Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0311 Ceratophyllum demersum HOM05D006492 ORTHO05D008432 0.0e+00 1588.9 815 100.0
MBI10_g16832_MAGBIO Magnolia biondii HOM05D006492 ORTHO05D008432 1.0e-231 807.4 839 49.8
TAR365G0557 Trochodendron aralioides HOM05D006492 ORTHO05D008432 1.8e-220 770.0 840 49.2
TAR365G0379 Trochodendron aralioides HOM05D006492 ORTHO05D008432 3.4e-219 765.8 840 49.0
Dinv38285 Davidia involucrata HOM05D006492 ORTHO05D008432 2.8e-213 746.1 825 47.3
Nn1g03104 Nelumbo nucifera HOM05D006492 ORTHO05D008432 6.3e-213 745.0 835 46.6
CSS0015325 Camellia sinensis var. sinensis HOM05D006492 ORTHO05D008432 5.3e-212 741.9 829 47.3
Lju414A5T31 Lonicera japonica HOM05D006492 ORTHO05D008432 1.5e-203 713.8 825 46.5
Haze_11549 Corylus avellana HOM05D006492 ORTHO05D008432 2.2e-202 709.9 833 45.7
Cfa014875 Carpinus fangiana HOM05D006492 ORTHO05D008432 2.9e-202 709.5 835 45.3
Thecc.04G212600 Theobroma cacao HOM05D006492 ORTHO05D008432 1.6e-200 703.7 831 44.6
CiPaw.01G204100 Carya illinoinensis HOM05D006492 ORTHO05D008432 1.5e-198 697.2 834 45.3
Aqoxy2G03837 Aquilegia oxysepala HOM05D006492 ORTHO05D008432 3.1e-196 689.5 841 45.2
GSVIVG01029042001 Vitis vinifera HOM05D006492 ORTHO05D008432 2.6e-195 686.4 830 44.0
ATR0787G047 Amborella trichopoda HOM05D006492 ORTHO05D008432 4.5e-195 685.6 840 44.9
Actinidia25080 Actinidia chinensis HOM05D006492 ORTHO05D008432 2.9e-194 682.9 835 44.7
Rhsim09G0049200 Rhododendron simsii HOM05D006492 ORTHO05D008432 2.9e-194 682.9 831 44.2
Duzib212G0418 Durio zibethinus HOM05D006492 ORTHO05D008432 5.0e-194 682.2 834 43.2
vmacro00516 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 7.2e-193 678.3 837 44.0
Manes.15G049000 Manihot esculenta HOM05D006492 ORTHO05D008432 2.7e-192 676.4 831 43.8
QL05p063769 Quercus lobata HOM05D006492 ORTHO05D008432 2.7e-192 676.4 830 44.7
Potri.003G175300 Populus trichocarpa HOM05D006492 ORTHO05D008432 8.8e-191 671.4 832 43.6
COL.COLO4_34090 Corchorus olitorius HOM05D006492 ORTHO05D008432 2.0e-190 670.2 834 42.6
Gorai.006G055600 Gossypium raimondii HOM05D006492 ORTHO05D008432 1.6e-187 660.6 839 42.4
Gohir.D09G053008 Gossypium hirsutum HOM05D006492 ORTHO05D008432 2.6e-187 659.8 839 42.7
MSTRG.24638 Avicennia marina HOM05D006492 ORTHO05D008432 1.7e-186 657.1 830 43.1
Potri.001G053000 Populus trichocarpa HOM05D006492 ORTHO05D008432 7.2e-185 651.7 836 42.8
Nitab4.5_0012325g0010 Nicotiana tabacum HOM05D006492 ORTHO05D008432 3.0e-183 646.4 831 42.7
ECA233G5226 Erigeron canadensis HOM05D006492 ORTHO05D008432 1.2e-182 644.4 820 42.2
Migut.N00332 Erythranthe guttata HOM05D006492 ORTHO05D008432 2.6e-182 643.3 842 42.6
EL10Ac3g06781 Beta vulgaris HOM05D006492 ORTHO05D008432 1.1e-180 637.9 841 42.0
MD00G1101100 Malus domestica HOM05D006492 ORTHO05D008432 1.1e-180 637.9 832 42.5
Nitab4.5_0000493g0030 Nicotiana tabacum HOM05D006492 ORTHO05D008432 5.3e-180 635.6 831 41.9
Prupe.1G060300 Prunus persica HOM05D006492 ORTHO05D008432 7.0e-180 635.2 836 42.8
Peaxi162Scf00047g01324 Petunia axillaris HOM05D006492 ORTHO05D008432 1.2e-179 634.4 831 42.1
AUR62035934 Chenopodium quinoa HOM05D006492 ORTHO05D008432 1.6e-179 634.0 835 41.9
