Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0491 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 6.7e-198 693.7 329 100.0
Medtr3g102800 Medicago truncatula HOM05D006600 ORTHO05D008446 7.5e-157 557.4 329 78.1
PSO675G8764 Papaver somniferum HOM05D006600 ORTHO05D008446 6.3e-156 554.3 328 77.1
Psat5g038240 Pisum sativum HOM05D006600 ORTHO05D008446 8.3e-156 553.9 329 78.1
TPR.G33718 Trifolium pratense HOM05D006600 ORTHO05D008446 5.4e-155 551.2 327 77.4
MBI16_g13383_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D008446 1.7e-153 546.2 327 77.7
THA.LOC104807092 Tarenaya hassleriana HOM05D006600 ORTHO05D008446 3.8e-153 545.0 330 76.7
QL12p037547 Quercus lobata HOM05D006600 ORTHO05D008446 2.1e-151 539.3 325 76.9
CiPaw.08G048500 Carya illinoinensis HOM05D006600 ORTHO05D008446 8.0e-151 537.3 327 77.1
Glyma.04G044500 Glycine max HOM05D006600 ORTHO05D008446 1.3e-148 530.0 327 74.3
Sabra14G0012400 Salix brachista HOM05D006600 ORTHO05D008446 1.7e-148 529.6 326 74.8
Ah.15g092540 Amaranthus hybridus HOM05D006600 ORTHO05D008446 2.2e-148 529.3 330 72.7
HanXRQChr10g0304021 Helianthus annuus HOM05D006600 ORTHO05D008446 6.3e-148 527.7 326 74.8
Manes.18G044200 Manihot esculenta HOM05D006600 ORTHO05D008446 4.1e-147 525.0 328 74.1
AUR62038783 Chenopodium quinoa HOM05D006600 ORTHO05D008446 7.0e-147 524.2 329 72.6
unitig_62.g23648 Utricularia gibba HOM05D006600 ORTHO05D008446 1.6e-146 523.1 325 73.2
Oeu050861.1 Olea europaea HOM05D006600 ORTHO05D008446 2.7e-146 522.3 326 74.5
SGA_v2.0_scaffold244G44349 Striga asiatica HOM05D006600 ORTHO05D008446 1.3e-145 520.0 327 74.0
Sopen04g031730 Solanum pennellii HOM05D006600 ORTHO05D008446 2.5e-144 515.8 326 72.7
Thecc.08G092000 Theobroma cacao HOM05D006600 ORTHO05D008446 2.1e-143 512.7 328 72.6
Solyc04g078120.3 Solanum lycopersicum HOM05D006600 ORTHO05D008446 2.8e-143 512.3 326 72.4
Nitab4.5_0003228g0070 Nicotiana tabacum HOM05D006600 ORTHO05D008446 8.9e-142 507.3 328 71.3
PSO541G2868 Papaver somniferum HOM05D006600 ORTHO05D008446 1.5e-141 506.5 328 71.3
BolC3t18247H Brassica oleracea HOM05D006600 ORTHO05D008446 2.0e-141 506.1 326 71.8
Nitab4.5_0000934g0020 Nicotiana tabacum HOM05D006600 ORTHO05D008446 9.8e-141 503.8 328 70.4
C03p59830 Brassica napus HOM05D006600 ORTHO05D008446 1.3e-140 503.4 326 71.5
Lj4A761T87 Lonicera japonica HOM05D006600 ORTHO05D008446 1.7e-140 503.1 290 79.7
BraA06t26199Z Brassica rapa HOM05D006600 ORTHO05D008446 3.7e-140 501.9 326 70.9
A06p32700 Brassica napus HOM05D006600 ORTHO05D008446 6.4e-140 501.1 326 70.9
HPP92_018760 Vanilla planifolia HOM05D006600 ORTHO05D008446 3.2e-139 498.8 324 71.3
BcaB02g09901 Brassica carinata HOM05D006600 ORTHO05D008446 7.0e-139 497.7 326 70.2
