Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0217 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 7.2e-147 523.9 257 100.0
CSS0023417 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 2.0e-117 426.0 257 78.6
Actinidia15622 Actinidia chinensis HOM05D005529 ORTHO05D006800 1.7e-116 422.9 257 77.8
GSVIVG01013675001 Vitis vinifera HOM05D005529 ORTHO05D006800 3.8e-116 421.8 257 77.0
Cc10_g06360 Coffea canephora HOM05D005529 ORTHO05D006800 5.0e-116 421.4 257 77.8
CsaV3_6G004830 Cucumis sativus L. HOM05D005529 ORTHO05D006800 8.5e-116 420.6 255 77.6
CAN.G26.7 Capsicum annuum HOM05D005529 ORTHO05D006800 1.9e-115 419.5 257 77.0
Peaxi162Scf00160g01637 Petunia axillaris HOM05D005529 ORTHO05D006800 1.9e-115 419.5 257 78.2
Eucgr.F02670 Eucalyptus grandis HOM05D005529 ORTHO05D006800 2.5e-115 419.1 257 77.4
QL02p036323 Quercus lobata HOM05D005529 ORTHO05D006800 3.2e-115 418.7 255 80.0
PGR042G1245 Punica granatum HOM05D005529 ORTHO05D006800 4.2e-115 418.3 257 77.8
Cpa.g.sc26.128 Carica papaya HOM05D005529 ORTHO05D006800 7.2e-115 417.5 257 77.8
QL02p036742 Quercus lobata HOM05D005529 ORTHO05D006800 7.2e-115 417.5 255 79.6
CANSAT25G1808 Cannabis sativa HOM05D005529 ORTHO05D006800 9.4e-115 417.2 257 79.0
Haze_17835 Corylus avellana HOM05D005529 ORTHO05D006800 9.4e-115 417.2 257 79.8
Haze_17841 Corylus avellana HOM05D005529 ORTHO05D006800 9.4e-115 417.2 257 79.8
Sed0025527 Sechium edule HOM05D005529 ORTHO05D006800 1.2e-114 416.8 255 77.3
Nn1g05167 Nelumbo nucifera HOM05D005529 ORTHO05D006800 3.6e-114 415.2 257 77.0
Oeu027223.1 Olea europaea HOM05D005529 ORTHO05D006800 3.6e-114 415.2 257 78.6
Glyma.20G171800 Glycine max HOM05D005529 ORTHO05D006800 4.7e-114 414.8 255 78.0
Prupe.8G045100 Prunus persica HOM05D005529 ORTHO05D006800 4.7e-114 414.8 257 78.2
Lj4A706T78 Lonicera japonica HOM05D005529 ORTHO05D006800 6.1e-114 414.5 255 77.3
PSO675G2610 Papaver somniferum HOM05D005529 ORTHO05D006800 6.1e-114 414.5 256 78.5
Solyc12g056770.3 Solanum lycopersicum HOM05D005529 ORTHO05D006800 8.0e-114 414.1 255 77.6
Sopen12g029450 Solanum pennellii HOM05D005529 ORTHO05D006800 8.0e-114 414.1 255 77.6
Aqoxy6G00458 Aquilegia oxysepala HOM05D005529 ORTHO05D006800 1.0e-113 413.7 257 77.0
DCAR_019977 Daucus carota HOM05D005529 ORTHO05D006800 1.8e-113 412.9 254 76.0
Migut.C00162 Erythranthe guttata HOM05D005529 ORTHO05D006800 1.8e-113 412.9 255 77.6
Migut.O00737 Erythranthe guttata HOM05D005529 ORTHO05D006800 1.8e-113 412.9 255 77.6
MD05G1037000 Malus domestica HOM05D005529 ORTHO05D006800 2.3e-113 412.5 257 78.6
Psat6g189800 Pisum sativum HOM05D005529 ORTHO05D006800 3.0e-113 412.1 257 77.0
Sc26g0003120 Simmondsia chinensis HOM05D005529 ORTHO05D006800 3.0e-113 412.1 257 76.7
MSTRG.965 Avicennia marina HOM05D005529 ORTHO05D006800 4.0e-113 411.8 257 77.4
CiPaw.15G011100 Carya illinoinensis HOM05D005529 ORTHO05D006800 4.0e-113 411.8 255 78.8
Thecc.08G196300 Theobroma cacao HOM05D005529 ORTHO05D006800 4.0e-113 411.8 257 75.5