Sabra01G0037500 Salix brachista HOM05D006492 ORTHO05D008432 2.7e-179 633.3 826 41.8
Sopen09g034300 Solanum pennellii HOM05D006492 ORTHO05D008432 7.7e-179 631.7 818 42.5
Ciclev10004244m.g Citrus clementina HOM05D006492 ORTHO05D008432 8.5e-178 628.2 832 41.6
Cc03_g07180 Coffea canephora HOM05D006492 ORTHO05D008432 2.7e-176 623.2 834 43.2
SGA_v2.0_scaffold2G00843 Striga asiatica HOM05D006492 ORTHO05D008432 2.7e-176 623.2 831 41.3
Oeu051651.1 Olea europaea HOM05D006492 ORTHO05D008432 3.6e-176 622.9 773 43.3
CAN.G1552.5 Capsicum annuum HOM05D006492 ORTHO05D008432 8.0e-176 621.7 831 41.4
FAN07G0933 Fragaria x ananassa HOM05D006492 ORTHO05D008432 1.3e-173 614.4 832 41.7
PSO017G3024 Papaver somniferum HOM05D006492 ORTHO05D008432 8.3e-173 611.7 879 42.3
FAN12G2087 Fragaria x ananassa HOM05D006492 ORTHO05D008432 1.4e-172 610.9 832 41.6
DCAR_002278 Daucus carota HOM05D006492 ORTHO05D008432 1.8e-172 610.5 853 39.9
FAN22G2187 Fragaria x ananassa HOM05D006492 ORTHO05D008432 1.8e-172 610.5 832 41.8
HanXRQChr07g0185861 Helianthus annuus HOM05D006492 ORTHO05D008432 2.4e-172 610.1 819 42.0
Hund24849 Selenicereus undatus HOM05D006492 ORTHO05D008432 2.4e-172 610.1 836 42.0
Sc14g0004710 Simmondsia chinensis HOM05D006492 ORTHO05D008432 2.4e-172 610.1 832 41.1
Ah.04g153340 Amaranthus hybridus HOM05D006492 ORTHO05D008432 4.1e-172 609.4 834 41.1
unitig_899.g15531 Utricularia gibba HOM05D006492 ORTHO05D008432 7.0e-172 608.6 828 40.7
RcHm_v2.0_Chr4g0396881 Rosa chinensis HOM05D006492 ORTHO05D008432 3.5e-171 606.3 830 41.8
SalBow3G2597 Salvia bowleyana HOM05D006492 ORTHO05D008432 3.5e-171 606.3 737 44.4
PSO063G2396 Papaver somniferum HOM05D006492 ORTHO05D008432 1.0e-170 604.7 874 42.1
Glyma.20G197700 Glycine max HOM05D006492 ORTHO05D008432 1.5e-169 600.9 840 40.8
VMungo0720G0701 Vigna mungo HOM05D006492 ORTHO05D008432 1.4e-167 594.3 839 40.2
Lj5g0018955 Lotus japonicus HOM05D006492 ORTHO05D008432 2.3e-167 593.6 836 39.7
TWI09G1643 Tripterygium wilfordii HOM05D006492 ORTHO05D008432 5.2e-167 592.4 838 40.2
Phvul.007G134600 Phaseolus vulgaris HOM05D006492 ORTHO05D008432 1.2e-166 591.3 836 40.1
Lalb_Chr21g0312661 Lupinus albus HOM05D006492 ORTHO05D008432 2.6e-166 590.1 834 40.9
CARHR004030 Cardamine hirsuta HOM05D006492 ORTHO05D008432 4.4e-166 589.3 823 39.0
ClCG05G003620 Citrullus lanatus HOM05D006492 ORTHO05D008432 4.4e-166 589.3 828 39.9
CANSAT78G0108 Cannabis sativa HOM05D006492 ORTHO05D008432 1.4e-164 584.3 843 39.9
Glyma.10G192800 Glycine max HOM05D006492 ORTHO05D008432 3.2e-164 583.2 836 40.0
PGR142G2376 Punica granatum HOM05D006492 ORTHO05D008432 4.1e-164 582.8 835 39.8
AT1G04650 Arabidopsis thaliana HOM05D006492 ORTHO05D008432 1.2e-163 581.3 829 38.7
arahy.Tifrunner.gnm1.ann1.TP3X9S Arachis hypogaea HOM05D006492 ORTHO05D008432 2.7e-163 580.1 836 39.7
Eucgr.H00098 Eucalyptus grandis HOM05D006492 ORTHO05D008432 3.5e-163 579.7 835 38.8
Zm00001eb003580 Zea mays HOM05D006492 ORTHO05D008432 1.0e-162 578.2 836 40.3
AL1G14360 Arabidopsis lyrata HOM05D006492 ORTHO05D008432 2.3e-162 577.0 831 38.5
Lsat_1_v5_gn_6_62680 Lactuca sativa HOM05D006492 ORTHO05D008432 4.3e-161 572.8 822 41.0
Sp1g03490 Schrenkiella parvula HOM05D006492 ORTHO05D008432 7.3e-161 572.0 826 39.0