CAN.G1054.24 Capsicum annuum HOM05D006600 ORTHO05D008446 1.3e-137 493.4 290 77.2
AUR62037454 Chenopodium quinoa HOM05D006600 ORTHO05D008446 2.5e-136 489.2 324 69.8
Thhalv10005718m.g Eutrema salsugineum HOM05D006600 ORTHO05D008446 2.1e-135 486.1 326 69.6
Os03g0761200 Oryza sativa ssp. japonica HOM05D006600 ORTHO05D008446 4.4e-133 478.4 326 66.0
Zm00001eb214310 Zea mays HOM05D006600 ORTHO05D008446 1.3e-132 476.9 326 66.3
AT5G65860 Arabidopsis thaliana HOM05D006600 ORTHO05D008446 5.4e-131 471.5 326 67.8
BcaC01g02830 Brassica carinata HOM05D006600 ORTHO05D008446 2.0e-130 469.5 288 74.7
Ca_15912_v3 Cicer arietinum L. HOM05D006600 ORTHO05D008446 2.0e-130 469.5 329 67.5
Atru.chr13.803 Acer truncatum HOM05D006600 ORTHO05D008446 1.6e-127 459.9 328 67.7
FAN20G2273 Fragaria x ananassa HOM05D006600 ORTHO05D008446 8.1e-127 457.6 327 66.4
Rhsim07G0222000 Rhododendron simsii HOM05D006600 ORTHO05D008446 1.1e-126 457.2 326 67.8
PGSC0003DMG400021533 Solanum tuberosum HOM05D006600 ORTHO05D008446 1.4e-126 456.8 326 66.0
arahy.Tifrunner.gnm1.ann1.UTGV4K Arachis hypogaea HOM05D006600 ORTHO05D008446 2.3e-126 456.1 328 67.1
COL.COLO4_28538 Corchorus olitorius HOM05D006600 ORTHO05D008446 2.3e-126 456.1 337 65.0
arahy.Tifrunner.gnm1.ann1.H62KW4 Arachis hypogaea HOM05D006600 ORTHO05D008446 6.8e-126 454.5 328 67.1
VMungo1309G2568 Vigna mungo HOM05D006600 ORTHO05D008446 6.8e-126 454.5 327 66.7
TAR625G0631 Trochodendron aralioides HOM05D006600 ORTHO05D008446 1.2e-125 453.8 328 67.1
CSS0036700 Camellia sinensis var. sinensis HOM05D006600 ORTHO05D008446 2.0e-125 453.0 328 66.2
Lalb_Chr23g0267431 Lupinus albus HOM05D006600 ORTHO05D008446 2.0e-125 453.0 328 66.2
Cfa013668 Carpinus fangiana HOM05D006600 ORTHO05D008446 2.6e-125 452.6 326 66.6
CsaV3_2G026260 Cucumis sativus L. HOM05D006600 ORTHO05D008446 3.4e-125 452.2 328 66.2
Glyma.06G045000 Glycine max HOM05D006600 ORTHO05D008446 3.4e-125 452.2 327 66.7
MSTRG.1040 Avicennia marina HOM05D006600 ORTHO05D008446 4.4e-125 451.8 328 65.5
Dinv44978 Davidia involucrata HOM05D006600 ORTHO05D008446 4.4e-125 451.8 328 66.5
Aqoxy6G02751 Aquilegia oxysepala HOM05D006600 ORTHO05D008446 9.9e-125 450.7 327 66.4
Phvul.009G070400 Phaseolus vulgaris HOM05D006600 ORTHO05D008446 9.9e-125 450.7 327 66.7
PGR083G0558 Punica granatum HOM05D006600 ORTHO05D008446 9.9e-125 450.7 328 66.2
Lj1g0008642 Lotus japonicus HOM05D006600 ORTHO05D008446 2.2e-124 449.5 324 66.0
Gorai.009G217900 Gossypium raimondii HOM05D006600 ORTHO05D008446 2.9e-124 449.1 328 65.9
MD08G1088100 Malus domestica HOM05D006600 ORTHO05D008446 4.9e-124 448.4 328 66.5
SMO228G0045 Selaginella moellendorffii HOM05D006600 ORTHO05D008446 6.4e-124 448.0 326 61.3
