Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 3.8e-312 1074.7 549 100.0
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 2.0e-215 752.7 497 78.5
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 4.4e-53 213.4 526 35.2
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 2.1e-47 194.5 642 29.6
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 2.1e-47 194.5 505 32.9
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 2.4e-43 181.0 462 35.5
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 1.6e-42 178.3 572 31.3
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 6.0e-42 176.4 473 33.6
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 1.3e-41 175.3 583 30.0
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 2.3e-41 174.5 453 34.9
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 1.1e-40 172.2 436 34.6
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 1.9e-40 171.4 472 32.0
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 1.9e-40 171.4 478 33.5
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 2.5e-40 171.0 462 33.1
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 5.6e-40 169.9 483 31.1
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 5.6e-40 169.9 492 31.9
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 3.6e-39 167.2 479 31.9
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 4.7e-39 166.8 501 33.3
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 6.2e-39 166.4 474 34.2
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 8.1e-39 166.0 456 31.1
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 1.4e-38 165.2 469 32.6
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 8.9e-38 162.5 524 31.5
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 8.9e-38 162.5 501 32.9
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 1.5e-37 161.8 493 32.0
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 2.0e-37 161.4 473 31.9
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 2.6e-37 161.0 479 32.2
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 4.4e-37 160.2 462 30.7
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 9.9e-37 159.1 457 31.3
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 9.9e-37 159.1 460 31.7
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 9.9e-37 159.1 460 31.7
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 2.9e-36 157.5 450 31.8
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 2.9e-36 157.5 465 30.8
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 3.8e-36 157.1 473 31.3
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 8.4e-36 156.0 454 31.3
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 8.4e-36 156.0 458 32.1
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 1.9e-35 154.8 498 30.7
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 5.4e-35 153.3 466 32.8
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 2.7e-34 151.0 465 30.1
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 6.0e-34 149.8 487 30.0
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 1.3e-33 148.7 463 30.9
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 3.0e-33 147.5 481 31.4
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 1.9e-32 144.8 455 32.5
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 3.3e-32 144.1 457 29.3
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 5.6e-32 143.3 455 32.7
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 7.3e-32 142.9 524 29.6
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 3.6e-31 140.6 499 29.9
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 8.1e-31 139.4 483 29.4
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.4e-30 138.7 453 30.2
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 1.8e-30 138.3 487 30.0
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 2.4e-30 137.9 508 29.1
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 3.1e-30 137.5 511 29.5
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 2.0e-29 134.8 514 27.2
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 2.0e-29 134.8 501 28.7
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 2.0e-29 134.8 522 28.2
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 5.8e-29 133.3 481 31.4
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 2.2e-28 131.3 564 27.5
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 3.8e-28 130.6 454 30.2
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 4.9e-28 130.2 509 29.9
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 8.4e-28 129.4 464 30.8
Os11g0247500 Oryza sativa ssp. japonica HOM05D019859 ORTHO05D008940 1.9e-27 128.3 458 30.3
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 1.9e-27 128.3 470 29.4
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 2.4e-27 127.9 477 29.6
Zm00001eb434100 Zea mays HOM05D019859 ORTHO05D008940 2.4e-27 127.9 469 30.1
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 7.1e-27 126.3 493 30.2
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 9.3e-27 125.9 447 30.2
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 9.3e-27 125.9 440 28.9
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 3.5e-26 124.0 508 27.8
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 3.9e-25 120.6 445 29.7
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 3.9e-25 120.6 500 26.0
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 1.5e-24 118.6 470 30.0
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 3.3e-24 117.5 426 31.0
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 3.3e-24 117.5 458 27.7
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 4.3e-24 117.1 564 27.5
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 5.6e-24 116.7 487 29.2
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.6e-23 115.2 432 31.7
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 2.1e-23 114.8 565 28.1
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 9.0e-22 109.4 454 30.4
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 1.2e-21 109.0 481 28.3
Zm00001eb136730 Zea mays HOM05D019859 ORTHO05D008940 1.2e-21 109.0 399 29.3
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 2.6e-21 107.8 496 27.4
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 5.8e-21 106.7 416 29.1
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 8.4e-20 102.8 476 27.9
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 3.2e-19 100.9 302 31.8
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 4.2e-19 100.5 460 27.2
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 1.3e-17 95.5 488 27.3
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 6.7e-17 93.2 544 25.0
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 6.7e-17 93.2 382 28.3
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 8.7e-17 92.8 467 26.1
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 8.7e-17 92.8 492 25.6
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 1.9e-16 91.7 449 27.8
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 5.6e-16 90.1 481 25.8
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 2.8e-15 87.8 497 26.4
SGA_v2.0_scaffold25G11016 Striga asiatica HOM05D007315 ORTHO05D008940 6.2e-15 86.7 466 24.7
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 1.4e-14 85.5 365 28.5
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 4.0e-14 84.0 216 33.3
ATR0743G232 Amborella trichopoda HOM05D007315 ORTHO05D008940 5.3e-14 83.6 149 41.6
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 1.2e-13 82.4 448 27.2
SGA_v2.0_scaffold19G08894 Striga asiatica HOM05D007315 ORTHO05D008940 2.0e-13 81.6 430 26.3
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 7.6e-13 79.7 297 30.3
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 7.6e-13 79.7 263 32.3
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 3.8e-12 77.4 296 28.0
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 3.8e-12 77.4 296 28.0
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 1.9e-11 75.1 300 29.3
SEGI_20190 Sequoiadendron giganteum HOM05D007315 ORTHO05D008940 4.3e-08 63.9 568 22.7
unitig_578.g16246 Utricularia gibba HOM05D007315 ORTHO05D008940 4.3e-08 63.9 169 32.0
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 1.3e-07 62.4 256 27.3


User provided reference genes

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