Lj5g0011658 Lotus japonicus HOM05D005529 ORTHO05D006800 6.8e-113 411.0 257 76.7
Potri.005G199600 Populus trichocarpa HOM05D005529 ORTHO05D006800 6.8e-113 411.0 254 78.3
Medtr1g097380 Medicago truncatula HOM05D005529 ORTHO05D006800 8.8e-113 410.6 257 76.7
PSO541G1243 Papaver somniferum HOM05D005529 ORTHO05D006800 8.8e-113 410.6 256 77.7
Atru.chr13.1964 Acer truncatum HOM05D005529 ORTHO05D006800 1.2e-112 410.2 257 76.7
Sabra05G0151800 Salix brachista HOM05D005529 ORTHO05D006800 1.2e-112 410.2 254 78.0
Glyma.10G219900 Glycine max HOM05D005529 ORTHO05D006800 1.5e-112 409.8 255 76.9
Manes.02G186100 Manihot esculenta HOM05D005529 ORTHO05D006800 1.5e-112 409.8 258 76.4
Nitab4.5_0004541g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 2.6e-112 409.1 259 77.2
CiPaw.16G006900 Carya illinoinensis HOM05D005529 ORTHO05D006800 4.4e-112 408.3 255 77.6
TWI34G1474 Tripterygium wilfordii HOM05D005529 ORTHO05D006800 2.8e-111 405.6 257 75.1
THA.LOC104800098 Tarenaya hassleriana HOM05D005529 ORTHO05D006800 3.7e-111 405.2 257 75.1
Ah.05g168410 Amaranthus hybridus HOM05D005529 ORTHO05D006800 4.8e-111 404.8 255 75.3
BcaC08g46609 Brassica carinata HOM05D005529 ORTHO05D006800 6.3e-111 404.4 257 75.5
A07p37940 Brassica napus HOM05D005529 ORTHO05D006800 6.3e-111 404.4 257 75.5
C06p45850 Brassica napus HOM05D005529 ORTHO05D006800 6.3e-111 404.4 257 75.5
BolC6t39637H Brassica oleracea HOM05D005529 ORTHO05D006800 6.3e-111 404.4 257 75.5
BraA07t31359Z Brassica rapa HOM05D005529 ORTHO05D006800 6.3e-111 404.4 257 75.5
AT1G71790 Arabidopsis thaliana HOM05D005529 ORTHO05D006800 8.3e-111 404.1 255 75.7
Thhalv10019028m.g Eutrema salsugineum HOM05D005529 ORTHO05D006800 8.3e-111 404.1 255 75.7
Phvul.007G085400 Phaseolus vulgaris HOM05D005529 ORTHO05D006800 1.1e-110 403.7 257 77.0
Ciclev10002214m.g Citrus clementina HOM05D005529 ORTHO05D006800 1.4e-110 403.3 255 75.7
RcHm_v2.0_Chr6g0273541 Rosa chinensis HOM05D005529 ORTHO05D006800 1.4e-110 403.3 257 75.9
arahy.Tifrunner.gnm1.ann1.MD2PB3 Arachis hypogaea HOM05D005529 ORTHO05D006800 2.4e-110 402.5 257 76.7
arahy.Tifrunner.gnm1.ann1.PZ5J07 Arachis hypogaea HOM05D005529 ORTHO05D006800 2.4e-110 402.5 257 76.7
Lalb_Chr21g0305631 Lupinus albus HOM05D005529 ORTHO05D006800 4.1e-110 401.7 257 76.3
Sp5g26810 Schrenkiella parvula HOM05D005529 ORTHO05D006800 4.1e-110 401.7 255 75.3
SpUn0095_0040 Schrenkiella parvula HOM05D005529 ORTHO05D006800 4.1e-110 401.7 255 75.3
SGA_v2.0_scaffold161G37858 Striga asiatica HOM05D005529 ORTHO05D006800 4.1e-110 401.7 263 75.3
unitig_32.g11170 Utricularia gibba HOM05D005529 ORTHO05D006800 4.1e-110 401.7 257 74.3
AL2G31360 Arabidopsis lyrata HOM05D005529 ORTHO05D006800 5.4e-110 401.4 255 75.3
Carub.0002s1855 Capsella rubella HOM05D005529 ORTHO05D006800 5.4e-110 401.4 255 75.3
CSS0031927 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.2e-109 400.2 257 75.9
CSS0035962 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.2e-109 400.2 257 75.9
