Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0374 Ceratophyllum demersum HOM05D006392 ORTHO05D008010 5.6e-231 803.9 399 100.0
TAR628G0005 Trochodendron aralioides HOM05D006392 ORTHO05D008010 4.5e-132 475.3 377 62.6
GSVIVG01009916001 Vitis vinifera HOM05D006392 ORTHO05D008010 2.0e-127 459.9 377 60.5
MSTRG.1188 Avicennia marina HOM05D006392 ORTHO05D008010 1.1e-125 454.1 374 58.8
CSS0006206 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 4.5e-124 448.7 376 57.2
CSS0012189 Camellia sinensis var. sinensis HOM05D006392 ORTHO05D008010 4.5e-124 448.7 376 57.2
Hma1.2p1_0638F.1_g193900 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 4.5e-124 448.7 373 58.4
PGSC0003DMG400009939 Solanum tuberosum HOM05D006392 ORTHO05D008010 7.7e-124 448.0 376 57.2
Solyc04g081500.3 Solanum lycopersicum HOM05D006392 ORTHO05D008010 1.7e-123 446.8 376 56.9
Sopen04g035110 Solanum pennellii HOM05D006392 ORTHO05D008010 2.9e-123 446.0 376 56.9
CAN.G311.35 Capsicum annuum HOM05D006392 ORTHO05D008010 8.6e-123 444.5 373 56.8
Aqoxy6G00284_Aqoxy6G00285 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.9e-122 443.4 368 60.9
Oeu014179.1 Olea europaea HOM05D006392 ORTHO05D008010 3.3e-122 442.6 389 56.6
PSO675G2043 Papaver somniferum HOM05D006392 ORTHO05D008010 3.6e-121 439.1 372 59.7
Rhsim06G0021200 Rhododendron simsii HOM05D006392 ORTHO05D008010 4.7e-121 438.7 373 56.8
ATR0810G120 Amborella trichopoda HOM05D006392 ORTHO05D008010 1.0e-120 437.6 370 57.3
PSO541G2958 Papaver somniferum HOM05D006392 ORTHO05D008010 5.2e-120 435.3 372 58.9
Nitab4.5_0013390g0010 Nicotiana tabacum HOM05D006392 ORTHO05D008010 4.4e-119 432.2 344 59.3
SalBow7G2189 Salvia bowleyana HOM05D006392 ORTHO05D008010 4.4e-119 432.2 389 55.3
Migut.C00843 Erythranthe guttata HOM05D006392 ORTHO05D008010 5.4e-117 425.2 375 54.7
Eucgr.F01664 Eucalyptus grandis HOM05D006392 ORTHO05D008010 7.0e-117 424.9 379 56.2
Thecc.08G045200 Theobroma cacao HOM05D006392 ORTHO05D008010 9.2e-117 424.5 377 55.4
Actinidia21265 Actinidia chinensis HOM05D006392 ORTHO05D008010 1.6e-116 423.7 376 55.3
Lj4C23T1 Lonicera japonica HOM05D006392 ORTHO05D008010 3.5e-116 422.5 395 51.4
CiPaw.07G149200 Carya illinoinensis HOM05D006392 ORTHO05D008010 1.3e-115 420.6 374 55.3
HPP92_024091 Vanilla planifolia HOM05D006392 ORTHO05D008010 1.7e-115 420.2 344 60.5
TWI56G0581 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 2.9e-115 419.5 379 54.9
Gohir.A01G111000 Gossypium hirsutum HOM05D006392 ORTHO05D008010 1.1e-114 417.5 375 54.7
Cpa.g.sc26.51 Carica papaya HOM05D006392 ORTHO05D008010 1.5e-114 417.2 378 55.0
HanXRQChr13g0387101 Helianthus annuus HOM05D006392 ORTHO05D008010 3.3e-114 416.0 378 55.0