TWI56G0382 Tripterygium wilfordii HOM05D006600 ORTHO05D008446 8.3e-124 447.6 326 66.6
Ciclev10001599m.g Citrus clementina HOM05D006600 ORTHO05D008446 1.4e-123 446.8 328 66.2
Lsat_1_v5_gn_6_112481 Lactuca sativa HOM05D006600 ORTHO05D008446 1.4e-123 446.8 328 66.2
Prupe.1G425800 Prunus persica HOM05D006600 ORTHO05D008446 1.4e-123 446.8 328 65.9
Gohir.A05G207900 Gossypium hirsutum HOM05D006600 ORTHO05D008446 7.1e-123 444.5 328 64.9
GSVIVG01009372001 Vitis vinifera HOM05D006600 ORTHO05D008446 7.1e-123 444.5 254 79.9
ClCG08G016350 Citrullus lanatus HOM05D006600 ORTHO05D008446 1.6e-122 443.4 328 64.6
Gohir.D05G211400 Gossypium hirsutum HOM05D006600 ORTHO05D008446 1.6e-122 443.4 328 65.5
DCAR_020080 Daucus carota HOM05D006600 ORTHO05D008446 2.1e-122 443.0 328 65.2
Peaxi162Scf00081g00125 Petunia axillaris HOM05D006600 ORTHO05D008446 4.6e-122 441.8 327 63.9
Carub.0008s2674 Capsella rubella HOM05D006600 ORTHO05D008446 6.0e-122 441.4 325 64.3
MELO3C010818.2 Cucumis melo HOM05D006600 ORTHO05D008446 1.3e-121 440.3 328 64.9
SalBow7G4697 Salvia bowleyana HOM05D006600 ORTHO05D008446 2.3e-121 439.5 328 64.9
Migut.C00501 Erythranthe guttata HOM05D006600 ORTHO05D008446 3.9e-121 438.7 328 64.9
CANSAT35G1599 Cannabis sativa HOM05D006600 ORTHO05D008446 2.5e-120 436.0 327 65.4
Hma1.2p1_0923F.1_g236990 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 2.5e-120 436.0 328 64.9
Sed0004073 Sechium edule HOM05D006600 ORTHO05D008446 3.3e-120 435.6 326 64.1
vmacro04585 Vaccinium macrocarpon HOM05D006600 ORTHO05D008446 7.3e-120 434.5 324 64.8
Actinidia38095 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.6e-119 433.3 327 63.6
Cc10_g05550 Coffea canephora HOM05D006600 ORTHO05D008446 1.6e-119 433.3 327 63.9
Eucgr.F00122 Eucalyptus grandis HOM05D006600 ORTHO05D008446 2.1e-119 433.0 328 64.3
Haze_22302 Corylus avellana HOM05D006600 ORTHO05D008446 6.2e-119 431.4 326 64.7
CARHR279850 Cardamine hirsuta HOM05D006600 ORTHO05D008446 1.2e-117 427.2 332 61.7
EL10As7g23812 Beta vulgaris HOM05D006600 ORTHO05D008446 2.6e-117 426.0 373 56.8
FAN15G1504 Fragaria x ananassa HOM05D006600 ORTHO05D008446 1.3e-116 423.7 327 62.7
Sp2g28940 Schrenkiella parvula HOM05D006600 ORTHO05D008446 1.3e-116 423.7 326 62.6
FvH4_2g33350 Fragaria vesca HOM05D006600 ORTHO05D008446 1.7e-116 423.3 332 62.3
FAN24G1058 Fragaria x ananassa HOM05D006600 ORTHO05D008446 2.9e-116 422.5 332 62.3
RcHm_v2.0_Chr6g0309231 Rosa chinensis HOM05D006600 ORTHO05D008446 3.8e-116 422.2 331 62.5
ATR0030G048 Amborella trichopoda HOM05D006600 ORTHO05D008446 4.9e-116 421.8 328 61.6
Duzib093G2027 Durio zibethinus HOM05D006600 ORTHO05D008446 4.1e-115 418.7 263 74.1