AUR62032105 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.2e-109 400.2 271 72.3
HanXRQChr11g0320531 Helianthus annuus HOM05D005529 ORTHO05D006800 1.6e-109 399.8 257 75.9
AUR62034931 Chenopodium quinoa HOM05D005529 ORTHO05D006800 7.7e-109 397.5 271 71.6
Lalb_Chr06g0161811 Lupinus albus HOM05D005529 ORTHO05D006800 7.7e-109 397.5 257 75.1
Lsat_1_v5_gn_9_42620 Lactuca sativa HOM05D005529 ORTHO05D006800 1.0e-108 397.1 252 76.2
Manes.18G096400 Manihot esculenta HOM05D005529 ORTHO05D006800 1.0e-108 397.1 258 73.3
TPR.G23153 Trifolium pratense HOM05D005529 ORTHO05D006800 1.0e-108 397.1 257 73.9
COL.COLO4_05242 Corchorus olitorius HOM05D005529 ORTHO05D006800 1.7e-108 396.4 257 73.5
VMungo0720G3143 Vigna mungo HOM05D005529 ORTHO05D006800 1.7e-108 396.4 257 76.3
ClCG08G007150 Citrullus lanatus HOM05D005529 ORTHO05D006800 2.9e-108 395.6 255 74.9
FvH4_2g12750 Fragaria vesca HOM05D005529 ORTHO05D006800 5.0e-108 394.8 257 74.3
FAN15G0152 Fragaria x ananassa HOM05D005529 ORTHO05D006800 5.0e-108 394.8 257 74.3
FAN27G2439 Fragaria x ananassa HOM05D005529 ORTHO05D006800 5.0e-108 394.8 257 74.3
ECA232G2783 Erigeron canadensis HOM05D005529 ORTHO05D006800 1.1e-107 393.7 255 72.9
Gohir.A05G247200 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.5e-107 393.3 257 73.2
Gohir.D05G248700 Gossypium hirsutum HOM05D005529 ORTHO05D006800 1.5e-107 393.3 257 73.2
Gorai.009G259800 Gossypium raimondii HOM05D005529 ORTHO05D006800 1.5e-107 393.3 257 73.2
PGSC0003DMG400016963 Solanum tuberosum HOM05D005529 ORTHO05D006800 1.9e-107 392.9 302 65.6
Aa31LG4G8850 Aethionema arabicum HOM05D005529 ORTHO05D006800 2.5e-107 392.5 254 74.4
CDE07G0226 Ceratophyllum demersum HOM05D005529 ORTHO05D006800 5.5e-107 391.3 198 97.0
FAN24G1078 Fragaria x ananassa HOM05D005529 ORTHO05D006800 5.5e-107 391.3 257 73.9
Os03g0381200 Oryza sativa ssp. japonica HOM05D005529 ORTHO05D006800 7.2e-107 391.0 257 73.2
Dinv41017 Davidia involucrata HOM05D005529 ORTHO05D006800 6.1e-106 387.9 230 80.4
ECA247G3042 Erigeron canadensis HOM05D005529 ORTHO05D006800 1.4e-105 386.7 255 73.3
Nn5g28882 Nelumbo nucifera HOM05D005529 ORTHO05D006800 2.3e-105 386.0 248 73.4
TAR381G0607 Trochodendron aralioides HOM05D005529 ORTHO05D006800 4.4e-104 381.7 280 69.6
Cfa018254 Carpinus fangiana HOM05D005529 ORTHO05D006800 4.9e-103 378.3 257 73.9
Lsat_1_v5_gn_1_5401 Lactuca sativa HOM05D005529 ORTHO05D006800 7.7e-101 370.9 248 71.4
vmacro21201 Vaccinium macrocarpon HOM05D005529 ORTHO05D006800 8.6e-100 367.5 251 70.1
ATR0564G028 Amborella trichopoda HOM05D005529 ORTHO05D006800 4.7e-98 361.7 231 75.8
Nitab4.5_0004295g0010 Nicotiana tabacum HOM05D005529 ORTHO05D006800 6.4e-95 351.3 217 76.5
Hma1.2p1_0358F.1_g134920 Hydrangea macrophylla HOM05D005529 ORTHO05D006800 7.0e-94 347.8 213 74.6
MELO3C019956.2 Cucumis melo HOM05D005529 ORTHO05D006800 8.6e-92 340.9 255 67.1
Pp3c1_32040 Physcomitrium patens HOM05D005529 ORTHO05D006800 8.6e-92 340.9 247 67.2
Mapoly0006s0028 Marchantia polymorpha HOM05D005529 ORTHO05D006800 1.1e-91 340.5 247 68.0
