Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0450 Ceratophyllum demersum HOM05D007492 ORTHO05D009510 2.2e-49 198.7 109 100.0
TAR636G3489 Trochodendron aralioides HOM05D007492 ORTHO05D009510 1.0e-22 110.2 95 66.3
SalBow6G0030 Salvia bowleyana HOM05D007492 ORTHO05D009510 2.6e-21 105.5 96 59.4
SalBow6G0474 Salvia bowleyana HOM05D007492 ORTHO05D009510 2.6e-21 105.5 96 59.4
MSTRG.19841 Avicennia marina HOM05D007492 ORTHO05D009510 5.7e-21 104.4 96 58.3
Rhsim04G0106100 Rhododendron simsii HOM05D007492 ORTHO05D009510 7.5e-21 104.0 96 59.4
CiPaw.10G035300 Carya illinoinensis HOM05D007492 ORTHO05D009510 1.3e-20 103.2 95 64.2
Glyma.10G107400 Glycine max HOM05D007492 ORTHO05D009510 4.9e-20 101.3 96 62.5
Hma1.2p1_0005F.1_g004460 Hydrangea macrophylla HOM05D007492 ORTHO05D009510 6.3e-20 100.9 99 58.6
Psat0s33g0080 Pisum sativum HOM05D007492 ORTHO05D009510 8.3e-20 100.5 95 62.1
HPP92_012476 Vanilla planifolia HOM05D007492 ORTHO05D009510 1.1e-19 100.1 104 53.8
Oeu023131.1 Olea europaea HOM05D007492 ORTHO05D009510 1.4e-19 99.8 96 54.2
HPP92_012551 Vanilla planifolia HOM05D007492 ORTHO05D009510 1.4e-19 99.8 104 53.8
Cfa016781 Carpinus fangiana HOM05D007492 ORTHO05D009510 2.4e-19 99.0 95 61.1
Phvul.007G250800 Phaseolus vulgaris HOM05D007492 ORTHO05D009510 2.4e-19 99.0 97 58.8
Lalb_Chr21g0316561 Lupinus albus HOM05D007492 ORTHO05D009510 7.0e-19 97.4 115 53.0
QL07p003630 Quercus lobata HOM05D007492 ORTHO05D009510 1.2e-18 96.7 95 60.0
SGA_v2.0_scaffold105G30374 Striga asiatica HOM05D007492 ORTHO05D009510 1.6e-18 96.3 96 56.2
Medtr1g052270 Medicago truncatula HOM05D007492 ORTHO05D009510 2.7e-18 95.5 95 60.0
PGR004G0419 Punica granatum HOM05D007492 ORTHO05D009510 2.7e-18 95.5 100 56.0
Cc06_g18080 Coffea canephora HOM05D007492 ORTHO05D009510 5.9e-18 94.4 95 55.8
Dinv39655 Davidia involucrata HOM05D007492 ORTHO05D009510 5.9e-18 94.4 96 57.3
Migut.J01728 Erythranthe guttata HOM05D007492 ORTHO05D009510 5.9e-18 94.4 110 50.9
Actinidia38130 Actinidia chinensis HOM05D007492 ORTHO05D009510 7.8e-18 94.0 96 55.2
Lj5g0022766 Lotus japonicus HOM05D007492 ORTHO05D009510 7.8e-18 94.0 110 52.7
ATR0721G123 Amborella trichopoda HOM05D007492 ORTHO05D009510 2.3e-17 92.4 100 51.0
DCAR_013612 Daucus carota HOM05D007492 ORTHO05D009510 2.9e-17 92.0 98 51.0
Ca_12247_v3 Cicer arietinum L. HOM05D007492 ORTHO05D009510 6.6e-17 90.9 95 58.9
GSVIVG01033234001 Vitis vinifera HOM05D007492 ORTHO05D009510 1.1e-16 90.1 81 63.0
Gohir.D09G117400 Gossypium hirsutum HOM05D007492 ORTHO05D009510 1.5e-16 89.7 93 55.9
Gorai.006G135800 Gossypium raimondii HOM05D007492 ORTHO05D009510 1.5e-16 89.7 93 55.9
