Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0224 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 1.9e-237 825.5 417 100.0
CDE07G0746 Ceratophyllum demersum HOM05D006079 ORTHO05D008156 2.0e-159 566.2 413 70.5
CiPaw.10G153700 Carya illinoinensis HOM05D006079 ORTHO05D008156 1.1e-152 543.9 418 64.1
Cfa017268 Carpinus fangiana HOM05D006079 ORTHO05D008156 9.2e-152 540.8 418 64.8
GSVIVG01034026001 Vitis vinifera HOM05D006079 ORTHO05D008156 5.9e-151 538.1 412 66.7
Duzib093G0682 Durio zibethinus HOM05D006079 ORTHO05D008156 5.0e-150 535.0 410 63.7
Thecc.05G024000 Theobroma cacao HOM05D006079 ORTHO05D008156 6.6e-150 534.6 411 65.7
Manes.08G086700 Manihot esculenta HOM05D006079 ORTHO05D008156 1.5e-149 533.5 416 63.0
Gorai.012G110900 Gossypium raimondii HOM05D006079 ORTHO05D008156 5.6e-149 531.6 412 62.6
Haze_20934 Corylus avellana HOM05D006079 ORTHO05D008156 1.6e-148 530.0 422 63.0
CSS0045639 Camellia sinensis var. sinensis HOM05D006079 ORTHO05D008156 2.8e-148 529.3 407 66.3
Gohir.A04G087500 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.6e-148 528.9 412 62.9
Duzib128G0993 Durio zibethinus HOM05D006079 ORTHO05D008156 2.3e-147 526.2 411 65.0
Glyma.07G143100 Glycine max HOM05D006079 ORTHO05D008156 1.2e-146 523.9 411 65.2
FvH4_6g12250 Fragaria vesca HOM05D006079 ORTHO05D008156 3.4e-146 522.3 416 64.2
FAN14G2872 Fragaria x ananassa HOM05D006079 ORTHO05D008156 4.4e-146 521.9 416 63.9
Dinv35521 Davidia involucrata HOM05D006079 ORTHO05D008156 7.5e-146 521.2 420 63.8
PGR031G3170 Punica granatum HOM05D006079 ORTHO05D008156 9.8e-146 520.8 421 64.8
Prupe.6G269000 Prunus persica HOM05D006079 ORTHO05D008156 1.3e-145 520.4 416 63.7
FAN02G2404 Fragaria x ananassa HOM05D006079 ORTHO05D008156 2.9e-145 519.2 416 63.5
Actinidia13795 Actinidia chinensis HOM05D006079 ORTHO05D008156 3.7e-145 518.8 409 64.1
Gohir.D04G127900 Gossypium hirsutum HOM05D006079 ORTHO05D008156 3.7e-145 518.8 412 61.7
COL.COLO4_14632 Corchorus olitorius HOM05D006079 ORTHO05D008156 4.9e-145 518.5 411 64.2
FAN09G0680 Fragaria x ananassa HOM05D006079 ORTHO05D008156 1.1e-144 517.3 416 63.5
Lalb_Chr01g0022871 Lupinus albus HOM05D006079 ORTHO05D008156 1.1e-144 517.3 414 64.5
QL07p036333 Quercus lobata HOM05D006079 ORTHO05D008156 1.1e-144 517.3 420 63.1
MD12G1158600 Malus domestica HOM05D006079 ORTHO05D008156 1.9e-144 516.5 416 63.2
Ciclev10011790m.g Citrus clementina HOM05D006079 ORTHO05D008156 3.2e-144 515.8 419 64.2
FAN05G0163 Fragaria x ananassa HOM05D006079 ORTHO05D008156 4.1e-144 515.4 406 64.5
RcHm_v2.0_Chr3g0464051 Rosa chinensis HOM05D006079 ORTHO05D008156 1.6e-143 513.5 406 64.5
Atru.chr8.2129 Acer truncatum HOM05D006079 ORTHO05D008156 2.7e-143 512.7 416 60.6
