Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0522 Ceratophyllum demersum HOM05D006019 ORTHO05D007900 2.4e-240 835.1 427 100.0
TAR629G1914 Trochodendron aralioides HOM05D006019 ORTHO05D007900 1.6e-146 523.5 434 63.1
CSS0000535 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 2.1e-143 513.1 406 64.0
CSS0042888 Camellia sinensis var. sinensis HOM05D006019 ORTHO05D007900 8.0e-143 511.1 399 65.2
Dinv22232 Davidia involucrata HOM05D006019 ORTHO05D007900 1.4e-142 510.4 404 64.4
Nn1g07344 Nelumbo nucifera HOM05D006019 ORTHO05D007900 2.3e-142 509.6 412 63.8
GSVIVG01037722001 Vitis vinifera HOM05D006019 ORTHO05D007900 2.6e-141 506.1 410 62.7
LjContig00272g0018197 Lotus japonicus HOM05D006019 ORTHO05D007900 3.7e-140 502.3 415 63.4
QL08p020269 Quercus lobata HOM05D006019 ORTHO05D007900 5.3e-139 498.4 430 61.4
MBI19_g29437_MAGBIO Magnolia biondii HOM05D006019 ORTHO05D007900 9.1e-139 497.7 401 64.6
ClCG10G005120 Citrullus lanatus HOM05D006019 ORTHO05D007900 4.5e-138 495.4 396 62.9
Eucgr.F03504 Eucalyptus grandis HOM05D006019 ORTHO05D007900 2.2e-137 493.0 375 64.8
Atru.chr2.3529 Acer truncatum HOM05D006019 ORTHO05D007900 2.5e-136 489.6 400 62.8
RcHm_v2.0_Chr5g0041541 Rosa chinensis HOM05D006019 ORTHO05D007900 2.5e-136 489.6 356 67.7
Glyma.02G294900 Glycine max HOM05D006019 ORTHO05D007900 9.4e-136 487.6 411 62.0
VMungo0647G0128 Vigna mungo HOM05D006019 ORTHO05D007900 1.2e-135 487.3 401 63.3
Atru.chr2.3549 Acer truncatum HOM05D006019 ORTHO05D007900 1.6e-135 486.9 389 63.8
FvH4_3g23540 Fragaria vesca HOM05D006019 ORTHO05D007900 2.1e-135 486.5 368 64.9
COL.COLO4_09733 Corchorus olitorius HOM05D006019 ORTHO05D007900 2.7e-135 486.1 376 64.9
arahy.Tifrunner.gnm1.ann1.G2L6CM Arachis hypogaea HOM05D006019 ORTHO05D007900 4.7e-135 485.3 331 68.9
Lalb_Chr04g0248161 Lupinus albus HOM05D006019 ORTHO05D007900 4.7e-135 485.3 409 61.6
Actinidia35369 Actinidia chinensis HOM05D006019 ORTHO05D007900 6.1e-135 485.0 370 65.9
Haze_09462 Corylus avellana HOM05D006019 ORTHO05D007900 8.0e-135 484.6 338 71.0
CsaV3_3G004800 Cucumis sativus L. HOM05D006019 ORTHO05D007900 1.0e-134 484.2 402 61.7
MELO3C014178.2 Cucumis melo HOM05D006019 ORTHO05D007900 1.8e-134 483.4 402 61.4
FAN21G2609 Fragaria x ananassa HOM05D006019 ORTHO05D007900 4.0e-134 482.3 368 64.9
TPR.G35353 Trifolium pratense HOM05D006019 ORTHO05D007900 1.5e-133 480.3 405 62.5
FAN25G1378 Fragaria x ananassa HOM05D006019 ORTHO05D007900 2.6e-133 479.6 368 63.9
vmacro09689 Vaccinium macrocarpon HOM05D006019 ORTHO05D007900 3.4e-133 479.2 342 68.7
Phvul.008G272400 Phaseolus vulgaris HOM05D006019 ORTHO05D007900 4.4e-133 478.8 393 61.3