Manes.08G052300 Manihot esculenta HOM05D007492 ORTHO05D009510 2.5e-16 89.0 95 56.8
Duzib106G1025 Durio zibethinus HOM05D007492 ORTHO05D009510 3.3e-16 88.6 93 53.8
CANSAT80G1179 Cannabis sativa HOM05D007492 ORTHO05D009510 4.3e-16 88.2 91 58.2
Gohir.A09G121300 Gossypium hirsutum HOM05D007492 ORTHO05D009510 4.3e-16 88.2 93 55.9
ECA248G1814 Erigeron canadensis HOM05D007492 ORTHO05D009510 7.3e-16 87.4 92 54.3
Potri.006G046800 Populus trichocarpa HOM05D007492 ORTHO05D009510 7.3e-16 87.4 95 53.7
Sabra06G0032400 Salix brachista HOM05D007492 ORTHO05D009510 7.3e-16 87.4 94 55.3
HanXRQChr13g0395971 Helianthus annuus HOM05D007492 ORTHO05D009510 9.5e-16 87.0 91 57.1
arahy.Tifrunner.gnm1.ann1.BXP26X Arachis hypogaea HOM05D007492 ORTHO05D009510 1.2e-15 86.7 95 55.8
CANSAT80G0939 Cannabis sativa HOM05D007492 ORTHO05D009510 1.2e-15 86.7 91 57.1
Lsat_1_v5_gn_5_160860 Lactuca sativa HOM05D007492 ORTHO05D009510 1.6e-15 86.3 92 57.6
Sc19g0006630 Simmondsia chinensis HOM05D007492 ORTHO05D009510 1.6e-15 86.3 94 55.3
TWI77G0158 Tripterygium wilfordii HOM05D007492 ORTHO05D009510 1.6e-15 86.3 95 56.8
TPR.G19665 Trifolium pratense HOM05D007492 ORTHO05D009510 2.1e-15 85.9 110 50.9
arahy.Tifrunner.gnm1.ann1.7L65TE Arachis hypogaea HOM05D007492 ORTHO05D009510 2.8e-15 85.5 95 54.7
ClCG04G003670 Citrullus lanatus HOM05D007492 ORTHO05D009510 2.8e-15 85.5 92 52.2
Sed0027371 Sechium edule HOM05D007492 ORTHO05D009510 4.7e-15 84.7 95 52.6
MD12G1082300 Malus domestica HOM05D007492 ORTHO05D009510 6.1e-15 84.3 94 53.2
Thecc.05G151900 Theobroma cacao HOM05D007492 ORTHO05D009510 1.4e-14 83.2 100 51.0
Peaxi162Scf00130g00832 Petunia axillaris HOM05D007492 ORTHO05D009510 2.3e-14 82.4 87 49.4
Solyc04g150113.1 Solanum lycopersicum HOM05D007492 ORTHO05D009510 2.3e-14 82.4 96 49.0
Prupe.7G053700 Prunus persica HOM05D007492 ORTHO05D009510 4.0e-14 81.6 100 49.0
PGSC0003DMG400012711 Solanum tuberosum HOM05D007492 ORTHO05D009510 6.8e-14 80.9 96 46.9
Sopen04g008400 Solanum pennellii HOM05D007492 ORTHO05D009510 8.9e-14 80.5 96 47.9
Nitab4.5_0000826g0210 Nicotiana tabacum HOM05D007492 ORTHO05D009510 1.5e-13 79.7 96 50.0
Atru.chr1.1236 Acer truncatum HOM05D007492 ORTHO05D009510 4.4e-13 78.2 90 51.1
Eucgr.K01714 Eucalyptus grandis HOM05D007492 ORTHO05D009510 7.5e-13 77.4 97 49.5
Eucgr.K02018 Eucalyptus grandis HOM05D007492 ORTHO05D009510 7.5e-13 77.4 97 49.5
Os07g0661700 Oryza sativa ssp. japonica HOM05D007492 ORTHO05D009510 7.5e-13 77.4 95 49.5
vmacro09057 Vaccinium macrocarpon HOM05D007492 ORTHO05D009510 1.3e-12 76.6 78 53.8
BcaB02g07611 Brassica carinata HOM05D007492 ORTHO05D009510 1.7e-12 76.3 95 50.5