Eucgr.B02761 Eucalyptus grandis HOM05D006079 ORTHO05D008156 3.5e-143 512.3 414 63.5
PGSC0003DMG400020333 Solanum tuberosum HOM05D006079 ORTHO05D008156 4.6e-143 511.9 420 62.4
CANSAT35G1087 Cannabis sativa HOM05D006079 ORTHO05D008156 7.8e-143 511.1 416 63.9
Aqoxy1G00752 Aquilegia oxysepala HOM05D006079 ORTHO05D008156 1.0e-142 510.8 416 63.0
ClCG04G007320 Citrullus lanatus HOM05D006079 ORTHO05D008156 1.0e-142 510.8 416 63.0
PSO585G0039 Papaver somniferum HOM05D006079 ORTHO05D008156 1.0e-142 510.8 412 61.2
Solyc09g011880.3 Solanum lycopersicum HOM05D006079 ORTHO05D008156 1.0e-142 510.8 420 63.1
Sopen09g006700 Solanum pennellii HOM05D006079 ORTHO05D008156 1.0e-142 510.8 420 62.9
MELO3C003219.2 Cucumis melo HOM05D006079 ORTHO05D008156 1.3e-142 510.4 416 62.5
Cpa.g.sc56.97 Carica papaya HOM05D006079 ORTHO05D008156 1.7e-142 510.0 415 63.9
CsaV3_4G025930 Cucumis sativus L. HOM05D006079 ORTHO05D008156 1.7e-142 510.0 416 62.7
Nn2g13580 Nelumbo nucifera HOM05D006079 ORTHO05D008156 2.3e-142 509.6 410 62.0
Psat3g135200 Pisum sativum HOM05D006079 ORTHO05D008156 2.3e-142 509.6 416 63.7
Sabra06G0073200 Salix brachista HOM05D006079 ORTHO05D008156 3.0e-142 509.2 414 62.8
Ca_09158_v3 Cicer arietinum L. HOM05D006079 ORTHO05D008156 5.0e-142 508.4 413 63.7
Medtr7g066250 Medicago truncatula HOM05D006079 ORTHO05D008156 3.3e-141 505.8 414 64.5
Lj2A83T75 Lonicera japonica HOM05D006079 ORTHO05D008156 7.3e-141 504.6 404 64.9
Nitab4.5_0007539g0010 Nicotiana tabacum HOM05D006079 ORTHO05D008156 7.3e-141 504.6 421 62.2
Peaxi162Scf01352g00015 Petunia axillaris HOM05D006079 ORTHO05D008156 1.6e-140 503.4 422 60.2
Sed0002088 Sechium edule HOM05D006079 ORTHO05D008156 1.6e-140 503.4 412 61.4
Sc25g0003370 Simmondsia chinensis HOM05D006079 ORTHO05D008156 2.1e-140 503.1 416 62.3
arahy.Tifrunner.gnm1.ann1.3KU04F Arachis hypogaea HOM05D006079 ORTHO05D008156 3.6e-140 502.3 412 63.3
Nitab4.5_0000008g0510 Nicotiana tabacum HOM05D006079 ORTHO05D008156 4.7e-140 501.9 421 61.5
PSO384G3626 Papaver somniferum HOM05D006079 ORTHO05D008156 4.7e-140 501.9 412 60.9
TWI77G0608 Tripterygium wilfordii HOM05D006079 ORTHO05D008156 4.7e-140 501.9 417 60.0
TAR633G1690 Trochodendron aralioides HOM05D006079 ORTHO05D008156 4.7e-140 501.9 424 61.1
Phvul.008G111400 Phaseolus vulgaris HOM05D006079 ORTHO05D008156 1.1e-139 500.7 412 62.6
Potri.006G095400 Populus trichocarpa HOM05D006079 ORTHO05D008156 5.2e-139 498.4 413 60.3
Cc06_g01790 Coffea canephora HOM05D006079 ORTHO05D008156 2.0e-138 496.5 422 62.1
Lj1g0026135 Lotus japonicus HOM05D006079 ORTHO05D008156 3.4e-138 495.7 414 63.3
SGA_v2.0_scaffold85G26780 Striga asiatica HOM05D006079 ORTHO05D008156 8.3e-137 491.1 420 60.7
arahy.Tifrunner.gnm1.ann1.GZPT0A Arachis hypogaea HOM05D006079 ORTHO05D008156 1.9e-136 490.0 436 60.1
