Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 0.0e+00 1518.4 820 100.0
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 0.0e+00 1272.3 823 87.4
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 7.9e-139 498.8 907 42.2
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 3.9e-138 496.5 907 41.2
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 7.6e-134 482.3 901 41.0
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.1e-132 478.4 901 40.7
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 3.9e-130 469.9 902 40.0
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 1.1e-129 468.4 909 40.4
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 1.2e-126 458.4 909 38.6
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 4.9e-125 453.0 773 42.4
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 3.2e-124 450.3 909 37.6
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 4.2e-124 449.9 897 37.5
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 7.1e-124 449.1 910 40.1
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.6e-123 448.0 897 37.2
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 2.7e-123 447.2 900 38.4
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 6.0e-123 446.0 787 42.4
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 7.9e-123 445.7 897 38.0
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 9.7e-121 438.7 765 41.3
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 1.8e-119 434.5 913 36.9
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 5.3e-119 433.0 906 36.8
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 2.0e-118 431.0 924 36.5
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 1.7e-117 427.9 916 36.4
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 5.0e-117 426.4 910 35.8
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 8.5e-117 425.6 770 39.9
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 3.2e-116 423.7 902 38.1
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 2.1e-115 421.0 800 38.6
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.0e-114 418.7 730 42.7
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 1.0e-114 418.7 894 37.1
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 3.0e-114 417.2 891 38.0
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 3.9e-114 416.8 791 39.3
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 5.1e-114 416.4 906 38.6
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 6.7e-114 416.0 923 38.8
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 2.0e-113 414.5 782 39.9
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 4.3e-113 413.3 752 40.0
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 9.7e-113 412.1 924 38.9
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 1.3e-112 411.8 887 38.1
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 1.3e-112 411.8 888 34.9
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 2.2e-112 411.0 790 38.6
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 2.8e-112 410.6 755 40.0
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 8.2e-112 409.1 917 37.3
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 1.8e-111 407.9 789 38.5
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 1.8e-111 407.9 789 38.5
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 4.1e-111 406.8 898 37.4
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 4.1e-111 406.8 774 39.7
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 6.9e-111 406.0 766 41.3
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 6.9e-111 406.0 761 41.0
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 1.2e-110 405.2 905 37.6
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 1.2e-110 405.2 776 38.0
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 1.5e-110 404.8 764 38.6
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 2.0e-110 404.4 772 42.2
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 4.5e-110 403.3 917 37.7
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.0e-109 402.1 883 37.6
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 2.9e-109 400.6 883 37.6
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 6.5e-109 399.4 765 40.4
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 6.5e-109 399.4 891 37.4
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 8.5e-109 399.1 898 36.7
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 1.4e-108 398.3 901 36.2
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 3.2e-108 397.1 759 39.3
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 7.2e-108 396.0 883 37.4
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 2.7e-107 394.0 822 38.2
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 3.6e-107 393.7 759 39.1
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 3.9e-106 390.2 896 36.4
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 5.1e-106 389.8 750 41.1
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 6.7e-106 389.4 767 39.9
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.5e-105 388.3 766 39.0
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 2.0e-105 387.9 743 39.3
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 2.0e-105 387.9 905 35.8
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 2.6e-105 387.5 847 37.4
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 3.3e-105 387.1 746 39.1
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 3.3e-105 387.1 763 40.1
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 9.7e-105 385.6 740 40.9
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 9.7e-105 385.6 838 38.4
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 3.7e-104 383.6 775 38.8
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 4.8e-104 383.3 787 39.6
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 6.3e-104 382.9 894 35.8
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 8.2e-104 382.5 927 36.4
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 8.2e-104 382.5 889 37.2
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 1.1e-103 382.1 904 36.8
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 1.1e-103 382.1 848 38.6
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 1.1e-103 382.1 846 36.8
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 1.8e-103 381.3 787 39.5
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 2.4e-103 380.9 907 37.0
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 2.4e-103 380.9 746 39.8
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 4.1e-103 380.2 910 36.5
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 4.1e-103 380.2 773 39.1
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 7.0e-103 379.4 906 36.5
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 9.1e-103 379.0 905 36.4
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 1.5e-102 378.3 740 38.6
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 4.5e-102 376.7 898 36.2
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 5.0e-101 373.2 761 39.0
