Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0437 Ceratophyllum demersum HOM05D005681 ORTHO05D007274 7.5e-158 560.5 279 100.0
Ciclev10009066m.g Citrus clementina HOM05D005681 ORTHO05D007274 7.7e-78 294.7 276 55.4
CiPaw.08G024200 Carya illinoinensis HOM05D005681 ORTHO05D007274 3.8e-77 292.4 277 53.1
TWI32G1178 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 1.1e-76 290.8 274 54.4
Ca_15613_v3 Cicer arietinum L. HOM05D005681 ORTHO05D007274 5.5e-76 288.5 272 55.5
Dinv30262 Davidia involucrata HOM05D005681 ORTHO05D007274 1.6e-75 287.0 274 53.3
Atru.chr7.2148 Acer truncatum HOM05D005681 ORTHO05D007274 2.1e-75 286.6 274 54.4
Medtr3g110075 Medicago truncatula HOM05D005681 ORTHO05D007274 2.1e-75 286.6 272 55.1
Lj1g0012145 Lotus japonicus HOM05D005681 ORTHO05D007274 2.7e-75 286.2 273 53.8
Dinv14236 Davidia involucrata HOM05D005681 ORTHO05D007274 6.1e-75 285.0 273 53.5
TAR626G1886 Trochodendron aralioides HOM05D005681 ORTHO05D007274 7.9e-75 284.6 274 54.7
THA.LOC104803765 Tarenaya hassleriana HOM05D005681 ORTHO05D007274 1.8e-74 283.5 273 54.9
Manes.03G061300 Manihot esculenta HOM05D005681 ORTHO05D007274 2.3e-74 283.1 272 52.6
Psat0s2259g0040 Pisum sativum HOM05D005681 ORTHO05D007274 2.3e-74 283.1 271 55.0
Duzib150G0332 Durio zibethinus HOM05D005681 ORTHO05D007274 3.9e-74 282.3 273 52.7
PSO782G3698 Papaver somniferum HOM05D005681 ORTHO05D007274 3.9e-74 282.3 274 54.4
TWI34G0866 Tripterygium wilfordii HOM05D005681 ORTHO05D007274 6.7e-74 281.6 274 53.3
CSS0039623 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 8.8e-74 281.2 276 52.2
Potri.006G241200 Populus trichocarpa HOM05D005681 ORTHO05D007274 1.1e-73 280.8 272 52.9
Cfa013349 Carpinus fangiana HOM05D004668 ORTHO05D006460 2.0e-73 280.0 263 53.2
Gohir.A05G047800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.0e-73 280.0 273 53.5
Gohir.A06G095700 Gossypium hirsutum HOM05D005681 ORTHO05D007274 2.0e-73 280.0 273 52.7
Gorai.010G110300 Gossypium raimondii HOM05D005681 ORTHO05D007274 2.6e-73 279.6 273 52.7
Rhsim07G0152800 Rhododendron simsii HOM05D005681 ORTHO05D007274 2.6e-73 279.6 266 53.8
Nn3g18081 Nelumbo nucifera HOM05D005681 ORTHO05D007274 3.3e-73 279.3 262 57.3
PGR044G0773 Punica granatum HOM05D005681 ORTHO05D007274 4.4e-73 278.9 272 52.6
Gohir.D05G049900 Gossypium hirsutum HOM05D005681 ORTHO05D007274 5.7e-73 278.5 273 53.5
Actinidia31229 Actinidia chinensis HOM05D005681 ORTHO05D007274 7.4e-73 278.1 275 52.7
arahy.Tifrunner.gnm1.ann1.M4G12U Arachis hypogaea HOM05D005681 ORTHO05D007274 9.7e-73 277.7 272 51.8
Gorai.009G051200 Gossypium raimondii HOM05D005681 ORTHO05D007274 1.3e-72 277.3 273 53.5
vmacro05364 Vaccinium macrocarpon HOM05D005681 ORTHO05D007274 1.3e-72 277.3 266 52.6
arahy.Tifrunner.gnm1.ann1.Z4VD8H Arachis hypogaea HOM05D005681 ORTHO05D007274 2.2e-72 276.6 271 52.4