Thecc.07G028300 Theobroma cacao HOM05D006019 ORTHO05D007900 5.7e-133 478.4 376 64.6
Gorai.002G093600 Gossypium raimondii HOM05D006019 ORTHO05D007900 1.3e-132 477.2 348 67.0
Peaxi162Scf00235g00727 Petunia axillaris HOM05D006019 ORTHO05D007900 1.7e-132 476.9 402 60.7
Potri.015G065900 Populus trichocarpa HOM05D006019 ORTHO05D007900 1.7e-132 476.9 387 62.3
Glyma.14G018700 Glycine max HOM05D006019 ORTHO05D007900 2.2e-132 476.5 380 63.2
CiPaw.11G172700 Carya illinoinensis HOM05D006019 ORTHO05D007900 2.8e-132 476.1 405 60.5
Duzib213G0195 Durio zibethinus HOM05D006019 ORTHO05D007900 2.8e-132 476.1 405 61.5
Gohir.D01G070900 Gossypium hirsutum HOM05D006019 ORTHO05D007900 3.7e-132 475.7 348 67.0
Manes.03G136600 Manihot esculenta HOM05D006019 ORTHO05D007900 4.8e-132 475.3 402 60.0
Sabra15G0091100 Salix brachista HOM05D006019 ORTHO05D007900 4.8e-132 475.3 385 61.6
Gohir.A01G084500 Gossypium hirsutum HOM05D006019 ORTHO05D007900 6.3e-132 474.9 348 66.7
Prupe.4G223000 Prunus persica HOM05D006019 ORTHO05D007900 8.3e-132 474.6 366 64.5
Cc05_g14300 Coffea canephora HOM05D006019 ORTHO05D007900 1.1e-131 474.2 401 59.1
Medtr5g093830 Medicago truncatula HOM05D006019 ORTHO05D007900 1.4e-131 473.8 407 61.7
Ciclev10007944m.g Citrus clementina HOM05D006019 ORTHO05D007900 1.2e-130 470.7 399 60.9
THA.LOC104817684 Tarenaya hassleriana HOM05D006019 ORTHO05D007900 3.5e-130 469.2 385 60.8
Oeu026379.1 Olea europaea HOM05D006019 ORTHO05D007900 5.9e-130 468.4 346 66.8
PGR031G3909 Punica granatum HOM05D006019 ORTHO05D007900 7.7e-130 468.0 395 59.0
MD11G1209500 Malus domestica HOM05D006019 ORTHO05D007900 2.9e-129 466.1 387 61.2
Aqoxy1G02863 Aquilegia oxysepala HOM05D006019 ORTHO05D007900 3.8e-129 465.7 344 66.0
Migut.M01708 Erythranthe guttata HOM05D006019 ORTHO05D007900 1.5e-128 463.8 381 61.9
Nitab4.5_0000984g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 1.9e-128 463.4 411 58.2
AUR62020342 Chenopodium quinoa HOM05D006019 ORTHO05D007900 2.5e-128 463.0 409 58.2
Sed0026759 Sechium edule HOM05D006019 ORTHO05D007900 4.2e-128 462.2 332 67.5
CANSAT11G1049 Cannabis sativa HOM05D006019 ORTHO05D007900 5.5e-128 461.8 423 55.8
PSO541G6030 Papaver somniferum HOM05D006019 ORTHO05D007900 7.2e-128 461.5 365 63.0
arahy.Tifrunner.gnm1.ann1.PR9FWM Arachis hypogaea HOM05D006019 ORTHO05D007900 9.5e-128 461.1 324 67.0
TWI39G1205 Tripterygium wilfordii HOM05D006019 ORTHO05D007900 9.5e-128 461.1 386 60.1
AUR62015881 Chenopodium quinoa HOM05D006019 ORTHO05D007900 1.2e-127 460.7 389 59.9
PSO675G6628 Papaver somniferum HOM05D006019 ORTHO05D007900 2.1e-127 459.9 365 62.7
Psat2g009800 Pisum sativum HOM05D006019 ORTHO05D007900 2.1e-127 459.9 410 58.8