HanXRQChr04g0124711 Helianthus annuus HOM05D006079 ORTHO05D008156 3.2e-136 489.2 414 58.9
MSTRG.5605 Avicennia marina HOM05D006079 ORTHO05D008156 4.6e-135 485.3 418 62.0
MBI05_g36624_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 1.3e-134 483.8 328 72.6
HPP92_006654 Vanilla planifolia HOM05D006079 ORTHO05D008156 3.0e-134 482.6 386 59.3
ECA236G0495 Erigeron canadensis HOM05D006079 ORTHO05D008156 1.1e-133 480.7 394 58.9
Migut.J00236 Erythranthe guttata HOM05D006079 ORTHO05D008156 2.1e-132 476.5 410 58.8
Rhsim05G0203500 Rhododendron simsii HOM05D006079 ORTHO05D008156 1.8e-131 473.4 350 68.6
AT2G38000 Arabidopsis thaliana HOM05D006079 ORTHO05D008156 2.2e-129 466.5 412 55.8
AUR62041356 Chenopodium quinoa HOM05D006079 ORTHO05D008156 4.9e-129 465.3 395 62.5
THA.LOC104823390 Tarenaya hassleriana HOM05D006079 ORTHO05D008156 1.1e-128 464.2 413 57.4
BcaB02g09226 Brassica carinata HOM05D006079 ORTHO05D008156 3.2e-128 462.6 411 55.5
Oeu015011.1 Olea europaea HOM05D006079 ORTHO05D008156 4.1e-128 462.2 385 63.6
Aa31LG5G23170 Aethionema arabicum HOM05D006079 ORTHO05D008156 2.1e-127 459.9 411 57.7
Ah.11g045330 Amaranthus hybridus HOM05D006079 ORTHO05D008156 2.7e-127 459.5 425 58.6
BcaC02g11943 Brassica carinata HOM05D006079 ORTHO05D008156 6.0e-127 458.4 411 55.0
CARHR132560 Cardamine hirsuta HOM05D006079 ORTHO05D008156 7.8e-127 458.0 413 54.0
Thhalv10016725m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 3.0e-126 456.1 405 54.8
BolC4t22573H Brassica oleracea HOM05D006079 ORTHO05D008156 6.6e-126 454.9 411 54.7
Actinidia29142 Actinidia chinensis HOM05D006079 ORTHO05D008156 1.1e-125 454.1 389 61.7
Os05g0316200 Oryza sativa ssp. japonica HOM05D006079 ORTHO05D008156 1.1e-125 454.1 408 58.3
Sp4g20320 Schrenkiella parvula HOM05D006079 ORTHO05D008156 1.1e-125 454.1 410 56.8
AL4G34980 Arabidopsis lyrata HOM05D006079 ORTHO05D008156 1.5e-125 453.8 411 54.7
A05p08000 Brassica napus HOM05D006079 ORTHO05D008156 7.3e-125 451.4 416 54.3
ATR0618G129 Amborella trichopoda HOM05D006079 ORTHO05D008156 1.2e-124 450.7 419 58.2
BraA05t19766Z Brassica rapa HOM05D006079 ORTHO05D008156 2.4e-123 446.4 413 54.2
BcaB02g09227 Brassica carinata HOM05D006079 ORTHO05D008156 5.8e-122 441.8 411 54.3
Carub.0004s1997 Capsella rubella HOM05D006079 ORTHO05D008156 9.9e-122 441.0 411 53.0
Lsat_1_v5_gn_8_82341 Lactuca sativa HOM05D006079 ORTHO05D008156 1.3e-121 440.7 406 59.9
DCAR_024040 Daucus carota HOM05D006079 ORTHO05D008156 2.2e-121 439.9 450 50.9
VMungo1383G1007 Vigna mungo HOM05D006079 ORTHO05D008156 7.1e-120 434.9 371 63.1
Zm00001eb169630 Zea mays HOM05D006079 ORTHO05D008156 3.5e-119 432.6 402 54.7
