.10G117300 Glycine max HOM05D004752 ORTHO05D005523 1.8e-26 122.5 97 64.9
CsaV3_2G033590 Cucumis sativus L. HOM05D004752 ORTHO05D005523 3.1e-26 121.7 99 63.6
Potri.013G110600 Populus trichocarpa HOM05D004752 ORTHO05D005523 4.0e-26 121.3 99 63.6
BcaC03g15326 Brassica carinata HOM05D004752 ORTHO05D005523 5.2e-26 120.9 97 62.9
A02p17630 Brassica napus HOM05D004752 ORTHO05D005523 5.2e-26 120.9 97 62.9
C02p29310 Brassica napus HOM05D004752 ORTHO05D005523 5.2e-26 120.9 97 62.9
BolC2t08982H Brassica oleracea HOM05D004752 ORTHO05D005523 5.2e-26 120.9 97 62.9
BraA02t06809Z Brassica rapa HOM05D004752 ORTHO05D005523 5.2e-26 120.9 97 62.9
Thhalv10019369m.g Eutrema salsugineum HOM05D004752 ORTHO05D005523 5.2e-26 120.9 97 63.9
Sp5g27090 Schrenkiella parvula HOM05D004752 ORTHO05D005523 5.2e-26 120.9 97 62.9
Aa31LG4G8590 Aethionema arabicum HOM05D004752 ORTHO05D005523 6.8e-26 120.6 97 62.9
BcaB03g14924 Brassica carinata HOM05D004752 ORTHO05D005523 6.8e-26 120.6 97 62.9
BcaB05g24700 Brassica carinata HOM05D004752 ORTHO05D005523 6.8e-26 120.6 97 62.9
BcaC08g46649 Brassica carinata HOM05D004752 ORTHO05D005523 6.8e-26 120.6 97 62.9
Glyma.20G068500 Glycine max HOM05D004752 ORTHO05D005523 6.8e-26 120.6 97 63.9
Medtr1g048960 Medicago truncatula HOM05D004752 ORTHO05D005523 6.8e-26 120.6 97 63.9
BcaC08g46647 Brassica carinata HOM05D004752 ORTHO05D005523 8.9e-26 120.2 97 61.9
BcaC08g46651 Brassica carinata HOM05D004752 ORTHO05D005523 8.9e-26 120.2 97 61.9
BcaC08g46652 Brassica carinata HOM05D004752 ORTHO05D005523 8.9e-26 120.2 97 61.9
BcaC08g45743 Brassica carinata HOM05D004752 ORTHO05D005523 1.2e-25 119.8 97 62.9
CARHR064830 Cardamine hirsuta HOM05D004752 ORTHO05D005523 1.2e-25 119.8 97 62.9
COL.COLO4_34528 Corchorus olitorius HOM05D004752 ORTHO05D005523 1.2e-25 119.8 100 62.0
Hund27095 Selenicereus undatus HOM05D004752 ORTHO05D005523 1.2e-25 119.8 98 64.3
C06p46120 Brassica napus HOM05D004752 ORTHO05D005523 1.5e-25 119.4 97 61.9
BolC6t39665H Brassica oleracea HOM05D004752 ORTHO05D005523 1.5e-25 119.4 97 61.9
BraA07t31385Z Brassica rapa HOM05D004752 ORTHO05D005523 1.5e-25 119.4 97 61.9
Nn5g27610 Nelumbo nucifera HOM05D004752 ORTHO05D005523 1.5e-25 119.4 99 64.6
QL12p035384 Quercus lobata HOM05D004752 ORTHO05D005523 1.5e-25 119.4 95 64.2
BolC6t38628H Brassica oleracea HOM05D004752 ORTHO05D005523 2.0e-25 119.0 97 61.9
Dinv41721 Davidia involucrata HOM05D004752 ORTHO05D005523 2.0e-25 119.0 100 64.0
