Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 3.4e-169 598.2 292 100.0
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.9e-143 512.7 259 97.3
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 1.0e-109 400.6 268 74.3
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 8.8e-109 397.5 273 72.5
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 1.5e-108 396.7 258 75.2
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 2.6e-108 396.0 237 78.1
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 3.3e-108 395.6 258 75.6
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 7.4e-108 394.4 257 74.3
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 9.7e-108 394.0 282 71.3
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 1.7e-107 393.3 258 74.8
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 1.4e-106 390.2 258 74.8
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 1.8e-106 389.8 266 72.2
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 3.1e-106 389.0 270 71.5
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 7.0e-106 387.9 251 75.3
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 2.6e-105 386.0 269 71.0
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 3.5e-105 385.6 246 75.6
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.5e-105 385.6 260 71.9
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 5.9e-105 384.8 257 72.8
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 7.7e-105 384.4 224 80.8
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 7.7e-105 384.4 272 71.7
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 1.7e-104 383.3 268 70.5
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.7e-104 383.3 260 71.5
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 1.7e-104 383.3 249 73.9
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 6.5e-104 381.3 269 70.6
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 6.5e-104 381.3 261 72.0
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 8.5e-104 380.9 251 74.1
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.1e-103 380.6 272 69.5
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.1e-103 380.6 272 69.5
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 1.9e-103 379.8 267 70.4
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 1.9e-103 379.8 223 78.9
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 3.2e-103 379.0 268 70.5
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 4.2e-103 378.6 200 85.5
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 4.2e-103 378.6 243 74.5
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 4.2e-103 378.6 271 70.5
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 5.5e-103 378.3 274 68.6
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 5.5e-103 378.3 268 69.4
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 7.2e-103 377.9 272 68.8
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 9.4e-103 377.5 266 70.7
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 1.2e-102 377.1 251 73.3
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 1.6e-102 376.7 287 67.2
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 1.6e-102 376.7 265 69.4
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 2.1e-102 376.3 270 69.6
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 2.1e-102 376.3 246 73.6
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 2.1e-102 376.3 274 67.5
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 2.7e-102 375.9 267 71.9
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 2.7e-102 375.9 267 71.2
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 4.7e-102 375.2 262 70.6
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 4.7e-102 375.2 273 70.3
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 8.0e-102 374.4 257 71.2
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 1.0e-101 374.0 272 68.4
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 1.0e-101 374.0 261 70.5
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 1.0e-101 374.0 274 69.3
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.4e-101 373.6 272 68.4
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.4e-101 373.6 272 69.5
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 1.4e-101 373.6 271 69.4
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.8e-101 373.2 245 74.3
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 1.8e-101 373.2 272 69.5
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 1.8e-101 373.2 279 67.4
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 3.0e-101 372.5 275 68.7
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 5.2e-101 371.7 260 70.4
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 6.7e-101 371.3 264 69.7
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 6.7e-101 371.3 266 69.2
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 8.8e-101 370.9 264 70.8
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 1.1e-100 370.5 262 71.0
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 1.5e-100 370.2 264 68.9
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 1.5e-100 370.2 206 81.6
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 1.5e-100 370.2 206 81.6
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 1.5e-100 370.2 274 69.3
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 1.5e-100 370.2 274 68.6
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 1.5e-100 370.2 268 67.5
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 2.0e-100 369.8 245 72.7
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 2.0e-100 369.8 228 75.0
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 2.6e-100 369.4 260 70.0
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 3.3e-100 369.0 247 72.5
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 4.4e-100 368.6 266 70.3
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 5.7e-100 368.2 270 66.7
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 7.5e-100 367.9 191 87.4
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 7.5e-100 367.9 260 69.2
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 1.7e-99 366.7 191 86.9
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 1.7e-99 366.7 258 72.1
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 1.7e-99 366.7 246 72.8
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 1.7e-99 366.7 274 66.4
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 2.2e-99 366.3 191 86.4
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 2.2e-99 366.3 191 86.4
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 2.2e-99 366.3 275 65.8
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 2.2e-99 366.3 264 68.6
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 2.8e-99 365.9 191 86.9
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 2.8e-99 365.9 258 69.0
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 3.7e-99 365.5 191 86.4
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 3.7e-99 365.5 190 86.3
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 6.3e-99 364.8 191 85.3
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 6.3e-99 364.8 264 68.6
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 1.1e-98 364.0 217 77.4
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 2.4e-98 362.8 203 81.3
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 9.1e-98 360.9 194 86.1
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 5.9e-97 358.2 245 71.8
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 1.3e-96 357.1 271 67.5
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 2.2e-96 356.3 246 71.1
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 2.2e-96 356.3 271 67.5
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 2.9e-96 355.9 187 85.0
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 3.8e-96 355.5 271 66.8
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 5.0e-96 355.1 271 67.2
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 5.0e-96 355.1 271 67.2
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 8.5e-96 354.4 188 84.6
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 1.4e-90 337.0 276 63.4
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 2.7e-89 332.8 213 70.4
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 5.9e-89 331.6 213 72.8
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 1.7e-88 330.1 214 69.2
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 1.1e-87 327.4 188 78.7
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 2.5e-87 326.2 189 76.7
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 1.8e-85 320.1 186 77.4
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 4.0e-85 318.9 187 77.0
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 3.5e-81 305.8 262 61.5
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 9.5e-79 297.7 162 84.0
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 6.8e-77 291.6 189 65.1
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 3.2e-74 282.7 226 62.8
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 9.2e-58 228.0 130 81.5
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 2.1e-41 173.7 124 68.5
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 2.3e-40 170.2 84 94.0
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 3.9e-40 169.5 84 92.9
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 1.8e-32 144.1 132 54.5
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 8.2e-14 82.0 59 66.1
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 6.7e-08 62.4 128 30.5
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 5.7e-07 59.3 128 31.2
Ciclev10020907m.g Citrus clementina HOM05D000776 ORTHO05D001624 1.3e-06 58.2 156 27.6
Mapoly0065s0029 Marchantia polymorpha HOM05D000776 ORTHO05D001624 3.7e-06 56.6 138 29.7


User provided reference genes

Program Settings