SEGI_08405 Sequoiadendron giganteum HOM05D006079 ORTHO05D008156 7.3e-117 424.9 326 68.4
vmacro20226 Vaccinium macrocarpon HOM05D006079 ORTHO05D008156 4.0e-115 419.1 420 54.0
C04p09660 Brassica napus HOM05D006079 ORTHO05D008156 6.9e-115 418.3 393 54.7
EL10Ac5g11535 Beta vulgaris HOM05D006079 ORTHO05D008156 1.5e-114 417.2 424 51.2
unitig_26.g9105 Utricularia gibba HOM05D006079 ORTHO05D008156 8.4e-113 411.4 397 53.4
Hma1.2p1_0763F.1_g214490 Hydrangea macrophylla HOM05D006079 ORTHO05D008156 1.6e-108 397.1 428 54.7
Gohir.A13G086740 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.2e-103 380.9 410 50.5
TPR.G29287 Trifolium pratense HOM05D006079 ORTHO05D008156 3.3e-93 346.3 263 67.7
AagrBONN_evm.TU.Sc2ySwM_117.3694 Anthoceros agrestis HOM05D006079 ORTHO05D008156 2.1e-87 327.0 319 52.0
Mapoly0040s0094 Marchantia polymorpha HOM05D006079 ORTHO05D008156 1.2e-82 311.2 413 43.8
SMO172G0100 Selaginella moellendorffii HOM05D006079 ORTHO05D008156 1.1e-80 304.7 320 53.8
CAN.G338.65 Capsicum annuum HOM05D006079 ORTHO05D008156 5.5e-80 302.4 293 56.3
Migut.J00237 Erythranthe guttata HOM05D006079 ORTHO05D008156 4.4e-77 292.7 396 41.7
Pp3c16_16710 Physcomitrium patens HOM05D006079 ORTHO05D008156 4.4e-77 292.7 380 45.5
HPP92_006629 Vanilla planifolia HOM05D006079 ORTHO05D008156 5.0e-73 279.3 263 52.1
BcaC02g11941 Brassica carinata HOM05D006079 ORTHO05D008156 2.0e-69 267.3 217 58.5
Gohir.D13G085200 Gossypium hirsutum HOM05D006079 ORTHO05D008156 9.1e-59 231.9 194 57.2
Gohir.A01G178136 Gossypium hirsutum HOM05D006079 ORTHO05D008156 2.3e-49 200.7 164 59.1
CAN.G686.13 Capsicum annuum HOM05D006079 ORTHO05D008156 2.5e-48 197.2 136 69.1
Lsat_1_v5_gn_5_162881 Lactuca sativa HOM05D006079 ORTHO05D008156 6.8e-46 189.1 150 60.7
MD04G1144700 Malus domestica HOM05D006079 ORTHO05D008156 8.9e-38 162.2 144 54.9
Thhalv10017300m.g Eutrema salsugineum HOM05D006079 ORTHO05D008156 4.4e-29 133.3 224 36.6
TAR636G2503 Trochodendron aralioides HOM05D006079 ORTHO05D008156 5.8e-29 132.9 81 80.2
Gorai.006G157700 Gossypium raimondii HOM05D006079 ORTHO05D008156 1.7e-28 131.3 124 54.0
Gohir.D09G137350 Gossypium hirsutum HOM05D006079 ORTHO05D008156 1.1e-27 128.6 124 53.2
QL07p036284 Quercus lobata HOM05D006079 ORTHO05D338014 3.5e-26 123.6 76 72.4
Cc02_g12960 Coffea canephora HOM05D006079 ORTHO05D008156 2.5e-24 117.5 83 67.5
MD04G1144600 Malus domestica HOM05D006079 ORTHO05D032748 3.6e-15 87.0 93 58.1
MBI05_g36625_MAGBIO Magnolia biondii HOM05D006079 ORTHO05D008156 2.2e-12 77.8 78 46.2
TPR.G34865 Trifolium pratense HOM05D006079 ORTHO05D008156 5.1e-09 66.6 101 43.6
BraA05t21464Z Brassica rapa HOM05D006079 ORTHO05D032748 9.6e-08 62.4 52 53.8


User provided reference genes

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