Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 3.5e-225 784.6 401 100.0
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 1.4e-77 294.3 393 47.3
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 1.4e-77 294.3 263 58.6
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 2.7e-76 290.0 230 63.9
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 4.6e-76 289.3 233 64.8
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 6.7e-75 285.4 289 54.7
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 8.7e-75 285.0 287 54.7
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 9.6e-74 281.6 288 54.9
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 1.3e-73 281.2 298 53.0
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 1.6e-73 280.8 238 60.1
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 6.3e-73 278.9 334 49.1
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 1.1e-72 278.1 366 48.1
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 1.4e-72 277.7 306 51.0
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 4.1e-72 276.2 225 61.8
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 4.1e-72 276.2 288 54.5
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 6.9e-72 275.4 312 51.3
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 6.9e-72 275.4 290 55.9
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 9.0e-72 275.0 325 50.5
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.2e-71 274.6 291 51.9
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 2.6e-71 273.5 278 55.8
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 2.6e-71 273.5 244 58.2
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 5.9e-71 272.3 242 60.7
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 5.9e-71 272.3 329 47.4
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 7.6e-71 271.9 330 48.5
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 1.0e-70 271.6 285 53.0
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 1.3e-70 271.2 263 55.1
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 6.5e-70 268.9 232 61.2
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 6.5e-70 268.9 270 55.2
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 8.5e-70 268.5 232 61.6
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 5.5e-69 265.8 223 61.4
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 5.5e-69 265.8 355 49.0
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 1.2e-68 264.6 303 50.8
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 3.6e-68 263.1 240 60.8
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 4.6e-68 262.7 236 61.0
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 1.8e-67 260.8 232 59.9
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 2.3e-67 260.4 382 43.2
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 2.3e-67 260.4 291 51.5
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 3.0e-67 260.0 338 48.5
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 3.0e-67 260.0 237 60.3
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 3.9e-67 259.6 346 48.6
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 6.7e-67 258.8 379 45.1
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 1.9e-66 257.3 324 45.7
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 2.5e-66 256.9 226 56.2
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 3.3e-66 256.5 370 43.5
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 4.3e-66 256.1 354 48.3
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 7.4e-66 255.4 293 50.5
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 9.7e-66 255.0 261 55.2
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 9.7e-66 255.0 293 49.8
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 9.7e-66 255.0 230 60.9
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.6e-65 254.2 245 55.1
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 2.2e-65 253.8 321 50.8
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.8e-65 253.4 245 55.1
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 2.8e-65 253.4 296 50.0
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.8e-65 252.7 222 58.1
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 6.3e-65 252.3 291 50.5
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 6.3e-65 252.3 291 49.8
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 8.2e-65 251.9 256 55.1
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 8.2e-65 251.9 245 54.7
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 8.2e-65 251.9 222 59.0
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 8.2e-65 251.9 250 55.2
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.1e-64 251.5 245 55.1
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 1.8e-64 250.8 256 54.3
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 3.1e-64 250.0 250 54.4
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 4.1e-64 249.6 245 54.7
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 4.1e-64 249.6 250 54.8
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 6.9e-64 248.8 222 59.9
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 1.2e-63 248.1 245 55.5
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 1.5e-63 247.7 230 59.1
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 7.7e-63 245.4 232 57.3
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 7.7e-63 245.4 317 47.6
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 2.2e-62 243.8 398 41.2
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 2.9e-62 243.4 317 47.3
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 1.4e-61 241.1 234 55.6
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 2.5e-61 240.4 201 62.2
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 2.5e-61 240.4 268 50.0
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 5.5e-61 239.2 222 58.1
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 9.4e-61 238.4 359 43.5
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 1.6e-60 237.7 232 57.3
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 1.6e-60 237.7 364 42.6
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 2.1e-60 237.3 342 44.2
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 2.1e-60 237.3 194 62.9
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 2.1e-60 237.3 249 51.0
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 3.6e-60 236.5 199 62.3
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 3.6e-60 236.5 199 62.3
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 4.6e-60 236.1 209 59.8
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 7.9e-60 235.3 189 64.6
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.0e-59 235.0 249 50.6
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 3.9e-59 233.0 199 61.3
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 1.1e-58 231.5 312 45.8
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 3.3e-58 229.9 296 47.6
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 5.7e-58 229.2 174 64.9
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 2.8e-57 226.9 234 53.8
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 2.0e-55 220.7 345 40.9
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 1.3e-54 218.0 234 51.7
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 1.7e-54 217.6 180 63.3
CDE04G1109 Ceratophyllum demersum HOM05D040252 ORTHO05D007914 1.6e-52 211.1 310 47.7
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 3.9e-51 206.5 154 66.9
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 8.8e-51 205.3 348 40.5
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 1.7e-46 191.0 237 51.1
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 7.2e-45 185.7 187 54.5
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.7e-44 183.7 237 48.1
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 3.0e-43 180.3 175 58.9
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 2.0e-42 177.6 261 46.4
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 2.2e-41 174.1 152 58.6
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 1.4e-40 171.4 183 54.6
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 1.0e-35 155.2 359 32.9
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 1.4e-32 144.8 196 46.9
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 5.4e-32 142.9 101 72.3
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 2.3e-30 137.5 190 43.7
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.1e-29 135.2 192 48.4
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.4e-27 128.3 179 47.5
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 2.3e-27 127.5 178 47.2
CDE06G0605 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 5.2e-27 126.3 220 42.3
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 1.7e-25 121.3 214 35.5
Sed0027859 Sechium edule HOM05D006410 ORTHO05D007914 3.5e-23 113.6 156 43.6
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 2.8e-20 104.0 223 29.6
Duzib151G0462 Durio zibethinus HOM05D006410 ORTHO05D007914 4.1e-16 90.1 63 66.7
SEGI_07330 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 3.9e-14 83.6 214 31.3
CSS0000421 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 3.4e-10 70.5 190 35.8
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 2.2e-09 67.8 180 29.4
Lsat_1_v5_gn_8_97960 Lactuca sativa HOM05D006410 ORTHO05D007914 6.4e-09 66.2 60 55.0
Oeu030096.1 Olea europaea HOM05D006410 ORTHO05D007914 1.3e-06 58.5 124 41.9


User provided reference genes

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