Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0350 Ceratophyllum demersum HOM05D006627 ORTHO05D007753 0.0e+00 2268.0 1145 100.0
CDE07G1237 Ceratophyllum demersum HOM05D006627 ORTHO05D007753 0.0e+00 1178.3 754 82.5
CDE07G1099 Ceratophyllum demersum HOM05D006627 ORTHO05D007753 5.8e-132 476.5 288 85.8
MBI04_g35056_MAGBIO Magnolia biondii HOM05D006627 ORTHO05D007753 6.8e-64 250.4 1351 26.9
TAR375G0196 Trochodendron aralioides HOM05D006627 ORTHO05D007753 2.9e-54 218.4 1314 26.9
TAR629G2332 Trochodendron aralioides HOM05D006627 ORTHO05D007753 2.1e-49 202.2 1351 25.3
PSO478G1013 Papaver somniferum HOM05D006627 ORTHO05D007753 3.7e-46 191.4 1116 27.0
PSO782G1175 Papaver somniferum HOM05D006627 ORTHO05D007753 1.9e-42 179.1 1119 26.7
TAR374G1318 Trochodendron aralioides HOM05D006627 ORTHO05D007753 8.1e-41 173.7 1242 26.6
Nn1g01607 Nelumbo nucifera HOM05D006627 ORTHO05D007753 6.8e-40 170.6 1357 25.0
Nn1g01606 Nelumbo nucifera HOM05D006627 ORTHO05D007753 2.2e-38 165.6 1290 25.0
GSVIVG01019397001 Vitis vinifera HOM05D006627 ORTHO05D007753 1.8e-32 146.0 1241 25.3
QL12p032277 Quercus lobata HOM05D006627 ORTHO05D007753 3.8e-30 138.3 822 25.8
Cfa012198 Carpinus fangiana HOM05D006627 ORTHO05D007753 1.0e-27 130.2 411 31.1
GSVIVG01028875001 Vitis vinifera HOM05D006627 ORTHO05D007753 2.8e-25 122.1 724 26.0
Dinv35242 Davidia involucrata HOM05D006627 ORTHO05D007753 1.8e-24 119.4 407 31.2
Actinidia34148 Actinidia chinensis HOM05D001410 ORTHO05D007753 1.5e-23 116.3 1069 25.1
Haze_08819 Corylus avellana HOM05D006627 ORTHO05D007753 2.0e-23 115.9 1277 23.1
Manes.02G019000 Manihot esculenta HOM05D006627 ORTHO05D007753 7.6e-23 114.0 1066 25.3
Os08g0430000 Oryza sativa ssp. japonica HOM05D006627 ORTHO05D007753 4.2e-21 108.2 1300 24.1
Duzib205G1471 Durio zibethinus HOM05D006627 ORTHO05D007753 7.9e-20 104.0 1115 24.5
Atru.chr1.386 Acer truncatum HOM05D006627 ORTHO05D007753 5.1e-19 101.3 717 24.4
Cpa.g.sc107.97 Carica papaya HOM05D006627 ORTHO05D007753 1.5e-18 99.8 293 33.4
Haze_00034 Corylus avellana HOM05D006627 ORTHO05D007753 2.5e-18 99.0 338 30.5
Dinv38916 Davidia involucrata HOM05D006627 ORTHO05D007753 4.3e-18 98.2 1267 23.8
Rhsim03G0190100 Rhododendron simsii HOM05D006627 ORTHO05D007753 7.4e-18 97.4 861 23.5
Actinidia03134 Actinidia chinensis HOM05D006627 ORTHO05D007753 2.8e-17 95.5 1064 23.2
ATR0661G323 Amborella trichopoda HOM05D006627 ORTHO05D007753 5.3e-16 91.3 402 30.3
Oeu060456.3 Olea europaea HOM05D006627 ORTHO05D007753 5.3e-16 91.3 783 24.6
Actinidia28362 Actinidia chinensis HOM05D006627 ORTHO05D007753 9.0e-16 90.5 1189 23.5
Peaxi162Scf00444g00008 Petunia axillaris HOM05D006627 ORTHO05D007753 1.2e-15 90.1 709 24.8
Actinidia31835 Actinidia chinensis HOM05D006627 ORTHO05D007753 1.5e-15 89.7 652 24.7