Hma1.2p1_0140F.1_g063453 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 2.2e-72 276.6 274 50.7
Hma1.2p1_0140F.1_g063456 Hydrangea macrophylla HOM05D005681 ORTHO05D007274 2.2e-72 276.6 274 50.7
Lalb_Chr08g0243221 Lupinus albus HOM05D005681 ORTHO05D007274 3.7e-72 275.8 275 52.0
Thecc.09G041100 Theobroma cacao HOM05D005681 ORTHO05D007274 3.7e-72 275.8 273 53.1
Glyma.04G080900 Glycine max HOM05D005681 ORTHO05D007274 4.8e-72 275.4 272 53.3
AUR62009315 Chenopodium quinoa HOM05D005681 ORTHO05D007274 8.2e-72 274.6 263 52.5
PSO566G0344 Papaver somniferum HOM05D005681 ORTHO05D007274 1.1e-71 274.2 274 52.6
ClCG08G012350 Citrullus lanatus HOM05D005681 ORTHO05D007274 1.4e-71 273.9 273 51.3
Peaxi162Scf00523g00017 Petunia axillaris HOM05D005681 ORTHO05D007274 1.4e-71 273.9 281 51.6
GSVIVG01035659001 Vitis vinifera HOM05D005681 ORTHO05D007274 1.4e-71 273.9 274 52.9
Solyc08g068350.3 Solanum lycopersicum HOM05D005681 ORTHO05D007274 2.4e-71 273.1 286 50.7
SalBow4G0279 Salvia bowleyana HOM05D005681 ORTHO05D007274 3.1e-71 272.7 280 50.7
Nitab4.5_0000052g0240 Nicotiana tabacum HOM05D005681 ORTHO05D007274 4.1e-71 272.3 285 50.9
Cc08_g09110 Coffea canephora HOM05D005681 ORTHO05D007274 6.9e-71 271.6 282 51.4
Sopen08g022200 Solanum pennellii HOM05D005681 ORTHO05D007274 6.9e-71 271.6 290 50.7
CAN.G21.34 Capsicum annuum HOM05D005681 ORTHO05D007274 9.1e-71 271.2 289 49.8
Eucgr.C02898 Eucalyptus grandis HOM05D005681 ORTHO05D007274 1.2e-70 270.8 279 50.9
PGSC0003DMG400010842 Solanum tuberosum HOM05D005681 ORTHO05D007274 1.5e-70 270.4 289 49.8
MBI01_g15703_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 2.0e-70 270.0 277 54.2
Sc23g0005990 Simmondsia chinensis HOM05D005681 ORTHO05D007274 3.4e-70 269.2 278 49.6
Potri.018G038600 Populus trichocarpa HOM05D005681 ORTHO05D007274 4.5e-70 268.9 272 51.1
QL12p029589 Quercus lobata HOM05D005681 ORTHO05D007274 5.9e-70 268.5 272 51.5
SGA_v2.0_scaffold243G44291 Striga asiatica HOM05D005681 ORTHO05D007274 5.9e-70 268.5 289 50.5
COL.COLO4_18685 Corchorus olitorius HOM05D005681 ORTHO05D007274 7.7e-70 268.1 307 47.6
Glyma.06G082600 Glycine max HOM05D005681 ORTHO05D007274 7.7e-70 268.1 272 52.2
Actinidia13315 Actinidia chinensis HOM05D005681 ORTHO05D007274 1.0e-69 267.7 275 51.3
Aqoxy7G01593 Aquilegia oxysepala HOM05D005681 ORTHO05D007274 1.0e-69 267.7 274 51.8
TPR.G1346 Trifolium pratense HOM05D005681 ORTHO05D007274 1.0e-69 267.7 274 51.8
MELO3C011155.2 Cucumis melo HOM05D005681 ORTHO05D007274 1.3e-69 267.3 273 49.8
Nitab4.5_0011506g0010 Nicotiana tabacum HOM05D005681 ORTHO05D007274 2.2e-69 266.5 285 50.2
MSTRG.25900 Avicennia marina HOM05D005681 ORTHO05D007274 5.0e-69 265.4 276 51.4
CSS0012406 Camellia sinensis var. sinensis HOM05D005681 ORTHO05D007274 6.5e-69 265.0 277 49.5
VMungo1309G2636 Vigna mungo HOM05D005681 ORTHO05D007274 6.5e-69 265.0 272 52.6