SMO141G0273 Selaginella moellendorffii HOM05D005529 ORTHO05D006800 2.8e-90 335.9 251 66.1
Lj7C387G8 Lonicera japonica HOM05D005529 ORTHO05D006800 5.8e-88 328.2 255 64.3
Duzib093G1833 Durio zibethinus HOM05D005529 ORTHO05D006800 1.2e-85 320.5 257 63.0
TAR625G0192 Trochodendron aralioides HOM05D005529 ORTHO05D006800 1.2e-85 320.5 198 77.3
AagrBONN_evm.TU.Sc2ySwM_228.4378 Anthoceros agrestis HOM05D005529 ORTHO05D006800 1.3e-84 317.0 251 63.3
Zm00001eb018520 Zea mays HOM05D005529 ORTHO05D006800 3.2e-70 269.2 170 74.1
MD10G1039400 Malus domestica HOM05D005529 ORTHO05D006800 2.5e-67 259.6 165 75.8
CARHR290990 Cardamine hirsuta HOM05D005529 ORTHO05D006800 1.3e-63 247.3 153 75.8
PRCOL_00004850 Prasinoderma coloniale HOM05D005529 ORTHO05D006800 9.3e-62 241.1 254 51.6
Haze_27340 Corylus avellana HOM05D005529 ORTHO05D006800 3.5e-61 239.2 248 49.6
Dinv13098 Davidia involucrata HOM05D005529 ORTHO05D006800 5.3e-57 225.3 132 79.5
Ca_10643_v3 Cicer arietinum L. HOM05D005529 ORTHO05D006800 3.8e-55 219.2 142 72.5
Cfa022509 Carpinus fangiana HOM05D005529 ORTHO05D006800 1.2e-53 214.2 267 42.3
Glyma.06G212500 Glycine max HOM05D005529 ORTHO05D006800 1.3e-50 204.1 130 74.6
MD10G1040900 Malus domestica HOM05D005529 ORTHO05D006800 5.8e-48 195.3 198 55.6
CSS0032133 Camellia sinensis var. sinensis HOM05D005529 ORTHO05D006800 1.3e-47 194.1 116 73.3
Actinidia02780 Actinidia chinensis HOM05D005529 ORTHO05D006800 2.3e-44 183.3 112 76.8
Glyma.09G074800 Glycine max HOM05D005529 ORTHO05D006800 8.7e-44 181.4 114 75.4
Lsat_1_v5_gn_8_71180 Lactuca sativa HOM05D005529 ORTHO05D006800 1.3e-42 177.6 156 54.5
Glyma.20G171766 Glycine max HOM05D005529 ORTHO05D006800 2.1e-42 176.8 105 81.0
Rhsim06G0089200 Rhododendron simsii HOM05D005529 ORTHO05D006800 7.6e-40 168.3 105 74.3
HPP92_020840 Vanilla planifolia HOM05D005529 ORTHO05D006800 6.5e-39 165.2 105 74.3
BcaC08g46606 Brassica carinata HOM05D005529 ORTHO05D006800 1.9e-38 163.7 105 75.2
AUR62022308 Chenopodium quinoa HOM05D005529 ORTHO05D006800 1.6e-37 160.6 257 41.2
Glyma.04G140500 Glycine max HOM05D005529 ORTHO05D006800 4.6e-37 159.1 104 75.0
Actinidia17753 Actinidia chinensis HOM05D005529 ORTHO05D006800 7.6e-32 141.7 116 62.1
Lsat_1_v5_gn_3_73520 Lactuca sativa HOM05D005529 ORTHO05D006800 1.4e-30 137.5 91 63.7
HPP92_020744 Vanilla planifolia HOM05D005529 ORTHO05D006800 6.3e-26 122.1 102 60.8
HPP92_020745 Vanilla planifolia HOM05D005529 ORTHO05D006800 3.2e-22 109.8 96 56.2
SalBow7G1408 Salvia bowleyana HOM05D005529 ORTHO05D006800 1.1e-19 101.3 79 68.4
MD10G1041000 Malus domestica HOM05D005529 ORTHO05D006800 1.2e-16 91.3 60 71.7
HPP92_020839 Vanilla planifolia HOM05D005529 ORTHO05D006800 2.9e-15 86.7 55 74.5
VMungo0464G1177 Vigna mungo HOM05D005529 ORTHO05D006800 2.2e-07 60.5 40 75.0
Glyma.16G101900 Glycine max HOM05D005529 ORTHO05D006800 8.5e-07 58.5 60 55.0


User provided reference genes

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