HPP92_025630 Vanilla planifolia HOM05D006627 ORTHO05D007753 1.5e-15 89.7 1214 23.9
Atru.chr1.369 Acer truncatum HOM05D006627 ORTHO05D007753 4.5e-15 88.2 685 23.5
Atru.ctg97_1.2 Acer truncatum HOM05D006627 ORTHO05D007753 4.5e-15 88.2 685 23.5
HanXRQChr13g0394821 Helianthus annuus HOM05D006627 ORTHO05D007753 4.5e-15 88.2 693 26.6
MD07G1277900 Malus domestica HOM05D006627 ORTHO05D007753 4.5e-15 88.2 712 24.4
CSS0035854 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 7.6e-15 87.4 1070 23.9
CSS0044230 Camellia sinensis var. sinensis HOM05D006627 ORTHO05D007753 7.6e-15 87.4 1070 23.9
Lsat_1_v5_gn_6_5180 Lactuca sativa HOM05D006627 ORTHO05D007753 7.6e-15 87.4 381 29.9
Prupe.2G299600 Prunus persica HOM05D006627 ORTHO05D007753 7.6e-15 87.4 1089 23.4
Dinv28394 Davidia involucrata HOM05D006627 ORTHO05D007753 1.7e-14 86.3 1142 23.6
Actinidia14583 Actinidia chinensis HOM05D006627 ORTHO05D007753 4.9e-14 84.7 344 28.5
EL10Ac5g12810 Beta vulgaris HOM05D006627 ORTHO05D007753 4.9e-14 84.7 1056 24.0
AUR62027266 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.1e-13 83.6 1101 23.9
Gohir.D10G247200 Gossypium hirsutum HOM05D006627 ORTHO05D007753 1.1e-13 83.6 319 29.2
Gorai.011G285600 Gossypium raimondii HOM05D006627 ORTHO05D007753 1.1e-13 83.6 319 29.2
FAN03G1328 Fragaria x ananassa HOM05D006627 ORTHO05D007753 1.9e-13 82.8 708 25.0
Gohir.A10G234800 Gossypium hirsutum HOM05D006627 ORTHO05D007753 1.9e-13 82.8 317 29.3
AUR62010719 Chenopodium quinoa HOM05D006627 ORTHO05D007753 3.2e-13 82.0 1111 25.4
Rhsim07G0129200 Rhododendron simsii HOM05D006627 ORTHO05D007753 3.2e-13 82.0 903 22.8
Zm00001eb179470 Zea mays HOM05D006627 ORTHO05D007753 1.2e-12 80.1 1256 22.6
TWI23G0587 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 2.1e-12 79.3 1060 22.5
EL10Ac5g12811 Beta vulgaris HOM05D006627 ORTHO05D007753 4.6e-12 78.2 324 29.9
RcHm_v2.0_Chr1g0378101 Rosa chinensis HOM05D006627 ORTHO05D007753 4.6e-12 78.2 1040 25.0
FAN06G3118 Fragaria x ananassa HOM05D006627 ORTHO05D007753 7.9e-12 77.4 1071 25.1
FAN06G3804 Fragaria x ananassa HOM05D006627 ORTHO05D007753 7.9e-12 77.4 1074 25.1
TWI60G0847 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 7.9e-12 77.4 305 26.6
Duzib084G0535 Durio zibethinus HOM05D006627 ORTHO05D007753 1.8e-11 76.3 303 28.4
Thecc.03G182600 Theobroma cacao HOM05D006627 ORTHO05D007753 2.3e-11 75.9 1143 23.0
AUR62027265 Chenopodium quinoa HOM05D006627 ORTHO05D007753 3.9e-11 75.1 1115 23.8
FAN10G1355 Fragaria x ananassa HOM05D006627 ORTHO05D007753 8.7e-11 73.9 1097 25.0
Sc22g0005410 Simmondsia chinensis HOM05D006627 ORTHO05D007753 1.1e-10 73.6 349 26.1
DCAR_020266 Daucus carota HOM05D006627 ORTHO05D007753 1.5e-10 73.2 1130 23.2
THA.LOC104800273 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 1.9e-10 72.8 324 26.9