PGR042G3757 Punica granatum HOM05D004752 ORTHO05D005523 2.0e-25 119.0 100 64.0
Sc23g0001310 Simmondsia chinensis HOM05D004752 ORTHO05D005523 2.0e-25 119.0 98 65.3
Atru.chr13.2410 Acer truncatum HOM05D004752 ORTHO05D005523 2.6e-25 118.6 97 63.9
Aa31LG7G6540 Aethionema arabicum HOM05D003880 ORTHO05D004959 2.6e-25 118.6 97 60.8
Lalb_Chr03g0036521 Lupinus albus HOM05D004752 ORTHO05D005523 2.6e-25 118.6 97 66.0
PGR102G0675 Punica granatum HOM05D004752 ORTHO05D005523 2.6e-25 118.6 101 61.4
TPR.G20783 Trifolium pratense HOM05D004752 ORTHO05D005523 2.6e-25 118.6 97 62.9
C06p35220 Brassica napus HOM05D004752 ORTHO05D005523 3.4e-25 118.2 97 61.9
Carub.0002s1880 Capsella rubella HOM05D004752 ORTHO05D005523 3.4e-25 118.2 97 60.8
Lalb_Chr19g0129031 Lupinus albus HOM05D004752 ORTHO05D005523 3.4e-25 118.2 97 64.9
Sed0006132 Sechium edule HOM05D004752 ORTHO05D005523 3.4e-25 118.2 99 62.6
A07p38200 Brassica napus HOM05D004752 ORTHO05D005523 4.4e-25 117.9 97 61.9
THA.LOC104809736 Tarenaya hassleriana HOM05D004752 ORTHO05D005523 4.4e-25 117.9 97 63.9
CSS0011118 Camellia sinensis var. sinensis HOM05D004752 ORTHO05D005523 5.8e-25 117.5 100 65.0
CSS0018537 Camellia sinensis var. sinensis HOM05D004752 ORTHO05D005523 5.8e-25 117.5 100 65.0
Duzib177G0553 Durio zibethinus HOM05D004752 ORTHO05D005523 5.8e-25 117.5 100 63.0
Phvul.007G240400 Phaseolus vulgaris HOM05D004752 ORTHO05D005523 5.8e-25 117.5 97 64.9
Thecc.08G186100 Theobroma cacao HOM05D004752 ORTHO05D005523 5.8e-25 117.5 100 61.0
Aqoxy5G02666 Aquilegia oxysepala HOM05D004752 ORTHO05D005523 7.5e-25 117.1 103 65.0
Manes.02G194400 Manihot esculenta HOM05D004752 ORTHO05D005523 7.5e-25 117.1 97 62.9
ClCG09G009960 Citrullus lanatus HOM05D004752 ORTHO05D005523 9.8e-25 116.7 99 62.6
Lj5g0024701 Lotus japonicus HOM05D004752 ORTHO05D005523 1.3e-24 116.3 99 62.6
TWI14G1278 Tripterygium wilfordii HOM05D004752 ORTHO05D005523 1.3e-24 116.3 99 63.6
Duzib211G0386 Durio zibethinus HOM05D004752 ORTHO05D005523 1.7e-24 115.9 100 61.0
BcaB03g15640 Brassica carinata HOM05D004752 ORTHO05D005523 2.9e-24 115.2 98 62.2
CiPaw.06G024200 Carya illinoinensis HOM05D004752 ORTHO05D005523 2.9e-24 115.2 97 63.9
Gohir.A05G250100 Gossypium hirsutum HOM05D004752 ORTHO05D005523 2.9e-24 115.2 98 64.3
PSO170G1458 Papaver somniferum HOM05D004752 ORTHO05D005523 2.9e-24 115.2 99 61.6
PSO782G1292 Papaver somniferum HOM05D004752 ORTHO05D005523 2.9e-24 115.2 99 61.6
TWI59G0745 Tripterygium wilfordii HOM05D004752 ORTHO05D005523 3.7e-24 114.8 99 62.6