TPR.G13408 Trifolium pratense HOM05D006492 ORTHO05D008432 1.2e-160 571.2 852 37.9
FAN17G1964 Fragaria x ananassa HOM05D006492 ORTHO05D008432 4.7e-160 569.3 832 40.4
BolC8t46943H Brassica oleracea HOM05D006492 ORTHO05D008432 1.0e-159 568.2 834 39.1
CsaV3_3G011330 Cucumis sativus L. HOM05D006492 ORTHO05D008432 2.3e-159 567.0 827 38.9
Ca_10406_v3 Cicer arietinum L. HOM05D006492 ORTHO05D008432 4.0e-159 566.2 851 37.8
C08p01350 Brassica napus HOM05D006492 ORTHO05D008432 6.8e-159 565.5 834 39.0
Cpa.g.sc59.86 Carica papaya HOM05D006492 ORTHO05D008432 8.9e-159 565.1 785 41.7
Medtr1g090050 Medicago truncatula HOM05D006492 ORTHO05D008432 8.9e-159 565.1 847 38.3
Thhalv10006668m.g Eutrema salsugineum HOM05D006492 ORTHO05D008432 4.4e-158 562.8 829 38.5
A08p36780 Brassica napus HOM05D006492 ORTHO05D008432 1.3e-157 561.2 832 39.1
BraA08t35581Z Brassica rapa HOM05D006492 ORTHO05D008432 1.1e-156 558.1 832 38.9
Carub.0001s0390 Capsella rubella HOM05D006492 ORTHO05D008432 2.4e-156 557.0 827 38.6
THA.LOC104816017 Tarenaya hassleriana HOM05D006492 ORTHO05D008432 2.0e-155 553.9 831 39.7
MELO3C006341.2 Cucumis melo HOM05D006492 ORTHO05D008432 1.0e-154 551.6 808 38.4
Sed0001454 Sechium edule HOM05D006492 ORTHO05D008432 2.3e-154 550.4 828 37.3
Psat6g170280 Pisum sativum HOM05D006492 ORTHO05D008432 8.6e-154 548.5 849 37.8
A10p03080 Brassica napus HOM05D006492 ORTHO05D008432 1.2e-152 544.7 824 37.5
Atru.chr4.1802 Acer truncatum HOM05D006492 ORTHO05D008432 1.6e-152 544.3 659 43.6
Aa31LG1G20220 Aethionema arabicum HOM05D006492 ORTHO05D008432 8.9e-151 538.5 835 37.2
Os03g0144000 Oryza sativa ssp. japonica HOM05D006492 ORTHO05D008432 8.3e-149 531.9 855 37.5
BcaC07g36892 Brassica carinata HOM05D006492 ORTHO05D008432 4.1e-148 529.6 833 37.1
SEGI_21616 Sequoiadendron giganteum HOM05D006492 ORTHO05D008432 8.1e-136 488.8 853 35.8
vmacro22821 Vaccinium macrocarpon HOM05D006492 ORTHO05D008432 1.6e-131 474.6 828 36.6
SHI00019 Sapria himalayana HOM05D006492 ORTHO05D000009 3.0e-130 470.3 853 35.4
BraA10t42581Z Brassica rapa HOM05D006492 ORTHO05D008432 1.2e-99 368.6 576 37.3
FvH4_4g05680 Fragaria vesca HOM05D006492 ORTHO05D008432 3.3e-97 360.5 521 39.0
Solyc09g091370.4 Solanum lycopersicum HOM05D006492 ORTHO05D008432 1.4e-90 338.6 491 39.7
HPP92_025560 Vanilla planifolia HOM05D006492 ORTHO05D008432 2.7e-67 261.2 321 47.0
Pp3c16_18660 Physcomitrium patens HOM05D006492 ORTHO05D008432 9.4e-60 236.1 850 24.7
HPP92_025559 Vanilla planifolia HOM05D006492 ORTHO05D008432 2.8e-56 224.6 347 40.9
SMO117G0361 Selaginella moellendorffii HOM05D006492 ORTHO05D008432 9.2e-47 193.0 726 26.2
Mapoly0061s0085 Marchantia polymorpha HOM05D006492 ORTHO05D008432 1.2e-30 139.4 453 25.8
AagrBONN_evm.TU.Sc2ySwM_117.2272 Anthoceros agrestis HOM05D006492 ORTHO05D008432 2.3e-21 108.6 405 25.2
C05p02850 Brassica napus HOM05D006492 ORTHO05D008432 1.5e-20 105.9 136 41.2
arahy.Tifrunner.gnm1.ann1.LCJ3P1 Arachis hypogaea HOM05D006492 ORTHO05D008432 5.2e-18 97.4 149 39.6
CBR_g61877 Chara braunii HOM05D006492 ORTHO05D008432 3.8e-16 91.3 725 19.7
C05p02840 Brassica napus HOM05D006492 ORTHO05D008432 3.1e-10 71.6 129 34.1


User provided reference genes

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