EL10Ac2g04057 Beta vulgaris HOM05D005681 ORTHO05D007274 8.5e-69 264.6 267 51.3
Ah.10g035130 Amaranthus hybridus HOM05D005681 ORTHO05D007274 1.4e-68 263.8 264 51.9
AT4G32750 Arabidopsis thaliana HOM05D005681 ORTHO05D007274 1.4e-68 263.8 274 51.1
Migut.A00229 Erythranthe guttata HOM05D005681 ORTHO05D007274 1.4e-68 263.8 281 49.1
Prupe.1G451500 Prunus persica HOM05D005681 ORTHO05D007274 1.4e-68 263.8 268 52.6
Sabra18G0039000 Salix brachista HOM05D005681 ORTHO05D007274 1.9e-68 263.5 272 50.4
Hund03415 Selenicereus undatus HOM05D005681 ORTHO05D007274 1.9e-68 263.5 274 50.4
MD15G1096600 Malus domestica HOM05D005681 ORTHO05D007274 2.5e-68 263.1 268 52.6
CARHR240740 Cardamine hirsuta HOM05D005681 ORTHO05D007274 3.2e-68 262.7 274 51.5
Sed0026422 Sechium edule HOM05D005681 ORTHO05D007274 3.2e-68 262.7 276 48.9
Lsat_1_v5_gn_5_33341 Lactuca sativa HOM05D005681 ORTHO05D007274 4.2e-68 262.3 277 49.5
Sabra06G0188600 Salix brachista HOM05D005681 ORTHO05D007274 5.5e-68 261.9 272 50.0
Carub.0007s0774 Capsella rubella HOM05D005681 ORTHO05D007274 7.2e-68 261.5 273 50.9
BcaB03g12761 Brassica carinata HOM05D005681 ORTHO05D007274 9.4e-68 261.2 274 49.3
BolC3t21001H Brassica oleracea HOM05D005681 ORTHO05D007274 4.7e-67 258.8 274 48.5
A08p17930 Brassica napus HOM05D005681 ORTHO05D007274 7.9e-67 258.1 274 48.9
C03p87050 Brassica napus HOM05D005681 ORTHO05D007274 7.9e-67 258.1 274 48.5
BraA08t33745Z Brassica rapa HOM05D005681 ORTHO05D007274 7.9e-67 258.1 274 48.9
FvH4_2g35990 Fragaria vesca HOM05D005681 ORTHO05D007274 1.8e-66 256.9 269 49.8
Thhalv10025880m.g Eutrema salsugineum HOM05D005681 ORTHO05D007274 2.3e-66 256.5 273 49.5
Sp7g30510 Schrenkiella parvula HOM05D005681 ORTHO05D007274 3.0e-66 256.1 274 49.3
Phvul.009G107000 Phaseolus vulgaris HOM05D005681 ORTHO05D007274 5.2e-66 255.4 272 51.5
Haze_21866 Corylus avellana HOM05D005681 ORTHO05D007274 8.8e-66 254.6 349 41.3
MD08G1117000 Malus domestica HOM05D005681 ORTHO05D007274 8.8e-66 254.6 266 51.5
AL7G19000 Arabidopsis lyrata HOM05D005681 ORTHO05D007274 1.1e-65 254.2 274 50.0
ATR0315G043 Amborella trichopoda HOM05D005681 ORTHO05D007274 2.0e-65 253.4 263 51.7
RcHm_v2.0_Chr6g0305881 Rosa chinensis HOM05D005681 ORTHO05D007274 4.4e-65 252.3 271 49.1
Sed0017759 Sechium edule HOM05D005681 ORTHO05D007274 9.7e-65 251.1 273 48.4
FAN20G2636 Fragaria x ananassa HOM05D005681 ORTHO05D007274 1.3e-64 250.8 269 49.4
Aa31LG2G17210 Aethionema arabicum HOM05D005681 ORTHO05D007274 2.8e-64 249.6 262 50.4
Lj7A706G35 Lonicera japonica HOM05D005681 ORTHO05D007274 1.2e-62 244.2 274 49.3
Nn2g11688 Nelumbo nucifera HOM05D005681 ORTHO05D007274 3.5e-62 242.7 240 55.0
CANSAT80G1365 Cannabis sativa HOM05D005681 ORTHO05D007274 5.9e-62 241.9 262 48.5
BcaC09g52069 Brassica carinata HOM05D005681 ORTHO05D007274 6.5e-61 238.4 276 46.4
HPP92_006301 Vanilla planifolia HOM05D005681 ORTHO05D007274 7.2e-60 235.0 278 46.0