Prupe.1G506700 Prunus persica HOM05D004752 ORTHO05D005523 4.9e-24 114.4 97 61.9
CANSAT80G1056 Cannabis sativa HOM05D004752 ORTHO05D005523 6.4e-24 114.0 102 64.7
FAN04G0063 Fragaria x ananassa HOM05D004752 ORTHO05D005523 6.4e-24 114.0 97 60.8
Gohir.D05G251900 Gossypium hirsutum HOM05D004752 ORTHO05D005523 6.4e-24 114.0 98 63.3
Gorai.009G263300 Gossypium raimondii HOM05D004752 ORTHO05D005523 6.4e-24 114.0 98 63.3
Gorai.009G263400 Gossypium raimondii HOM05D004752 ORTHO05D005523 6.4e-24 114.0 98 63.3
RcHm_v2.0_Chr7g0240801 Rosa chinensis HOM05D004752 ORTHO05D005523 6.4e-24 114.0 97 60.8
Ca_21523_v3 Cicer arietinum L. HOM05D004752 ORTHO05D005523 8.3e-24 113.6 97 62.9
Lalb_Chr01g0010501 Lupinus albus HOM05D004752 ORTHO05D005523 8.3e-24 113.6 97 64.9
Cc00_g06570 Coffea canephora HOM05D004752 ORTHO05D005523 1.1e-23 113.2 100 60.0
A07p30460 Brassica napus HOM05D004752 ORTHO05D005523 1.4e-23 112.8 98 60.2
FvH4_5g38800 Fragaria vesca HOM05D004752 ORTHO05D005523 1.4e-23 112.8 97 59.8
FAN08G2110 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.4e-23 112.8 97 59.8
FAN13G0652 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.4e-23 112.8 97 59.8
FAN18G0635 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.4e-23 112.8 97 59.8
Gohir.A05G250200 Gossypium hirsutum HOM05D004752 ORTHO05D005523 1.4e-23 112.8 98 61.2
Gohir.D05G253600 Gossypium hirsutum HOM05D004752 ORTHO05D005523 1.9e-23 112.5 97 62.9
Gohir.D09G112701 Gossypium hirsutum HOM05D004752 ORTHO05D005523 2.4e-23 112.1 99 59.6
THA.LOC104816385 Tarenaya hassleriana HOM05D004752 ORTHO05D005523 3.2e-23 111.7 98 60.2
Gohir.D09G112900 Gossypium hirsutum HOM05D004752 ORTHO05D005523 5.4e-23 110.9 100 59.0
AL2G31650 Arabidopsis lyrata HOM05D004752 ORTHO05D005523 7.1e-23 110.5 97 56.7
BraA07t30682Z Brassica rapa HOM05D004752 ORTHO05D005523 7.1e-23 110.5 98 59.2
CiPaw.05G229600 Carya illinoinensis HOM05D004752 ORTHO05D005523 7.1e-23 110.5 97 61.9
vmacro00760 Vaccinium macrocarpon HOM05D004752 ORTHO05D005523 7.1e-23 110.5 100 60.0
VMungo0720G2181 Vigna mungo HOM05D004752 ORTHO05D005523 7.1e-23 110.5 72 77.8
Gorai.006G130300 Gossypium raimondii HOM05D004752 ORTHO05D005523 1.2e-22 109.8 101 57.4
MSTRG.1541 Avicennia marina HOM05D004752 ORTHO05D005523 1.6e-22 109.4 98 60.2
Ciclev10002954m.g Citrus clementina HOM05D004752 ORTHO05D005523 1.6e-22 109.4 97 60.8
Eucgr.F02586 Eucalyptus grandis HOM05D004752 ORTHO05D005523 1.6e-22 109.4 104 58.7