BcaC08g44833 Brassica carinata HOM05D007492 ORTHO05D009510 3.7e-12 75.1 95 49.5
C06p24390 Brassica napus HOM05D007492 ORTHO05D009510 3.7e-12 75.1 95 49.5
BraA07t29999Z Brassica rapa HOM05D007492 ORTHO05D009510 3.7e-12 75.1 95 49.5
THA.LOC104802018 Tarenaya hassleriana HOM05D007492 ORTHO05D009510 3.7e-12 75.1 94 47.9
BolC6t37587H Brassica oleracea HOM05D007492 ORTHO05D009510 4.9e-12 74.7 95 49.5
Zm00001eb329920 Zea mays HOM05D007492 ORTHO05D009510 8.3e-12 73.9 95 48.4
A07p23340 Brassica napus HOM05D007492 ORTHO05D009510 1.4e-11 73.2 95 48.4
FAN02G2710 Fragaria x ananassa HOM05D007492 ORTHO05D009510 1.4e-11 73.2 92 48.9
Hund19134 Selenicereus undatus HOM05D007492 ORTHO05D009510 1.9e-11 72.8 97 48.5
AL5G38860 Arabidopsis lyrata HOM05D007492 ORTHO05D009510 3.2e-11 72.0 95 48.4
FAN14G3877 Fragaria x ananassa HOM05D007492 ORTHO05D009510 3.2e-11 72.0 92 48.9
FAN05G0111 Fragaria x ananassa HOM05D007492 ORTHO05D009510 4.1e-11 71.6 92 47.8
RcHm_v2.0_Chr3g0483561 Rosa chinensis HOM05D007492 ORTHO05D009510 5.4e-11 71.2 94 47.9
AUR62026094 Chenopodium quinoa HOM05D007492 ORTHO05D009510 7.0e-11 70.9 99 48.5
Carub.0005s2417 Capsella rubella HOM05D007492 ORTHO05D009510 2.7e-10 68.9 95 46.3
CARHR167510 Cardamine hirsuta HOM05D007492 ORTHO05D009510 3.5e-10 68.6 99 47.5
Mapoly0061s0071 Marchantia polymorpha HOM05D007492 ORTHO05D009510 3.5e-10 68.6 98 42.9
Aa31LG10G12190 Aethionema arabicum HOM05D007492 ORTHO05D009510 4.6e-10 68.2 95 45.3
AagrBONN_evm.TU.Sc2ySwM_228.377 Anthoceros agrestis HOM05D007492 ORTHO05D009510 7.8e-10 67.4 93 43.0
Aqoxy2G00252 Aquilegia oxysepala HOM05D007492 ORTHO05D009510 7.8e-10 67.4 99 48.5
Cpa.g.sc1210.1 Carica papaya HOM05D007492 ORTHO05D009510 1.7e-09 66.2 91 45.1
MELO3C026338.2 Cucumis melo HOM05D007492 ORTHO05D009510 1.7e-09 66.2 64 56.2
Sp5g05280 Schrenkiella parvula HOM05D007492 ORTHO05D009510 1.7e-09 66.2 95 45.3
Ciclev10005969m.g Citrus clementina HOM05D007492 ORTHO05D009510 3.0e-09 65.5 133 36.8
Pp3c18_6860 Physcomitrium patens HOM05D007492 ORTHO05D009510 5.0e-09 64.7 94 44.7
Haze_19797 Corylus avellana HOM05D007492 ORTHO05D009510 1.1e-08 63.5 57 64.9
Haze_19793 Corylus avellana HOM05D007492 ORTHO05D009510 3.3e-08 62.0 57 63.2
EL10Ac3g07135 Beta vulgaris HOM05D007492 ORTHO05D009510 4.3e-08 61.6 99 44.4
MBI13_g15315_MAGBIO Magnolia biondii HOM05D007492 ORTHO05D009510 7.3e-08 60.8 144 35.4
MBI13_g30326_MAGBIO Magnolia biondii HOM05D007492 ORTHO05D009510 2.8e-07 58.9 77 49.4
Nitab4.5_0001618g0280 Nicotiana tabacum HOM05D007492 ORTHO05D009510 8.0e-07 57.4 80 42.5


User provided reference genes

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