HPP92_006306 Vanilla planifolia HOM05D005681 ORTHO05D007274 2.1e-59 233.4 278 46.4
A01p05570 Brassica napus HOM05D005681 ORTHO05D007274 3.0e-58 229.6 274 45.3
FAN15G0799 Fragaria x ananassa HOM05D004668 ORTHO05D006460 2.8e-56 223.0 243 47.3
HanXRQChr08g0236281 Helianthus annuus HOM05D005681 ORTHO05D007274 8.2e-56 221.5 256 44.1
ECA246G0085 Erigeron canadensis HOM05D005681 ORTHO05D007274 1.4e-55 220.7 241 49.0
Os02g0272400 Oryza sativa ssp. japonica HOM05D005681 ORTHO05D007274 1.5e-52 210.7 269 43.9
Cpa.g.sc78.73 Carica papaya HOM05D005681 ORTHO05D007274 2.5e-52 209.9 426 33.1
BolC7t46377H Brassica oleracea HOM05D005681 ORTHO05D007274 9.4e-52 208.0 211 53.1
Dinv30480 Davidia involucrata HOM05D005681 ORTHO05D007274 2.7e-51 206.5 246 48.0
CsaV3_2G031020 Cucumis sativus L. HOM05D005681 ORTHO05D007274 1.4e-50 204.1 188 54.3
Zm00001eb203450 Zea mays HOM05D005681 ORTHO05D007274 4.0e-50 202.6 280 43.6
AUR62043614 Chenopodium quinoa HOM05D005681 ORTHO05D007274 3.1e-47 193.0 263 41.1
Gohir.D06G095800 Gossypium hirsutum HOM05D005681 ORTHO05D007274 1.2e-46 191.0 193 50.3
AagrBONN_evm.TU.Sc2ySwM_362.2150 Anthoceros agrestis HOM05D005681 ORTHO05D007274 2.0e-46 190.3 263 39.2
AUR62029668 Chenopodium quinoa HOM05D005681 ORTHO05D007274 1.0e-45 188.0 263 40.7
Lsat_1_v5_gn_1_49740 Lactuca sativa HOM05D005681 ORTHO05D007274 6.5e-45 185.3 264 40.2
Duzib168G1957 Durio zibethinus HOM05D005681 ORTHO05D007274 2.5e-44 183.3 262 40.1
DCAR_000748 Daucus carota HOM05D005681 ORTHO05D007274 3.2e-44 183.0 155 59.4
Oeu008286.1 Olea europaea HOM05D005681 ORTHO05D007274 6.1e-43 178.7 158 57.6
BcaNung03601 Brassica carinata HOM05D005681 ORTHO05D007274 2.0e-41 173.7 201 47.3
Pp3c7_12500 Physcomitrium patens HOM05D005681 ORTHO05D007274 4.4e-41 172.6 288 36.1
Mapoly0093s0011 Marchantia polymorpha HOM05D005681 ORTHO05D007274 5.7e-41 172.2 267 37.5
Oeu008289.1 Olea europaea HOM05D005681 ORTHO05D007274 5.7e-41 172.2 158 57.0
SMO347G0207 Selaginella moellendorffii HOM05D005681 ORTHO05D007274 1.7e-37 160.6 268 38.4
Pp3c2_21260 Physcomitrium patens HOM05D005681 ORTHO05D007274 7.3e-36 155.2 263 36.9
BcaNung04523 Brassica carinata HOM05D005681 ORTHO05D007274 9.5e-36 154.8 213 43.2
BraA01t00528Z Brassica rapa HOM05D005681 ORTHO05D007274 2.1e-35 153.7 156 51.9
C07p59310 Brassica napus HOM05D005681 ORTHO05D007274 3.7e-32 142.9 263 39.5
AUR62043618 Chenopodium quinoa HOM05D005681 ORTHO05D007274 8.0e-27 125.2 116 56.0
MBI01_g30752_MAGBIO Magnolia biondii HOM05D005681 ORTHO05D007274 7.8e-22 108.6 179 40.8
Oeu012191.1 Olea europaea HOM05D005681 ORTHO05D007274 1.1e-18 98.2 122 44.3
Oeu031829.2 Olea europaea HOM05D005681 ORTHO05D007274 8.9e-10 68.6 115 34.8
A03p61560 Brassica napus HOM05D005681 ORTHO05D040333 4.1e-07 59.7 242 27.3


User provided reference genes

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