arahy.Tifrunner.gnm1.ann1.0CG85F Arachis hypogaea HOM05D004752 ORTHO05D005523 2.7e-22 108.6 99 60.6
arahy.Tifrunner.gnm1.ann1.S21HCY Arachis hypogaea HOM05D004752 ORTHO05D005523 2.7e-22 108.6 99 60.6
AUR62022705 Chenopodium quinoa HOM05D004752 ORTHO05D005523 2.7e-22 108.6 96 62.5
Migut.C01286 Erythranthe guttata HOM05D004752 ORTHO05D005523 2.7e-22 108.6 98 61.2
SalBow6G5456 Salvia bowleyana HOM05D004752 ORTHO05D005523 6.0e-22 107.5 97 61.9
SalBow6G7070 Salvia bowleyana HOM05D004752 ORTHO05D005523 6.0e-22 107.5 97 61.9
Actinidia29420 Actinidia chinensis HOM05D004752 ORTHO05D005523 7.8e-22 107.1 100 60.0
Sabra19G0093300 Salix brachista HOM05D004752 ORTHO05D005523 1.3e-21 106.3 72 72.2
EL10Ac1g00098 Beta vulgaris HOM05D004752 ORTHO05D005523 1.7e-21 105.9 98 61.2
Actinidia03509 Actinidia chinensis HOM05D004752 ORTHO05D005523 3.0e-21 105.1 70 75.7
MD00G1104100 Malus domestica HOM05D004752 ORTHO05D005523 3.0e-21 105.1 95 60.0
Rhsim06G0089000 Rhododendron simsii HOM05D004752 ORTHO05D005523 3.0e-21 105.1 100 57.0
Rhsim11G0057800 Rhododendron simsii HOM05D004752 ORTHO05D005523 3.0e-21 105.1 100 57.0
AT1G72020 Arabidopsis thaliana HOM05D004752 ORTHO05D005523 3.9e-21 104.8 98 54.1
Lj4E474T0 Lonicera japonica HOM05D004752 ORTHO05D005523 3.9e-21 104.8 70 75.7
Os04g0432600 Oryza sativa ssp. japonica HOM05D004752 ORTHO05D005523 3.9e-21 104.8 96 59.4
ECA247G0381 Erigeron canadensis HOM05D004752 ORTHO05D005523 5.1e-21 104.4 97 61.9
HanXRQChr04g0109661 Helianthus annuus HOM05D004752 ORTHO05D005523 5.1e-21 104.4 98 60.2
Nitab4.5_0000303g0280 Nicotiana tabacum HOM05D004752 ORTHO05D005523 5.1e-21 104.4 98 56.1
Nitab4.5_0001082g0040 Nicotiana tabacum HOM05D004752 ORTHO05D005523 5.1e-21 104.4 98 56.1
SalBow6G0286 Salvia bowleyana HOM05D004752 ORTHO05D005523 8.6e-21 103.6 70 71.4
SalBow6G5891 Salvia bowleyana HOM05D004752 ORTHO05D005523 8.6e-21 103.6 70 71.4
Sc01g0001860 Simmondsia chinensis HOM05D004752 ORTHO05D005523 1.1e-20 103.2 70 71.4
DCAR_011527 Daucus carota HOM05D004752 ORTHO05D005523 1.5e-20 102.8 98 56.1
PGSC0003DMG400026069 Solanum tuberosum HOM05D004752 ORTHO05D005523 1.5e-20 102.8 98 60.2
Duzib177G0197 Durio zibethinus HOM05D004752 ORTHO05D005523 1.9e-20 102.4 100 57.0
Peaxi162Scf00268g00615 Petunia axillaris HOM05D004752 ORTHO05D005523 1.9e-20 102.4 98 58.2
unitig_0.g2130 Utricularia gibba HOM05D004752 ORTHO05D005523 1.9e-20 102.4 97 57.7
GSVIVG01012767001 Vitis vinifera HOM05D004752 ORTHO05D005523 1.9e-20 102.4 107 52.3