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 1.9e-100 371.3 789 38.9
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 4.2e-100 370.2 865 36.4
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 4.2e-100 370.2 782 38.5
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 7.2e-100 369.4 701 40.9
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 9.4e-100 369.0 760 38.7
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 6.1e-99 366.3 741 38.1
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 6.7e-98 362.8 738 36.7
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 6.7e-98 362.8 776 39.0
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 1.1e-97 362.1 792 37.1
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 2.0e-97 361.3 753 38.6
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 2.0e-97 361.3 713 40.5
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 9.7e-97 359.0 794 37.8
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 1.3e-96 358.6 887 35.9
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 3.7e-96 357.1 749 36.3
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 4.8e-96 356.7 796 36.6
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 1.1e-95 355.5 884 35.9
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 1.8e-95 354.8 796 36.8
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 2.4e-95 354.4 715 40.8
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 7.0e-95 352.8 796 36.7
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 4.5e-94 350.1 839 37.7
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 1.7e-93 348.2 765 36.2
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 1.1e-92 345.5 811 35.5
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 1.1e-92 345.5 842 37.1
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 1.5e-92 345.1 888 35.7
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 1.9e-92 344.7 765 35.6
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 2.5e-92 344.4 724 35.9
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 4.2e-92 343.6 897 36.6
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.1e-91 341.3 779 35.9
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 4.7e-91 340.1 682 40.3
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 6.1e-91 339.7 841 36.5
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 6.1e-91 339.7 755 38.0
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 1.0e-90 339.0 773 37.0
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 6.7e-90 336.3 756 39.7
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.0e-89 334.7 785 36.4
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 3.3e-89 334.0 901 33.4
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 3.3e-89 334.0 693 37.5
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 4.4e-89 333.6 725 34.9
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 5.7e-89 333.2 735 35.8
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 1.7e-88 331.6 739 38.0
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 1.0e-85 322.4 730 38.8
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 1.0e-85 322.4 722 38.6
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 1.3e-85 322.0 741 34.0
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 1.9e-84 318.2 898 34.6
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 3.2e-84 317.4 898 34.6
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 2.1e-83 314.7 716 40.4
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 1.4e-82 312.0 713 37.3
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 1.4e-82 312.0 716 37.2
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 6.8e-82 309.7 722 34.1
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 1.2e-81 308.9 825 36.6
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 1.7e-80 305.1 699 38.3
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 3.1e-79 300.8 696 38.6
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 1.0e-77 295.8 435 46.9
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 1.3e-77 295.4 897 31.8
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 1.7e-77 295.0 692 39.9
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 2.3e-77 294.7 820 34.3
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 6.6e-77 293.1 773 36.1
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 1.1e-76 292.4 702 37.6
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 1.0e-74 285.8 686 37.3
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 5.2e-74 283.5 718 40.4
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 8.9e-74 282.7 711 40.4
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 5.7e-73 280.0 710 36.9
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 3.9e-69 267.3 735 35.5
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 1.9e-68 265.0 746 36.3
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 2.9e-64 251.1 244 53.7
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 8.9e-58 229.6 735 32.8
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 4.6e-54 217.2 254 48.8
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 7.8e-54 216.5 821 30.9
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 8.6e-53 213.0 701 28.2
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 3.3e-52 211.1 823 28.7
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 4.3e-52 210.7 223 51.6
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 4.0e-50 204.1 198 52.5
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 8.9e-50 203.0 270 43.7
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 1.3e-48 199.1 135 68.9
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 6.4e-48 196.8 723 32.6
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 9.2e-47 193.0 484 33.9
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 4.3e-44 184.1 135 60.7
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.1e-42 179.5 254 42.5
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 5.8e-41 173.7 205 46.3
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 1.3e-40 172.6 162 56.8
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 1.3e-37 162.5 673 31.2
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 3.0e-37 161.4 876 28.8
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 5.1e-37 160.6 97 81.4
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 2.1e-35 155.2 189 45.0
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 2.8e-35 154.8 404 32.9
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 1.8e-26 125.6 676 27.4
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 1.6e-22 112.5 104 56.7
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 6.7e-21 107.1 59 84.7
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 5.8e-17 94.0 237 32.5
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 1.0e-16 93.2 366 30.3
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 4.8e-11 74.3 255 23.9
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 6.5e-08 63.9 221 27.6


User provided reference genes

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