Cpa.g.sc21.115 Carica papaya HOM05D006600 ORTHO05D008446 1.3e-113 413.7 240 80.4
SEGI_28402 Sequoiadendron giganteum HOM05D006600 ORTHO05D008446 6.6e-113 411.4 321 61.1
FAN27G3009 Fragaria x ananassa HOM05D006600 ORTHO05D008446 3.3e-112 409.1 325 60.9
COL.COLO4_28541 Corchorus olitorius HOM05D006600 ORTHO05D008446 7.8e-106 387.9 248 74.2
Aa31LG1G16240 Aethionema arabicum HOM05D006600 ORTHO05D008446 1.6e-103 380.2 309 59.2
Nn1g04625 Nelumbo nucifera HOM05D006600 ORTHO05D008446 4.6e-98 362.1 328 56.1
Mapoly0063s0069 Marchantia polymorpha HOM05D006600 ORTHO05D008446 5.1e-97 358.6 327 52.0
Cre01.g050050 Chlamydomonas reinhardtii HOM05D006600 ORTHO05D008446 2.4e-94 349.7 375 45.6
AagrBONN_evm.TU.Sc2ySwM_228.1907 Anthoceros agrestis HOM05D006600 ORTHO05D008446 4.0e-94 349.0 238 65.1
ECA246G2737 Erigeron canadensis HOM05D006600 ORTHO05D008446 4.6e-90 335.5 266 60.9
Potri.014G019000 Populus trichocarpa HOM05D006600 ORTHO05D008446 5.6e-88 328.6 262 60.7
BcaC01g02829 Brassica carinata HOM05D006600 ORTHO05D008446 3.7e-87 325.9 228 67.5
Hma1.2p1_0923F.1_g236980 Hydrangea macrophylla HOM05D006600 ORTHO05D008446 3.1e-86 322.8 281 58.7
AL8G43570 Arabidopsis lyrata HOM05D006600 ORTHO05D008446 6.5e-76 288.5 251 55.8
Sc26g0004110 Simmondsia chinensis HOM05D006600 ORTHO05D008446 6.5e-76 288.5 253 55.7
MCO09G534 Micromonas commoda HOM05D006600 ORTHO05D008446 2.4e-70 270.0 335 40.0
Pp3c17_19880 Physcomitrium patens HOM05D006600 ORTHO05D008446 1.9e-67 260.4 249 49.8
CDE07G1425 Ceratophyllum demersum HOM05D006600 ORTHO05D008446 5.9e-61 238.8 124 87.9
MD15G1072900 Malus domestica HOM05D006600 ORTHO05D008446 7.2e-59 231.9 192 60.4
CBR_g40512 Chara braunii HOM05D000409 ORTHO05D000184 1.8e-57 227.3 188 56.4
TAR624G0301 Trochodendron aralioides HOM05D006600 ORTHO05D008446 5.3e-54 215.7 140 72.9
TAR374G0485 Trochodendron aralioides HOM05D000474 ORTHO05D003648 2.4e-46 190.3 128 68.8
Actinidia08258 Actinidia chinensis HOM05D006600 ORTHO05D008446 1.4e-38 164.5 95 76.8
CBR_g40511 Chara braunii HOM05D000019 ORTHO05D000002 2.3e-28 130.6 152 44.7
GSVIVG01038121001 Vitis vinifera HOM05D006600 ORTHO05D008446 2.6e-24 117.1 87 60.9
MBI16_g35586_MAGBIO Magnolia biondii HOM05D006600 ORTHO05D001493 3.4e-16 90.1 82 51.2
Oeu040380.1 Olea europaea HOM05D006600 ORTHO05D008446 5.8e-16 89.4 88 55.7
Actinidia08259 Actinidia chinensis HOM05D006600 ORTHO05D008446 4.0e-09 66.6 51 56.9
Dinv39240 Davidia involucrata HOM05D006600 ORTHO05D008446 7.5e-08 62.4 90 42.2
Prupe.6G259700 Prunus persica HOM05D037056 ORTHO05D335045 5.4e-06 56.2 37 67.6
Prupe.8G103600 Prunus persica HOM05D037056 ORTHO05D336041 7.1e-06 55.8 37 67.6


User provided reference genes

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