CsaV3_3G045910 Cucumis sativus L. HOM05D006392 ORTHO05D008010 7.3e-114 414.8 379 53.0
DCAR_023015 Daucus carota HOM05D006392 ORTHO05D008010 7.3e-114 414.8 373 54.2
Duzib093G0848 Durio zibethinus HOM05D006392 ORTHO05D008010 7.3e-114 414.8 377 54.4
ECA233G3412 Erigeron canadensis HOM05D006392 ORTHO05D008010 7.3e-114 414.8 376 54.5
Gorai.002G123300 Gossypium raimondii HOM05D006392 ORTHO05D008010 9.5e-114 414.5 375 54.4
SGA_v2.0_scaffold11G05922 Striga asiatica HOM05D006392 ORTHO05D008010 1.6e-113 413.7 347 58.2
Gohir.D01G097700 Gossypium hirsutum HOM05D006392 ORTHO05D008010 2.1e-113 413.3 375 54.4
Ciclev10001496m.g Citrus clementina HOM05D006392 ORTHO05D008010 2.8e-113 412.9 377 53.3
Haze_22639 Corylus avellana HOM05D006392 ORTHO05D008010 3.1e-112 409.5 421 50.8
Os06g0715600 Oryza sativa ssp. japonica HOM05D006392 ORTHO05D008010 5.2e-112 408.7 366 53.6
Potri.005G240000 Populus trichocarpa HOM05D006392 ORTHO05D008010 5.2e-112 408.7 375 52.5
QL02p011683 Quercus lobata HOM05D006392 ORTHO05D008010 8.9e-112 407.9 379 53.8
Potri.002G021700 Populus trichocarpa HOM05D006392 ORTHO05D008010 2.6e-111 406.4 375 52.5
Sabra05G0185500 Salix brachista HOM05D006392 ORTHO05D008010 2.6e-111 406.4 375 52.8
Sed0018359 Sechium edule HOM05D006392 ORTHO05D008010 3.4e-111 406.0 374 53.2
PGR083G2660 Punica granatum HOM05D006392 ORTHO05D008010 1.3e-110 404.1 380 52.4
Prupe.1G364700 Prunus persica HOM05D006392 ORTHO05D008010 1.7e-110 403.7 376 53.2
Duzib116G0836 Durio zibethinus HOM05D006392 ORTHO05D008010 2.9e-110 402.9 346 57.2
MD15G1011700 Malus domestica HOM05D006392 ORTHO05D008010 2.4e-109 399.8 376 51.9
SEGI_16132 Sequoiadendron giganteum HOM05D006392 ORTHO05D008010 7.0e-109 398.3 374 54.0
CANSAT25G2040 Cannabis sativa HOM05D006392 ORTHO05D008010 1.2e-108 397.5 379 52.2
Cfa013957 Carpinus fangiana HOM05D006392 ORTHO05D008010 1.2e-108 397.5 360 56.1
MD08G1012700 Malus domestica HOM05D006392 ORTHO05D008010 2.7e-108 396.4 376 52.1
Sabra02G0018100 Salix brachista HOM05D006392 ORTHO05D008010 2.7e-108 396.4 407 49.4
AUR62033899 Chenopodium quinoa HOM05D006392 ORTHO05D008010 3.5e-108 396.0 375 52.3
Lj6g0002207 Lotus japonicus HOM05D006392 ORTHO05D008010 7.8e-108 394.8 375 53.1
Manes.05G146900 Manihot esculenta HOM05D006392 ORTHO05D008010 1.3e-107 394.0 375 52.3
A06p48320 Brassica napus HOM05D006392 ORTHO05D008010 3.9e-107 392.5 378 52.9
Lalb_Chr20g0119891 Lupinus albus HOM05D006392 ORTHO05D008010 6.6e-107 391.7 372 53.0
MBI05_g07507_MAGBIO Magnolia biondii HOM05D006392 ORTHO05D008010 6.6e-107 391.7 344 57.3
Medtr2g029040 Medicago truncatula HOM05D006392 ORTHO05D008010 6.6e-107 391.7 371 52.6
Phvul.005G022200 Phaseolus vulgaris HOM05D006392 ORTHO05D008010 6.6e-107 391.7 368 54.6