Nitab4.5_0002826g0040 Nicotiana tabacum HOM05D006019 ORTHO05D007900 3.6e-127 459.1 363 62.3
PGSC0003DMG400022300 Solanum tuberosum HOM05D006019 ORTHO05D007900 2.3e-126 456.4 407 57.0
CAN.G337.58 Capsicum annuum HOM05D006019 ORTHO05D007900 3.0e-126 456.1 409 56.2
HanXRQChr13g0408251 Helianthus annuus HOM05D006019 ORTHO05D007900 3.0e-126 456.1 397 56.2
Sopen07g033150 Solanum pennellii HOM05D006019 ORTHO05D007900 4.0e-126 455.7 364 60.2
EL10Ac4g07692 Beta vulgaris HOM05D006019 ORTHO05D007900 8.9e-126 454.5 437 57.2
Rhsim04G0016400 Rhododendron simsii HOM05D006019 ORTHO05D000403 8.9e-126 454.5 412 57.8
Solyc07g064950.3 Solanum lycopersicum HOM05D006019 ORTHO05D007900 1.2e-125 454.1 377 58.9
Os06g0308000 Oryza sativa ssp. japonica HOM05D006019 ORTHO05D007900 2.6e-125 453.0 373 60.9
Ah.06g182250 Amaranthus hybridus HOM05D006019 ORTHO05D007900 2.2e-124 449.9 401 58.6
Aa31LG3G11210 Aethionema arabicum HOM05D006019 ORTHO05D007900 2.8e-124 449.5 365 59.2
Cpa.g.sc284.5 Carica papaya HOM05D006019 ORTHO05D007900 2.8e-124 449.5 439 55.6
Thhalv10013195m.g Eutrema salsugineum HOM05D006019 ORTHO05D007900 2.8e-124 449.5 386 57.3
ECA240G2757 Erigeron canadensis HOM05D006019 ORTHO05D007900 8.3e-124 448.0 408 54.9
Sp6g17150 Schrenkiella parvula HOM05D006019 ORTHO05D007900 1.4e-123 447.2 367 59.1
DCAR_017106 Daucus carota HOM05D006019 ORTHO05D007900 2.4e-123 446.4 315 68.3
BcaB05g22192 Brassica carinata HOM05D006019 ORTHO05D007900 3.1e-123 446.0 373 57.6
Lj1C880T10 Lonicera japonica HOM05D006019 ORTHO05D007900 4.1e-123 445.7 402 59.2
Lsat_1_v5_gn_9_90660 Lactuca sativa HOM05D006019 ORTHO05D007900 2.0e-122 443.4 394 55.1
HanXRQChr03g0076861 Helianthus annuus HOM05D006019 ORTHO05D007900 2.7e-122 443.0 391 57.5
ATR1128G029 Amborella trichopoda HOM05D006019 ORTHO05D007900 1.0e-121 441.0 315 67.3
C02p16310 Brassica napus HOM05D006019 ORTHO05D000403 1.0e-121 441.0 377 57.0
Ca_06346_v3 Cicer arietinum L. HOM05D006019 ORTHO05D007900 1.3e-121 440.7 314 67.5
AL8G30770 Arabidopsis lyrata HOM05D006019 ORTHO05D007900 2.3e-121 439.9 367 57.8
BcaC03g14252 Brassica carinata HOM05D006019 ORTHO05D007900 2.9e-121 439.5 384 55.7
BolC2t07733H Brassica oleracea HOM05D006019 ORTHO05D007900 2.9e-121 439.5 384 55.7
AT5G55220 Arabidopsis thaliana HOM05D006019 ORTHO05D007900 5.0e-121 438.7 367 57.8
A02p09780 Brassica napus HOM05D006019 ORTHO05D000403 6.6e-121 438.3 384 55.7
Zm00001eb405570 Zea mays HOM05D006019 ORTHO05D007900 8.6e-121 438.0 355 61.7
BraA02t06043Z Brassica rapa HOM05D006019 ORTHO05D007900 1.5e-120 437.2 365 57.5
Carub.0008s1557 Capsella rubella HOM05D006019 ORTHO05D007900 1.5e-120 437.2 387 56.1
FAN11G0939 Fragaria x ananassa HOM05D006019 ORTHO05D007900 7.3e-120 434.9 331 63.7