AUR62004632 Chenopodium quinoa HOM05D004752 ORTHO05D005523 3.3e-20 101.7 108 55.6
MBI17_g21481_MAGBIO Magnolia biondii HOM05D004752 ORTHO05D005523 5.6e-20 100.9 68 72.1
Zm00001eb082670 Zea mays HOM05D004752 ORTHO05D005523 5.6e-20 100.9 94 59.6
FAN02G3062 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.2e-19 99.8 70 72.9
Nitab4.5_0000365g0250 Nicotiana tabacum HOM05D004752 ORTHO05D005523 1.2e-19 99.8 89 57.3
Rhsim11G0056800 Rhododendron simsii HOM05D004752 ORTHO05D005523 1.2e-19 99.8 73 67.1
Zm00001eb243470 Zea mays HOM05D004752 ORTHO05D005523 1.2e-19 99.8 96 56.2
MD15G1358900 Malus domestica HOM05D004752 ORTHO05D005523 2.8e-19 98.6 96 53.1
SGA_v2.0_scaffold118G32535 Striga asiatica HOM05D003880 ORTHO05D004959 6.2e-19 97.4 70 70.0
MSTRG.25459 Avicennia marina HOM05D004752 ORTHO05D005523 8.1e-19 97.1 99 56.6
FAN18G0607 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.1e-18 96.7 70 71.4
FAN18G1874 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.1e-18 96.7 70 71.4
FAN18G2073 Fragaria x ananassa HOM05D004752 ORTHO05D005523 1.1e-18 96.7 70 71.4
Solyc06g065180.3 Solanum lycopersicum HOM05D004752 ORTHO05D005523 1.8e-18 95.9 97 56.7
ATR0071G025 Amborella trichopoda HOM05D004752 ORTHO05D005523 2.3e-18 95.5 76 64.5
Sopen06g023680 Solanum pennellii HOM05D004752 ORTHO05D005523 4.0e-18 94.7 97 56.7
Nitab4.5_0003010g0020 Nicotiana tabacum HOM05D004752 ORTHO05D005523 8.9e-18 93.6 89 56.2
Lsat_1_v5_gn_1_12481 Lactuca sativa HOM05D004752 ORTHO05D005523 1.2e-17 93.2 99 54.5
HPP92_000079 Vanilla planifolia HOM05D004752 ORTHO05D005523 1.2e-17 93.2 61 73.8
Peaxi162Scf00391g00436 Petunia axillaris HOM05D004752 ORTHO05D005523 2.6e-17 92.0 86 55.8
PGSC0003DMG400009277 Solanum tuberosum HOM05D004752 ORTHO05D005523 2.6e-17 92.0 92 58.7
SHI09031 Sapria himalayana HOM05D004752 ORTHO05D005523 9.9e-17 90.1 70 62.9
SEGI_26065 Sequoiadendron giganteum HOM05D004752 ORTHO05D005523 2.9e-16 88.6 86 55.8
Gohir.A09G115700 Gossypium hirsutum HOM05D004752 ORTHO05D005523 3.7e-16 88.2 69 65.2
unitig_747.g21474 Utricularia gibba HOM05D004752 ORTHO05D005523 7.1e-15 84.0 82 58.5
CBR_g3658 Chara braunii HOM05D004752 ORTHO05D005523 3.4e-09 65.1 81 43.2
AagrBONN_evm.TU.Sc2ySwM_117.1418 Anthoceros agrestis HOM05D004752 ORTHO05D005523 9.9e-09 63.5 73 47.9
Mapoly0001s0236 Marchantia polymorpha HOM05D004752 ORTHO05D005523 9.9e-09 63.5 89 46.1
Pp3c19_1780 Physcomitrium patens HOM05D004752 ORTHO05D005523 7.1e-07 57.4 67 44.8


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