vmacro06638 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 1.9e-10 72.8 1028 25.3
COL.COLO4_28015 Corchorus olitorius HOM05D006627 ORTHO05D007753 3.3e-10 72.0 1024 24.0
FvH4_7g30110 Fragaria vesca HOM05D006627 ORTHO05D007753 3.3e-10 72.0 1028 24.9
FAN03G3330 Fragaria x ananassa HOM05D006627 ORTHO05D007753 4.3e-10 71.6 1134 24.7
Peaxi162Scf00618g00717 Petunia axillaris HOM05D006627 ORTHO05D007753 5.7e-10 71.2 358 26.5
MSTRG.27091 Avicennia marina HOM05D006627 ORTHO05D007753 9.6e-10 70.5 981 22.9
ECA233G6261 Erigeron canadensis HOM05D006627 ORTHO05D007753 9.6e-10 70.5 697 25.1
FAN10G1026 Fragaria x ananassa HOM05D006627 ORTHO05D007753 9.6e-10 70.5 1098 25.4
vmacro06637 Vaccinium macrocarpon HOM05D006627 ORTHO05D007753 9.6e-10 70.5 701 23.3
TWI14G0178 Tripterygium wilfordii HOM05D006627 ORTHO05D007753 3.7e-09 68.6 1124 22.7
EL10Ac5g12809 Beta vulgaris HOM05D006627 ORTHO05D007753 4.8e-09 68.2 1016 23.8
Atru.chr9.2148 Acer truncatum HOM05D006627 ORTHO05D007753 8.2e-09 67.4 154 37.7
THA.LOC104811963 Tarenaya hassleriana HOM05D008661 ORTHO05D010872 1.4e-08 66.6 330 27.3
Cc02_g02490 Coffea canephora HOM05D006627 ORTHO05D007753 1.8e-08 66.2 968 23.1
EL10Ac3g05437 Beta vulgaris HOM05D006627 ORTHO05D007753 2.4e-08 65.9 334 25.7
Sp7g23680 Schrenkiella parvula HOM05D008661 ORTHO05D010872 5.3e-08 64.7 371 28.0
Hund11448 Selenicereus undatus HOM05D006627 ORTHO05D007753 5.3e-08 64.7 1125 23.1
Aa31LG3G8880 Aethionema arabicum HOM05D008661 ORTHO05D010872 6.9e-08 64.3 315 28.9
Rhsim07G0129400 Rhododendron simsii HOM05D006627 ORTHO05D007753 6.9e-08 64.3 1010 23.0
ECA232G3189 Erigeron canadensis HOM05D006627 ORTHO05D007753 9.0e-08 63.9 250 26.0
A08p21040 Brassica napus HOM05D008661 ORTHO05D010872 1.5e-07 63.2 308 26.6
BraA08t34056Z Brassica rapa HOM05D008661 ORTHO05D010872 1.5e-07 63.2 308 26.6
AL7G27440 Arabidopsis lyrata HOM05D008661 ORTHO05D010872 2.0e-07 62.8 247 29.6
A08p21060 Brassica napus HOM05D008661 ORTHO05D010872 5.9e-07 61.2 308 26.3
BcaC07g38204 Brassica carinata HOM05D008661 ORTHO05D010872 1.3e-06 60.1 305 25.2
C08p09590 Brassica napus HOM05D008661 ORTHO05D010872 1.3e-06 60.1 304 27.3
BolC8t48627H Brassica oleracea HOM05D008661 ORTHO05D010872 1.3e-06 60.1 305 25.2
AUR62031403 Chenopodium quinoa HOM05D006627 ORTHO05D007753 1.7e-06 59.7 331 28.1
Ciclev10004200m.g Citrus clementina HOM05D006627 ORTHO05D007753 2.2e-06 59.3 1094 23.4
Ah.07g206700 Amaranthus hybridus HOM05D006627 ORTHO05D007753 3.8e-06 58.5 336 24.7
CAN.G236.7 Capsicum annuum HOM05D006627 ORTHO05D007753 3.8e-06 58.5 810 22.7
Sabra17G0119400 Salix brachista HOM05D001410 ORTHO05D006840 5.0e-06 58.2 692 23.3


User provided reference genes

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