AUR62041903 Chenopodium quinoa HOM05D006392 ORTHO05D008010 8.6e-107 391.3 343 56.0
AL8G18870 Arabidopsis lyrata HOM05D006392 ORTHO05D008010 1.5e-106 390.6 379 51.2
BraA06t27702Z Brassica rapa HOM05D006392 ORTHO05D008010 1.5e-106 390.6 378 52.6
Lsat_1_v5_gn_8_30701 Lactuca sativa HOM05D006392 ORTHO05D008010 1.5e-106 390.6 378 53.4
Sp7g07860 Schrenkiella parvula HOM05D006392 ORTHO05D008010 1.9e-106 390.2 380 52.1
BcaC02g10765 Brassica carinata HOM05D006392 ORTHO05D008010 2.5e-106 389.8 378 52.6
RcHm_v2.0_Chr6g0302911 Rosa chinensis HOM05D006392 ORTHO05D008010 2.5e-106 389.8 374 52.4
THA.LOC104809190 Tarenaya hassleriana HOM05D006392 ORTHO05D008010 5.6e-106 388.7 376 53.5
Glyma.09G103100 Glycine max HOM05D006392 ORTHO05D008010 9.5e-106 387.9 370 53.0
BcaC06g31757 Brassica carinata HOM05D006392 ORTHO05D008010 1.6e-105 387.1 378 52.1
Zm00001eb228060 Zea mays HOM05D006392 ORTHO05D008010 2.8e-105 386.3 371 51.5
EL10Ac1g02188 Beta vulgaris HOM05D006392 ORTHO05D008010 6.2e-105 385.2 356 52.8
C04p25370 Brassica napus HOM05D006392 ORTHO05D008010 6.2e-105 385.2 379 52.5
BolC4t24044H Brassica oleracea HOM05D006392 ORTHO05D008010 6.2e-105 385.2 379 52.5
Thhalv10003229m.g Eutrema salsugineum HOM05D006392 ORTHO05D008010 6.2e-105 385.2 376 51.6
Carub.0008s0658 Capsella rubella HOM05D006392 ORTHO05D008010 1.4e-104 384.0 382 50.8
arahy.Tifrunner.gnm1.ann1.8AJY4P Arachis hypogaea HOM05D006392 ORTHO05D008010 1.8e-104 383.6 363 54.0
Nn1g05904 Nelumbo nucifera HOM05D006392 ORTHO05D008010 4.0e-104 382.5 379 52.8
VMungo1080G0965 Vigna mungo HOM05D006392 ORTHO05D008010 4.0e-104 382.5 349 55.3
Ca_00791_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 8.9e-104 381.3 368 51.6
Hund05186 Selenicereus undatus HOM05D006392 ORTHO05D008010 8.9e-104 381.3 342 53.5
TWI36G0533 Tripterygium wilfordii HOM05D006392 ORTHO05D008010 8.9e-104 381.3 357 52.9
arahy.Tifrunner.gnm1.ann1.GAE5DS Arachis hypogaea HOM05D006392 ORTHO05D008010 1.5e-103 380.6 363 53.4
FvH4_2g38390 Fragaria vesca HOM05D006392 ORTHO05D008010 2.6e-103 379.8 374 51.1
AT5G42470 Arabidopsis thaliana HOM05D006392 ORTHO05D008010 5.8e-103 378.6 381 50.7
Ca_07152_v3 Cicer arietinum L. HOM05D006392 ORTHO05D008010 3.7e-102 375.9 380 50.3
Peaxi162Scf00438g00835 Petunia axillaris HOM05D006392 ORTHO05D008010 7.8e-100 368.2 376 51.1
Aa31LG9G12590 Aethionema arabicum HOM05D006392 ORTHO05D008010 1.8e-96 357.1 354 50.0
FAN20G2474 Fragaria x ananassa HOM05D006392 ORTHO05D008010 1.6e-92 344.0 374 47.9
FAN15G0959 Fragaria x ananassa HOM05D006392 ORTHO05D008010 2.7e-92 343.2 374 47.6
Sc02g0008600 Simmondsia chinensis HOM05D006392 ORTHO05D008010 2.3e-91 340.1 326 53.1