CARHR268580 Cardamine hirsuta HOM05D006019 ORTHO05D007900 1.6e-119 433.7 386 56.7
SGA_v2.0_scaffold171G38908 Striga asiatica HOM05D006019 ORTHO05D007900 1.1e-112 411.0 361 58.4
Sc16g0005740 Simmondsia chinensis HOM05D006019 ORTHO05D007900 2.1e-111 406.8 422 53.3
FAN16G2690 Fragaria x ananassa HOM05D006019 ORTHO05D007900 3.6e-111 406.0 368 56.8
Hund01957 Selenicereus undatus HOM05D006019 ORTHO05D007900 6.4e-108 395.2 401 54.9
SalBow8G4839 Salvia bowleyana HOM05D006019 ORTHO05D007900 3.2e-107 392.9 407 53.1
SEGI_28230 Sequoiadendron giganteum HOM05D006019 ORTHO05D007900 3.2e-107 392.9 348 54.9
FAN25G3210 Fragaria x ananassa HOM05D006019 ORTHO05D007900 1.6e-103 380.6 373 55.0
BcaC03g14251 Brassica carinata HOM05D006019 ORTHO05D007900 1.1e-99 367.9 385 49.6
Mapoly0157s0020 Marchantia polymorpha HOM05D006019 ORTHO05D007900 4.0e-94 349.4 350 49.1
Pp3c11_10950 Physcomitrium patens HOM05D006019 ORTHO05D007900 7.1e-91 338.6 396 44.4
Pp3c2_30270 Physcomitrium patens HOM05D006019 ORTHO05D007900 9.2e-91 338.2 366 45.9
AagrBONN_evm.TU.Sc2ySwM_228.3732 Anthoceros agrestis HOM05D006019 ORTHO05D007900 1.2e-90 337.8 335 49.0
unitig_22.g6170 Utricularia gibba HOM05D006019 ORTHO05D007900 2.0e-85 320.5 245 65.3
CBR_g21850 Chara braunii HOM05D006019 ORTHO05D007900 9.0e-78 295.0 356 41.6
SMO361G0007 Selaginella moellendorffii HOM05D006019 ORTHO05D007900 2.2e-76 290.4 320 44.7
MCO13G367 Micromonas commoda HOM05D006019 ORTHO05D007900 4.2e-51 206.5 372 32.3
VMungo0464G1494 Vigna mungo HOM05D006019 ORTHO05D007900 6.3e-47 192.6 134 68.7
HPP92_015779 Vanilla planifolia HOM05D006019 ORTHO05D007900 1.8e-46 191.0 246 46.7
Glyma.14G020800 Glycine max HOM05D006019 ORTHO05D007900 8.5e-44 182.2 136 64.7
Oeu026380.1 Olea europaea HOM05D006019 ORTHO05D007900 2.8e-39 167.2 141 60.3
PRCOL_00002693 Prasinoderma coloniale HOM05D006019 ORTHO05D007900 4.8e-39 166.4 301 30.9
A10p12490 Brassica napus HOM05D006019 ORTHO05D007900 1.8e-25 121.3 292 33.2
Glyma.14G020666 Glycine max HOM05D006019 ORTHO05D007900 2.8e-23 114.0 92 60.9
VMungo0647G0792 Vigna mungo HOM05D006019 ORTHO05D007900 1.8e-22 111.3 94 63.8
BolC9t57451H Brassica oleracea HOM05D006019 ORTHO05D007900 1.1e-19 102.1 204 31.9
Cre01.g001750 Chlamydomonas reinhardtii HOM05D006019 ORTHO05D007900 5.5e-19 99.8 351 22.5
BraA10t43342Z Brassica rapa HOM05D006019 ORTHO05D007900 1.0e-17 95.5 208 32.2
C09p45770 Brassica napus HOM05D006019 ORTHO05D007900 3.0e-17 94.0 229 28.8
Ca_29171_v3 Cicer arietinum L. HOM05D006019 ORTHO05D003051 8.6e-12 75.9 326 22.4
unitig_22.g6169 Utricularia gibba HOM05D006019 ORTHO05D007900 1.0e-09 68.9 53 58.5


User provided reference genes

Program Settings