FAN27G1073 Fragaria x ananassa HOM05D006392 ORTHO05D008010 5.1e-91 339.0 374 47.6
Hma1.2p1_0638F.1_g193910 Hydrangea macrophylla HOM05D006392 ORTHO05D008010 2.5e-90 336.7 396 45.7
Dinv31849 Davidia involucrata HOM05D006392 ORTHO05D008010 5.6e-90 335.5 308 55.2
Actinidia35835 Actinidia chinensis HOM05D006392 ORTHO05D008010 6.8e-88 328.6 345 49.9
Psat1g169520 Pisum sativum HOM05D006392 ORTHO05D008010 8.9e-88 328.2 321 52.6
MELO3C030484.2 Cucumis melo HOM05D006392 ORTHO05D008010 1.7e-86 323.9 364 47.5
Eucgr.F02661 Eucalyptus grandis HOM05D006392 ORTHO05D008010 2.1e-84 317.0 308 53.2
MD11G1014100 Malus domestica HOM05D006392 ORTHO05D008010 1.1e-80 304.7 278 53.6
Mapoly0064s0103 Marchantia polymorpha HOM05D006392 ORTHO05D008010 6.9e-80 302.0 375 41.1
SMO196G0156 Selaginella moellendorffii HOM05D006392 ORTHO05D008010 2.9e-78 296.6 373 42.4
AagrBONN_evm.TU.Sc2ySwM_117.3435 Anthoceros agrestis HOM05D006392 ORTHO05D008010 2.4e-77 293.5 358 43.3
unitig_32.g11136 Utricularia gibba HOM05D006392 ORTHO05D008010 9.3e-77 291.6 308 48.1
Pp3c4_9730 Physcomitrium patens HOM05D006392 ORTHO05D008010 1.2e-76 291.2 372 42.7
COL.COLO4_26140 Corchorus olitorius HOM05D006392 ORTHO05D008010 6.0e-76 288.9 288 50.7
vmacro07583 Vaccinium macrocarpon HOM05D006392 ORTHO05D008010 1.9e-74 283.9 305 48.5
TPR.G17497 Trifolium pratense HOM05D006392 ORTHO05D008010 3.3e-74 283.1 256 55.9
Actinidia16990 Actinidia chinensis HOM05D006392 ORTHO05D004187 4.2e-69 266.2 260 50.8
Atru.chr13.285 Acer truncatum HOM05D006392 ORTHO05D008010 4.6e-68 262.7 307 46.6
CARHR181930 Cardamine hirsuta HOM05D006392 ORTHO05D008010 4.8e-65 252.7 196 60.7
Glyma.15G275100 Glycine max HOM05D006392 ORTHO05D008010 1.8e-64 250.8 191 61.3
Cc10_g01630 Coffea canephora HOM05D006392 ORTHO05D008010 2.5e-61 240.4 183 58.5
CBR_g23034 Chara braunii HOM05D006392 ORTHO05D008010 5.7e-58 229.2 390 31.3
Cc10_g01620 Coffea canephora HOM05D006392 ORTHO05D008010 7.4e-42 175.6 147 57.8
Aqoxy4G01015 Aquilegia oxysepala HOM05D006392 ORTHO05D008010 1.4e-40 171.4 153 57.5
Ah.11g039750 Amaranthus hybridus HOM05D006392 ORTHO05D008010 1.8e-40 171.0 147 55.1
RcHm_v2.0_Chr4g0398171 Rosa chinensis HOM05D006392 ORTHO05D008010 8.0e-28 129.0 107 55.1
RcHm_v2.0_Chr4g0398161 Rosa chinensis HOM05D006392 ORTHO05D008010 2.8e-25 120.6 85 68.2
TPR.G29580 Trifolium pratense HOM05D006392 ORTHO05D008010 5.9e-23 112.8 114 50.0
Actinidia27159 Actinidia chinensis HOM05D006392 ORTHO05D008010 6.3e-17 92.8 177 33.9
Cre09.g401367 Chlamydomonas reinhardtii HOM05D006392 ORTHO05D008010 4.0e-11 73.6 139 33.1
ClCG05G018230 Citrullus lanatus HOM05D006392 ORTHO05D008010 2.6e-10 70.9 44 63.6


User provided reference genes

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